FFCP PHASE1:Mm9::chr11:84339149..84339160,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=78365|HGNC=|UniProt=|association_with_transcript=-1bp_to_ENSMUST00000134800,NR_038057_5end|description=CAGE_peak_1_at_1500016L03Rik_5end|id=chr11:84339149..84339160,+|ontology_enrichment_celltype=CL:0000117!1.06e-24!23;CL:0000337!1.06e-24!23;CL:0000540!5.53e-15!33;CL:0000047!5.53e-15!33;CL:0000031!5.53e-15!33;CL:0000404!5.53e-15!33;CL:0000393!1.32e-11!39;CL:0000211!1.32e-11!39;CL:0002319!6.65e-10!43;CL:0000221!1.57e-09!44;CL:0000133!1.57e-09!44;CL:0000055!1.27e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.58e-42,23;CL:0000337,5.58e-42,23;CL:0000540,2.89e-28,33;CL:0000047,2.89e-28,33;CL:0000031,2.89e-28,33;CL:0000404,2.89e-28,33;CL:0000393,2.09e-23,39;CL:0000211,2.09e-23,39;CL:0002319,6.41e-21,43;CL:0000221,2.28e-20,44;CL:0000133,2.28e-20,44;CL:0000120,6.48e-12,3;CL:0002612,8.99e-12,3;CL:0002321,1.49e-11,70;CL:0002613,5.68e-11,3;CL:0002610,6.14e-11,3;CL:0002614,6.64e-11,3;CL:0002611,1.17e-08,2;CL:0000723,4.15e-08,91;CL:0000048,4.15e-08,91;CL:0000034,2.13e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000489!1.43e-15!21;UBERON:0002113!2.59e-11!14;UBERON:0003918!2.59e-11!14;UBERON:0005095!2.59e-11!14;UBERON:0007687!2.59e-11!14;UBERON:0006554!1.76e-09!16;UBERON:0003076!7.76e-09!12;UBERON:0003057!7.76e-09!12;UBERON:0001008!9.93e-09!17;UBERON:0001017!1.48e-08!73;UBERON:0005743!1.48e-08!73;UBERON:0001948!2.82e-08!5;UBERON:0002315!2.82e-08!5;UBERON:0001049!4.04e-08!52;UBERON:0005068!4.04e-08!52;UBERON:0006241!4.04e-08!52;UBERON:0007135!4.04e-08!52;UBERON:0000073!4.18e-08!75;UBERON:0001016!4.18e-08!75;UBERON:0002298!6.19e-08!6;UBERON:0002020!6.22e-07!34;UBERON:0002616!8.52e-07!49;UBERON:0002240!9.72e-07!6;UBERON:0005174!9.72e-07!6;UBERON:0001137!9.72e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001948,8.86e-19,5;UBERON:0002315,8.86e-19,5;UBERON:0000489,7.66e-18,21;UBERON:0002240,1.32e-15,6;UBERON:0005174,1.32e-15,6;UBERON:0001137,1.32e-15,6;UBERON:0002420,4.72e-15,8;UBERON:0007245,4.72e-15,8;UBERON:0010009,4.72e-15,8;UBERON:0010011,4.72e-15,8;UBERON:0000454,4.72e-15,8;UBERON:0003076,2.15e-14,12;UBERON:0003057,2.15e-14,12;UBERON:0001017,3.38e-14,73;UBERON:0000073,8.32e-14,54;UBERON:0001016,1.01e-13,75;UBERON:0002257,8.99e-12,3;UBERON:0004684,6.14e-11,3;UBERON:0002275,6.14e-11,3;UBERON:0002038,6.64e-11,3;UBERON:0009663,6.64e-11,3;UBERON:0009661,6.64e-11,3;UBERON:0000125,6.64e-11,3;UBERON:0002308,6.64e-11,3;UBERON:0002020,8.51e-11,34;UBERON:0004121,4.80e-10,95;UBERON:0000924,4.80e-10,95;UBERON:0006601,4.80e-10,95;UBERON:0001049,3.40e-09,52;UBERON:0005068,3.40e-09,52;UBERON:0006241,3.40e-09,52;UBERON:0007135,3.40e-09,52;UBERON:0002256,1.17e-08,2;UBERON:0002950,2.72e-08,4;UBERON:0001891,2.72e-08,4;UBERON:0009616,2.72e-08,4;UBERON:0010286,2.72e-08,4;UBERON:0003103,1.03e-07,43;UBERON:0002113,1.10e-07,14;UBERON:0003918,1.10e-07,14;UBERON:0011143,1.10e-07,14;UBERON:0005095,1.10e-07,14;UBERON:0007687,1.10e-07,14;UBERON:0002346,5.26e-07,64;UBERON:0003075,5.26e-07,64;UBERON:0007284,5.26e-07,64;UBERON:0000369,9.35e-07,5;UBERON:0002435,9.35e-07,5;UBERON:0000204,9.35e-07,5;UBERON:0010082,9.35e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05791152148994,9.52183762689659,5.07065122804943,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,6.85562362569129,5.74258206474195,0.122490799214954,0.287536413054709,0,2.20231761998777,2.68143409978894,2.61131106535614,3.16527090552465,3.84248103130121,1.56274011167028,2.23346399201105,3.