FFCP PHASE1:Mm9::chr11:43409580..43409591,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=131|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:43409580..43409591,+|id=chr11:43409580..43409591,+|ontology_enrichment_celltype=CL:0000473!3.40e-24!3;CL:0000627!3.40e-24!3;CL:0000682!3.40e-24!3;CL:0000066!6.03e-08!25|ontology_enrichment_celltype_v019_2=CL:0000682,2.41e-15,3;CL:0000473,4.05e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!4.30e-26!15;UBERON:0000331!1.76e-25!3;UBERON:0002116!1.76e-25!3;UBERON:0001204!1.76e-25!3;UBERON:0001168!1.76e-25!3;UBERON:0001962!4.76e-17!2;UBERON:0001961!4.76e-17!2;UBERON:0001744!4.76e-17!2;UBERON:0004923!3.24e-16!24;UBERON:0001242!1.03e-15!13;UBERON:0000060!1.03e-15!13;UBERON:0001262!1.03e-15!13;UBERON:0004786!1.03e-15!13;UBERON:0002465!1.07e-11!3;UBERON:0003199!1.44e-09!1|ontology_enrichment_uberon_v019_2=UBERON:0000331,4.74e-34,3;UBERON:0002116,4.74e-34,3;UBERON:0001204,4.74e-34,3;UBERON:0001168,4.74e-34,3;UBERON:0000344,2.06e-26,15;UBERON:0002108,9.28e-26,4;UBERON:0001962,1.40e-22,2;UBERON:0001961,1.40e-22,2;UBERON:0001744,1.40e-22,2;UBERON:0004923,1.37e-16,24;UBERON:0002465,2.04e-15,3;UBERON:0001242,4.48e-14,13;UBERON:0001262,4.48e-14,13;UBERON:0004786,4.48e-14,13;UBERON:0003199,2.01e-12,1|phase1_expression=0,0,1.36499771816861,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,1.83527424853736,1.72269589234506,1.29228598847722,0.215471232685889,13.1116159424898,1.76421090831952,4.21287970245079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr11:43409580..43409591,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=131 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:43409580..43409591,+ | |||
|id=chr11:43409580..43409591,+ | |||
|ontology_enrichment_celltype=CL:0000473!3.40e-24!3;CL:0000627!3.40e-24!3;CL:0000682!3.40e-24!3;CL:0000066!6.03e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,2.41e-15,3;CL:0000473,4.05e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.30e-26!15;UBERON:0000331!1.76e-25!3;UBERON:0002116!1.76e-25!3;UBERON:0001204!1.76e-25!3;UBERON:0001168!1.76e-25!3;UBERON:0001962!4.76e-17!2;UBERON:0001961!4.76e-17!2;UBERON:0001744!4.76e-17!2;UBERON:0004923!3.24e-16!24;UBERON:0001242!1.03e-15!13;UBERON:0000060!1.03e-15!13;UBERON:0001262!1.03e-15!13;UBERON:0004786!1.03e-15!13;UBERON:0002465!1.07e-11!3;UBERON:0003199!1.44e-09!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000331,4.74e-34,3;UBERON:0002116,4.74e-34,3;UBERON:0001204,4.74e-34,3;UBERON:0001168,4.74e-34,3;UBERON:0000344,2.06e-26,15;UBERON:0002108,9.28e-26,4;UBERON:0001962,1.40e-22,2;UBERON:0001961,1.40e-22,2;UBERON:0001744,1.40e-22,2;UBERON:0004923,1.37e-16,24;UBERON:0002465,2.04e-15,3;UBERON:0001242,4.48e-14,13;UBERON:0001262,4.48e-14,13;UBERON:0004786,4.48e-14,13;UBERON:0003199,2.01e-12,1 | |||
|phase1_expression=0,0,1.36499771816861,0,0.500895729946347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11994695955385,1.83527424853736,1.72269589234506,1.29228598847722,0.215471232685889,13.1116159424898,1.76421090831952,4.21287970245079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:43409580..43409591,+ | |||
}} |
Revision as of 19:40, 12 September 2013
Short description: | p@chr11:43409580..43409591, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:43409580..43409591, + |
Coexpression cluster: | MCL_coexpression_mm9:131 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 2.41e-15 | 3 |
defensive cell | 4.05e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
ileal mucosa | 4.74e-34 | 3 |
ileum | 4.74e-34 | 3 |
mucosa of small intestine | 4.74e-34 | 3 |
wall of small intestine | 4.74e-34 | 3 |
mucosa | 2.06e-26 | 15 |
small intestine | 9.28e-26 | 4 |
gut-associated lymphoid tissue | 1.40e-22 | 2 |
mucosa-associated lymphoid tissue | 1.40e-22 | 2 |
lymphoid tissue | 1.40e-22 | 2 |
organ component layer | 1.37e-16 | 24 |
lymphoid system | 2.04e-15 | 3 |
intestinal mucosa | 4.48e-14 | 13 |
wall of intestine | 4.48e-14 | 13 |
gastrointestinal system mucosa | 4.48e-14 | 13 |
egg chamber | 2.01e-12 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.