FFCP PHASE1:Hg19::chr3:123419588..123419611,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4638|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=7590|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_BC034911_5end|coexpression_cluster_id=C1918|description=CAGE_peak_15_at_MYLK_5end|id=chr3:123419588..123419611,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0005795;4.86e-08;10!UBERON:0007297;1.45e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060084;2.39e-10;3!DOID:127;2.39e-10;3!DOID:0060072;7.52e-08;4|ontology_enrichment_disease_v019_2=DOID:0060084,1.73e-10,3;DOID:127,1.73e-10,3;DOID:0060072,5.92e-08,4|ontology_enrichment_uberon=UBERON:0007023!2.06e-47!115;UBERON:0001049!2.62e-24!57;UBERON:0005068!2.62e-24!57;UBERON:0006241!2.62e-24!57;UBERON:0007135!2.62e-24!57;UBERON:0002020!4.85e-23!34;UBERON:0003528!4.85e-23!34;UBERON:0001893!7.54e-23!34;UBERON:0002616!7.54e-23!59;UBERON:0002780!4.94e-22!41;UBERON:0001890!4.94e-22!41;UBERON:0006240!4.94e-22!41;UBERON:0002791!6.01e-22!33;UBERON:0001869!2.04e-21!32;UBERON:0003080!2.99e-21!42;UBERON:0005743!2.56e-20!86;UBERON:0000955!3.82e-20!69;UBERON:0006238!3.82e-20!69;UBERON:0003075!6.17e-20!86;UBERON:0007284!6.17e-20!86;UBERON:0000073!6.94e-19!94;UBERON:0001016!6.94e-19!94;UBERON:0001017!9.75e-19!82;UBERON:0002346!2.44e-18!90;UBERON:0003056!2.28e-17!61;UBERON:0000062!5.93e-15!511;UBERON:0000033!6.74e-15!123;UBERON:0000956!2.46e-14!25;UBERON:0000203!2.46e-14!25;UBERON:0000153!4.32e-14!129;UBERON:0007811!4.32e-14!129;UBERON:0002619!5.91e-14!22;UBERON:0001950!5.07e-12!20;UBERON:0004121!2.29e-11!169;UBERON:0002308!8.55e-11!9;UBERON:0000125!8.55e-11!9;UBERON:0000924!1.07e-10!173;UBERON:0006601!1.07e-10!173;UBERON:0000064!1.65e-10!219;UBERON:0000475!9.74e-10!365;UBERON:0005156!6.57e-09!59;UBERON:0000990!6.57e-09!59;UBERON:0009663!1.02e-08!7;UBERON:0000467!1.40e-08!625;UBERON:0000480!1.68e-08!626;UBERON:0002420!1.79e-08!9;UBERON:0007245!1.79e-08!9;UBERON:0010009!1.79e-08!9;UBERON:0010011!1.79e-08!9;UBERON:0000454!1.79e-08!9;UBERON:0003133!2.88e-08!48;UBERON:0000477!3.05e-08!286;UBERON:0000468!4.83e-08!659;UBERON:0004111!5.66e-08!241;UBERON:0000481!1.28e-07!347;UBERON:0000200!1.31e-07!6;UBERON:0002050!7.62e-07!605;UBERON:0005423!7.62e-07!605;UBERON:0000025!9.40e-07!194|ontology_enrichment_uberon_v019=UBERON:0002791;7.35e-21;32!UBERON:0001869;8.26e-21;32!UBERON:0003528;1.24e-19;34!UBERON:0002020;1.24e-19;34!UBERON:0001893;1.05e-18;34!UBERON:0002780;8.65e-17;41!UBERON:0001890;8.65e-17;41!UBERON:0002619;8.03e-16;22!UBERON:0001950;1.45e-14;20!UBERON:0000956;1.09e-13;25!UBERON:0000203;1.09e-13;25!UBERON:0007023;2.06e-12;114!UBERON:0000125;3.76e-12;9!UBERON:0002308;3.76e-12;9!UBERON:0002420;7.60e-12;9!UBERON:0007245;7.60e-12;9!UBERON:0010009;7.60e-12;9!UBERON:0010011;7.60e-12;9!UBERON:0000454;7.60e-12;9!UBERON:0000073;3.79e-11;53!UBERON:0002616;3.79e-11;53!UBERON:0009663;4.90e-11;7!UBERON:0004175;6.05e-11;21!UBERON:0006947;1.92e-10;3!UBERON:0004054;1.92e-10;3!UBERON:0003135;7.93e-10;11!UBERON:0003133;1.02e-08;44!UBERON:0000200;6.23e-08;6!UBERON:0005904;6.39e-08;4!UBERON:0001017;9.56e-08;75!UBERON:0000369;1.44e-07;4!UBERON:0002435