FFCP PHASE1:Mm9::chr11:78349895..78349994,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=55978|HGNC=|MCL_coexpression_id=1528|UniProt=Q61025|association_with_transcript=0bp_to_ENSMUST00000050366,ENSMUST00000108275,ENSMUST00000137120,ENSMUST00000152016,NM_018854,uc007kjs.1,uc007kjt.1,uc007kju.1_5end|description=CAGE_peak_1_at_Ift20_5end|id=chr11:78349895..78349994,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!5.73e-16!51;UBERON:0000160!9.27e-09!43;UBERON:0005409!5.97e-08!59;UBERON:0002108!6.00e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.73e-16,51|phase1_expression=56.8528407222019,161.924589144664,159.704733025727,168.170101486598,164.293799422402,63.7941233265181,74.9896576311637,42.9980667060449,43.7852925891684,39.7909694747389,40.5786584694447,40.8433454056122,48.2786058406,46.8573356965826,44.3035983214831,69.0440661799307,55.2653883721236,39.9059639178171,42.2312455505675,36.9218997064286,75.51844165415,37.8298524075373,64.2551481281781,125.754044315618,111.492910598645,135.518743531145,119.751834932223,120.232947838726,125.415456841207,93.2511480111744,94.2354670285045,10.1604907753541,9.22597181376855,47.5445043046316,29.7517168343813,38.8989070138872,39.2005164023749,43.9458212273753,37.5040965371424,33.5055196143231,50.5879079706672,47.1301384621327,44.6669524788661,83.3436934998322,75.1203060336603,80.5770241989782,29.7308710852255,41.6428048686653,70.299578475031,97.0205196380674,55.8545822285196,31.6255641602937,29.8653038782771,52.2260742248168,37.9785993030984,81.8085006594311,59.8854889472002,70.1314045497322,58.4694571884238,65.5948814297321,47.5373552629634,42.0167219765724,35.5717918444456,30.5965903875676,46.4767190406478,32.6820852875206,37.4500138148006,33.4269925629752,43.3422579449437,42.7968824511459,42.0649922702764,61.129310662414,72.2240128911776,44.9541233118881,49.6479539874464,54.2339084099912,69.3730050296149,63.4606070283383,60.6745806362162,56.8429900117135,62.0286223624337,54.174990537903,65.6080047653245,57.4017862232314,57.910535907411,55.3901740690495,57.3757873620385,49.58225258953,36.8786561532606,42.9246461406542,55.6539818307221,93.7862025909711,67.3171620370673,114.417076627217,118.909084392923,95.4297269517325,101.962649015652,85.0447309664508,66.5052171783344,74.9079897961921,51.4078482184884,56.4636500622998,68.7974147207943,92.4386714099331,45.0301365303325,35.4703811665138,44.4861511613009,99.1116075961441,96.583830600395,95.5967375577471,44.9326996324292,48.7144765299426,45.6618684566996,56.6717128477861,55.7370471823241,65.4722940827609,175.508427091405,83.5784282997089,56.615075324792,93.6630061195499,73.9819086842318,84.3682940455286,96.9237158334235,65.290117733575,55.2939305987521,149.442377297026,31.511377745057,31.1949420116572,48.1596160606915,70.2518098808618,67.7100892171567,43.3507514789382,84.3047952932541,79.0160763150721,78.5438808435137,61.3271974396124,69.0470886905144,77.7543566313081,193.838355718628,113.638602178696,40.7276986473263,37.2441409182226,53.4784525521887,58.3227645024217,46.7410749169622,57.138719247043,45.257932962349,83.3024853779631,46.9938224593596,63.1614307760516,72.6678142797109,91.8430118871538,76.741040786265,140.345623108433,129.436963800596,46.3749841687089,58.2836945469985,62.0208456146464,46.034486902086,56.3382101296565,39.4003780768242,47.7164462871689,59.4229286318878,48.9942937051036,56.3074962038931,61.8540293036085,56.8739610967193,44.4875954418916,54.1401906215351,58.9361196043952,59.5045062066581,61.5501947060649,50.0574262863595,44.1539117721623,80.5410503000607,46.4099801830573,276.560521357439,184.32204496449,45.4303973640048,40.4091809037163,57.990357594942,70.1858665689232,83.8365225295161,79.1338604628246,121.953968816939,80