37657566019008,1.83357897332172,3.24091444021034,5.41012387036591,5.96478226640962,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,2.34224637609238,5.65506108396329,0,0,0,0,0.599162557619291,0,0,0,0,0.41557608911912,0.486723789203273,0.509196819251581,0.373220911830279,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948339504765408,1.82797620175566,1.1270773567308,1.83286195060783,1.16371492300575,1.05203729835478,0.69560190836683,0.738050739898011,0.941992367048249,1.23397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0.496375471371293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93408612825759,1.99512436700516,0.853668028770671,0.486213434136588,0.419226325255965,0.551530525350042,0,0,0,0,0,0.377252682772152,0.37456602987953,0.256100609619477,0.17230640686684,0,0.463537303779422,0.77163688185482,0,0.147198920134397,0,0.887379030796687,0.238436189947321,0.581385666529314,0.0941093804153306,0.25384382367503,0,0.789209134313529,0.407412341537585,0,0.355905054372522,0.29551344712669,0,0,0,0.249810577937946,0,0,0,0,0|short_description=p1@1500016L03Rik}} | ||
|EntrezGene=78365 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=-1bp_to_ENSMUST00000134800,NR_038057_5end | |||
|description=CAGE_peak_1_at_1500016L03Rik_5end | |||
|id=chr11:84339149..84339160,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.06e-24!23;CL:0000337!1.06e-24!23;CL:0000540!5.53e-15!33;CL:0000047!5.53e-15!33;CL:0000031!5.53e-15!33;CL:0000404!5.53e-15!33;CL:0000393!1.32e-11!39;CL:0000211!1.32e-11!39;CL:0002319!6.65e-10!43;CL:0000221!1.57e-09!44;CL:0000133!1.57e-09!44;CL:0000055!1.27e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.58e-42,23;CL:0000337,5.58e-42,23;CL:0000540,2.89e-28,33;CL:0000047,2.89e-28,33;CL:0000031,2.89e-28,33;CL:0000404,2.89e-28,33;CL:0000393,2.09e-23,39;CL:0000211,2.09e-23,39;CL:0002319,6.41e-21,43;CL:0000221,2.28e-20,44;CL:0000133,2.28e-20,44;CL:0000120,6.48e-12,3;CL:0002612,8.99e-12,3;CL:0002321,1.49e-11,70;CL:0002613,5.68e-11,3;CL:0002610,6.14e-11,3;CL:0002614,6.64e-11,3;CL:0002611,1.17e-08,2;CL:0000723,4.15e-08,91;CL:0000048,4.15e-08,91;CL:0000034,2.13e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.43e-15!21;UBERON:0002113!2.59e-11!14;UBERON:0003918!2.59e-11!14;UBERON:0005095!2.59e-11!14;UBERON:0007687!2.59e-11!14;UBERON:0006554!1.76e-09!16;UBERON:0003076!7.76e-09!12;UBERON:0003057!7.76e-09!12;UBERON:0001008!9.93e-09!17;UBERON:0001017!1.48e-08!73;UBERON:0005743!1.48e-08!73;UBERON:0001948!2.82e-08!5;UBERON:0002315!2.82e-08!5;UBERON:0001049!4.04e-08!52;UBERON:0005068!4.04e-08!52;UBERON:0006241!4.04e-08!52;UBERON:0007135!4.04e-08!52;UBERON:0000073!4.18e-08!75;UBERON:0001016!4.18e-08!75;UBERON:0002298!6.19e-08!6;UBERON:0002020!6.22e-07!34;UBERON:0002616!8.52e-07!49;UBERON:0002240!9.72e-07!6;UBERON:0005174!9.72e-07!6;UBERON:0001137!9.72e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001948,8.86e-19,5;UBERON:0002315,8.86e-19,5;UBERON:0000489,7.66e-18,21;UBERON:0002240,1.32e-15,6;UBERON:0005174,1.32e-15,6;UBERON:0001137,1.32e-15,6;UBERON:0002420,4.72e-15,8;UBERON:0007245,4.72e-15,8;UBERON:0010009,4.72e-15,8;UBERON:0010011,4.72e-15,8;UBERON:0000454,4.72e-15,8;UBERON:0003076,2.15e-14,12;UBERON:0003057,2.15e-14,12;UBERON:0001017,3.38e-14,73;UBERON:0000073,8.32e-14,54;UBERON:0001016,1.01e-13,75;UBERON:0002257,8.99e-12,3;UBERON:0004684,6.14e-11,3;UBERON:0002275,6.14e-11,3;UBERON:0002038,6.64e-11,3;UBERON:0009663,6.64e-11,3;UBERON:0009661,6.64e-11,3;UBERON:0000125,6.64e-11,3;UBERON:0002308,6.64e-11