;1.44e-07;4!UBERON:0000204;1.44e-07;4!UBERON:0001875;2.56e-07;2!UBERON:0006514;2.56e-07;2!UBERON:0000955;4.40e-07;68!UBERON:0000059;4.75e-07;11!UBERON:0004921;8.57e-07;33!UBERON:0002702;9.29e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.06e-46,114;UBERON:0003528,1.86e-23,34;UBERON:0002020,1.86e-23,34;UBERON:0002791,4.02e-22,32;UBERON:0001869,4.02e-22,32;UBERON:0002780,4.99e-21,41;UBERON:0001890,4.99e-21,41;UBERON:0003080,4.99e-21,41;UBERON:0006240,4.99e-21,41;UBERON:0001893,1.31e-20,34;UBERON:0000073,3.05e-19,53;UBERON:0002616,3.05e-19,53;UBERON:0001049,6.07e-18,56;UBERON:0005068,6.07e-18,56;UBERON:0006241,6.07e-18,56;UBERON:0007135,6.07e-18,56;UBERON:0003056,5.35e-16,61;UBERON:0002619,8.01e-16,22;UBERON:0003075,1.08e-14,82;UBERON:0007284,1.08e-14,82;UBERON:0001950,1.46e-14,20;UBERON:0002346,9.68e-14,86;UBERON:0000956,1.09e-13,25;UBERON:0000203,1.09e-13,25;UBERON:0000955,1.27e-13,68;UBERON:0006238,1.27e-13,68;UBERON:0000125,2.57e-12,9;UBERON:0002308,2.57e-12,9;UBERON:0002420,4.07e-12,9;UBERON:0007245,4.07e-12,9;UBERON:0010009,4.07e-12,9;UBERON:0010011,4.07e-12,9;UBERON:0000454,4.07e-12,9;UBERON:0001017,5.70e-12,81;UBERON:0001016,2.04e-11,89;UBERON:0009663,3.01e-11,7;UBERON:0003133,3.27e-11,48;UBERON:0006947,2.03e-10,3;UBERON:0004054,2.03e-10,3;UBERON:0010371,2.24e-10,104;UBERON:0005156,7.57e-10,59;UBERON:0000990,7.57e-10,59;UBERON:0011216,9.17e-10,223;UBERON:0003135,9.29e-10,11;UBERON:0004175,6.40e-09,25;UBERON:0002050,1.08e-08,564;UBERON:0000923,3.71e-08,560;UBERON:0010316,3.71e-08,560;UBERON:0005291,3.71e-08,560;UBERON:0006598,3.71e-08,560;UBERON:0010317,3.71e-08,560;UBERON:0002532,3.71e-08,560;UBERON:0005423,5.01e-08,581;UBERON:0000200,6.63e-08,6;UBERON:0005904,6.65e-08,4;UBERON:0010314,8.20e-08,132;UBERON:0000369,1.13e-07,4;UBERON:0002435,1.13e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3.42276043712026,5.69654649642034,0.665756774185513,0.805095174364105,0|short_description=p15@MYLK}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=4638 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7590 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_BC034911_5end | |||
|coexpression_cluster_id=C1918 | |||
|description=CAGE_peak_15_at_MYLK_5end | |||
|id=chr3:123419588..123419611,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005795;4.86e-08;10!UBERON:0007297;1.45e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060084;2.39e-10;3!DOID:127;2.39e-10;3!DOID:0060072;7.52e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.73e-10,3;DOID:127,1.73e-10,3;DOID:0060072,5.92e-08,4 | |||
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|short_description=p15@MYLK | |||
}} |
Revision as of 21:13, 12 September 2013
Short description: | p15@MYLK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_MYLK_5end |
Coexpression cluster: | C1918_smooth_leiomyoma_bladder_Mesenchymal_cervix_esophagus_prostate |
Association with transcript: | 0bp_to_BC034911_5end |
EntrezGene: | MYLK |
HGNC: | 7590 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.73e-10 | 3 |
leiomyoma | 1.73e-10 | 3 |
benign neoplasm | 5.92e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.