.2083909505933,77.9139147280835,89.9283253626002,85.1993060710555,109.655967855815,130.76352017419,121.874459231673,94.8339504765408,46.8418901699888,73.2600281875023,55.1895098460802,50.4276466635827,50.7783336005906,63.8689024954999,89.1565293796797,91.3732596036801,64.1665252393363,140.222092612221,64.2353657006962,71.3509152260927,73.5299107498472,74.2468044281921,63.1884158551332,74.0961228683932,94.3643330838659,75.0686099968414,82.3684239564245,66.1333750025831,106.80445198086,79.569606644213,98.2531835214265,111.585191210629,102.278026529034,100.505735450633,45.0989560013754,63.230410859506,50.5840355610061,54.4481376029325,80.0679910571879,108.309856603136,70.0529795809498,83.2313560880688,72.6404182047982,76.6977437242513,77.1796212311126,85.4790660236183,77.8211935168532,39.2057338242108,46.2319831245903,192.279830750443,153.696767691736,71.1239113645918,59.0746900424704,48.0329389953659,40.647819279904,47.957249351271,49.9761592699697,54.5021196263981,47.3158219946053,42.3317480756549,50.1045459496233,52.2205805160614,50.2680075607456,51.7826989109946,71.654653562063,80.1961481426718,41.4892856544705,55.707340098923,74.566495583586,463.28053280647,45.8855402332915,58.9530936081265,171.819227657623,15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| ||
|EntrezGene=55978 | |||
|HGNC= | |||
|MCL_coexpression_id=1528 | |||
|UniProt=Q61025 | |||
|association_with_transcript=0bp_to_ENSMUST00000050366,ENSMUST00000108275,ENSMUST00000137120,ENSMUST00000152016,NM_018854,uc007kjs.1,uc007kjt.1,uc007kju.1_5end | |||
|description=CAGE_peak_1_at_Ift20_5end | |||
|id=chr11:78349895..78349994,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.73e-16!51;UBERON:0000160!9.27e-09!43;UBERON:0005409!5.97e-08!59;UBERON:0002108!6.00e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,5.73e-16,51 | |||
|phase1_expression=56.8528407222019,161.924589144664,159.704733025727,168.170101486598,164.293799422402,63.7941233265181,74.9896576311637,42.9980667060449,43.7852925891684,39.7909694747389,40.5786584694447,40.8433454056122,48.2786058406,46.8573356965826,44.3035983214831,69.0440661799307,55.2653883721236,39.9059639178171,42.2312455505675,36.9218997064286,75.51844165415,37.8298524075373,64.2551481281781,125.754044315618,111.492910598645,135.518743531145,119.751834932223,120.232947838726,125.415456841207,93.2511480111744,94.2354670285045,10.1604907753541,9.22597181376855,47.5445043046316,29.7517168343813,38.8989070138872,39.2005164023749,43.9458212273753,37.5040965371424,33.5055196143231,50.5879079706672,47.1301384621327,44.6669524788661,83.3436934998322,75.1203060336603,80.5770241989782,29.7308710852255,41.6428048686653,70.299578475031,97.0205196380674,55.8545822285196,31.6255641602937,29.8653038782771,52.2260742248168,37.9785993030984,81.8085006594311,59.8854889472002,70.1314045497322,58.4694571884238,65.5948814297321,47.5373552629634,42.0167219765724,35.5717918444456,30.5965903875676,46.4767190406478,32.6820852875206,37.4500138148006,33.4269925629752,43.3422579449437,42.7968824511459,42.0649922702764,61.129310662414,72.2240128911776,44.9541233118881,49.6479539874464,54.2339084099912,69.3730050296149,63.4606070283383,60.6745806362162,56.8429900117135,62.0286223624337,54.174990537903,65.6080047653245,57.4017862232314,57.910535907411,55.3901740690495,57.3757873620385,49.58225258953,36.8786561532606,42.9246461406542,55.6539818307221,93.7862025909711,67.3171620370673,114.417076627217,118.909084392923,95.4297269517325,101.962649015652,85.0447309664508,66.5052171783344,74.9079897961921,51.4078482184884,56.4636500622998,68.7974147207943,92.4386714099331,45.0301365303325,35.4703811665138,44.4861511613009,99.1116075961441,96.583830600395,95.5967375577471,44.9326996324