,3;UBERON:0002020,8.51e-11,34;UBERON:0004121,4.80e-10,95;UBERON:0000924,4.80e-10,95;UBERON:0006601,4.80e-10,95;UBERON:0001049,3.40e-09,52;UBERON:0005068,3.40e-09,52;UBERON:0006241,3.40e-09,52;UBERON:0007135,3.40e-09,52;UBERON:0002256,1.17e-08,2;UBERON:0002950,2.72e-08,4;UBERON:0001891,2.72e-08,4;UBERON:0009616,2.72e-08,4;UBERON:0010286,2.72e-08,4;UBERON:0003103,1.03e-07,43;UBERON:0002113,1.10e-07,14;UBERON:0003918,1.10e-07,14;UBERON:0011143,1.10e-07,14;UBERON:0005095,1.10e-07,14;UBERON:0007687,1.10e-07,14;UBERON:0002346,5.26e-07,64;UBERON:0003075,5.26e-07,64;UBERON:0007284,5.26e-07,64;UBERON:0000369,9.35e-07,5;UBERON:0002435,9.35e-07,5;UBERON:0000204,9.35e-07,5;UBERON:0010082,9.35e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.05791152148994,9.52183762689659,5.07065122804943,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0.210324961351382,6.85562362569129,5.74258206474195,0.122490799214954,0.287536413054709,0,2.20231761998777,2.68143409978894,2.61131106535614,3.16527090552465,3.84248103130121,1.56274011167028,2.23346399201105,3.37657566019008,1.83357897332172,3.24091444021034,5.41012387036591,5.96478226640962,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,2.34224637609238,5.65506108396329,0,0,0,0,0.599162557619291,0,0,0,0,0.41557608911912,0.486723789203273,0.509196819251581,0.373220911830279,0,0,0,0,0,0,0,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0.796137067273973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948339504765408,1.82797620175566,1.1270773567308,1.83286195060783,1.16371492300575,1.05203729835478,0.69560190836683,0.738050739898011,0.941992367048249,1.23397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.325773918707152,0,0,0.242780636154981,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0,0,0,0,0,0,0.496375471371293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93408612825759,1.99512436700516,0.853668028770671,0.486213434136588,0.419226325255965,0.551530525350042,0,0,0,0,0,0.377252682772152,0.37456602987953,0.256100609619477,0.17230640686684,0,0.463537303779422,0.77163688185482,0,0.147198920134397,0,0.887379030796687,0.238436189947321,0.581385666529314,0.0941093804153306,0.25384382367503,0,0.789209134313529,0.407412341537585,0,0.355905054372522,0.29551344712669,0,0,0,0.249810577937946,0,0,0,0,0 | |||
|short_description=p1@1500016L03Rik | |||
}} |
Revision as of 21:14, 12 September 2013
Short description: | p1@1500016L03Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_1500016L03Rik_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENSMUST00000134800, NR_038057_5end |
EntrezGene: | 1500016L03Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.58e-42 | 23 |
neuroblast (sensu Vertebrata) | 5.58e-42 | 23 |
neuron | 2.89e-28 | 33 |
neuronal stem cell | 2.89e-28 | 33 |
neuroblast | 2.89e-28 | 33 |
electrically signaling cell | 2.89e-28 | 33 |
electrically responsive cell | 2.09e-23 | 39 |
electrically active cell | 2.09e-23 | 39 |
neural cell | 6.41e-21 | 43 |
ectodermal cell | 2.28e-20 | 44 |
neurectodermal cell | 2.28e-20 | 44 |
granule cell | 6.48e-12 | 3 |
neuron of the ventral spinal cord | 8.99e-12 | 3 |
embryonic cell | 1.49e-11 | 70 |
striatum neuron | 5.68e-11 | 3 |
raphe nuclei neuron | 6.14e-11 | 3 |
neuron of the substantia nigra | 6.64e-11 | 3 |
neuron of the dorsal spinal cord | 1.17e-08 | 2 |
somatic stem cell | 4.15e-08 | 91 |
multi fate stem cell | 4.15e-08 | 91 |
stem cell | 2.13e-07 | 97 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.