292,48.7144765299426,45.6618684566996,56.6717128477861,55.7370471823241,65.4722940827609,175.508427091405,83.5784282997089,56.615075324792,93.6630061195499,73.9819086842318,84.3682940455286,96.9237158334235,65.290117733575,55.2939305987521,149.442377297026,31.511377745057,31.1949420116572,48.1596160606915,70.2518098808618,67.7100892171567,43.3507514789382,84.3047952932541,79.0160763150721,78.5438808435137,61.3271974396124,69.0470886905144,77.7543566313081,193.838355718628,113.638602178696,40.7276986473263,37.2441409182226,53.4784525521887,58.3227645024217,46.7410749169622,57.138719247043,45.257932962349,83.3024853779631,46.9938224593596,63.1614307760516,72.6678142797109,91.8430118871538,76.741040786265,140.345623108433,129.436963800596,46.3749841687089,58.2836945469985,62.0208456146464,46.034486902086,56.3382101296565,39.4003780768242,47.7164462871689,59.4229286318878,48.9942937051036,56.3074962038931,61.8540293036085,56.8739610967193,44.4875954418916,54.1401906215351,58.9361196043952,59.5045062066581,61.5501947060649,50.0574262863595,44.1539117721623,80.5410503000607,46.4099801830573,276.560521357439,184.32204496449,45.4303973640048,40.4091809037163,57.990357594942,70.1858665689232,83.8365225295161,79.1338604628246,121.953968816939,80.2083909505933,77.9139147280835,89.9283253626002,85.1993060710555,109.655967855815,130.76352017419,121.874459231673,94.8339504765408,46.8418901699888,73.2600281875023,55.1895098460802,50.4276466635827,50.7783336005906,63.8689024954999,89.1565293796797,91.3732596036801,64.1665252393363,140.222092612221,64.2353657006962,71.3509152260927,73.5299107498472,74.2468044281921,63.1884158551332,74.0961228683932,94.3643330838659,75.0686099968414,82.3684239564245,66.1333750025831,106.80445198086,79.569606644213,98.2531835214265,111.585191210629,102.278026529034,100.505735450633,45.0989560013754,63.230410859506,50.5840355610061,54.4481376029325,80.0679910571879,108.309856603136,70.0529795809498,83.2313560880688,72.6404182047982,76.6977437242513,77.1796212311126,85.4790660236183,77.8211935168532,39.2057338242108,46.2319831245903,192.279830750443,153.696767691736,71.1239113645918,59.0746900424704,48.0329389953659,40.647819279904,47.957249351271,49.9761592699697,54.5021196263981,47.3158219946053,42.3317480756549,50.1045459496233,52.2205805160614,50.2680075607456,51.7826989109946,71.654653562063,80.1961481426718,41.4892856544705,55.707340098923,74.566495583586,463.28053280647,45.8855402332915,58.9530936081265,171.819227657623,156.214701333929,201.98489219916,98.202751403924,113.786057326459,121.209108650805,249.036965253423,288.846987495497,241.337171200757,145.367711656867,44.2950291317023,49.1562998374467,45.8681254967608,82.995229344584,57.2563904502647,75.0343533945672,43.8429526725023,81.4310826981075,120.32061625065,404.669610430855,114.925718300212,88.805434682748,105.366679849488,94.7816411384904,107.512289333015,110.471237082713,78.9911786564771,68.1774814383432,51.8031038587688,55.1879691561741,48.2223249932009,65.7499235338131,55.593096089185,31.2760311188694,32.6086883914123,31.5095940274086,215.755559671416,61.6855187483214,73.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| |||
|short_description=p1@Ift20 | |||
}} | |||
Revision as of 21:04, 12 September 2013
| Short description: | p1@Ift20 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Ift20_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1528 |
| Association with transcript: | 0bp_to_ENSMUST00000050366, ENSMUST00000108275, ENSMUST00000137120, ENSMUST00000152016, NM_018854, uc007kjs.1, uc007kjt.1, uc007kju.1_5end |
| EntrezGene: | Ift20 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 5.73e-16 | 51 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
