FFCP PHASE1:Hg19::chr3:14474180..14474192,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6533|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11052|TSSclassifier=S|UniProt=C9JPV1|association_with_transcript=2bp_to_ENST00000452775_5end|coexpression_cluster_id=C26|description=CAGE_peak_10_at_SLC6A6_5end|id=chr3:14474180..14474192,+|ontology_enrichment_celltype=CL:0000766!6.91e-81!76;CL:0002057!9.21e-73!42;CL:0000738!5.96e-70!140;CL:0000839!1.66e-68!70;CL:0000557!2.46e-67!71;CL:0000860!4.66e-67!45;CL:0002194!7.01e-62!63;CL:0000576!7.01e-62!63;CL:0000040!7.01e-62!63;CL:0000559!7.01e-62!63;CL:0002009!1.45e-59!65;CL:0002031!4.82e-57!124;CL:0000037!1.14e-56!172;CL:0000566!1.14e-56!172;CL:0002087!7.06e-56!119;CL:0000988!1.89e-52!182;CL:0000763!1.49e-51!112;CL:0000049!1.49e-51!112;CL:0002032!1.18e-50!165;CL:0000837!1.18e-50!165;CL:0000134!1.38e-17!358;CL:0002320!7.20e-17!365;CL:0002393!1.40e-14!9;CL:0002397!1.40e-14!9;CL:0000219!2.36e-14!390;CL:0000048!2.25e-11!430;CL:0000034!5.51e-11!444;CL:0000723!5.90e-11!436;CL:0002274!1.07e-10!5;CL:0000457!1.07e-10!5;CL:0002191!1.07e-10!5;CL:0000097!1.07e-10!5;CL:0000831!1.07e-10!5;CL:0002028!1.07e-10!5;CL:0000094!1.78e-10!8;CL:0000767!6.83e-08!3;CL:0000081!2.39e-07!11;CL:0000842!3.57e-07!3|ontology_enrichment_celltype_v019=CL:0000860;1.16e-68;33!CL:0002057;1.16e-68;33!CL:0000473;5.96e-49;39!CL:0000234;5.96e-49;39!CL:0000576;8.35e-43;48!CL:0000766;3.62e-39;69!CL:0000094;4.68e-24;8!CL:0000081;2.40e-17;11!CL:0000763;5.80e-17;100!CL:0000767;6.82e-17;3!CL:0002393;1.83e-14;6!CL:0002397;1.83e-14;6!CL:0000738;2.31e-13;136!CL:0000771;1.98e-12;2!CL:0002087;1.05e-10;104|ontology_enrichment_celltype_v019_2=CL:0000766,3.87e-83,72;CL:0000860,6.07e-80,42;CL:0002057,6.07e-80,42;CL:0000473,4.54e-75,48;CL:0000234,4.54e-75,48;CL:0000839,9.79e-61,66;CL:0000557,9.36e-60,67;CL:0002194,6.38e-59,59;CL:0000576,6.38e-59,59;CL:0000040,6.38e-59,59;CL:0000559,6.38e-59,59;CL:0002009,7.75e-57,61;CL:0000763,1.48e-53,108;CL:0000049,1.48e-53,108;CL:0000738,1.59e-49,136;CL:0000037,6.72e-39,168;CL:0002032,1.95e-38,161;CL:0000837,1.95e-38,161;CL:0000988,1.35e-36,177;CL:0002031,7.45e-36,120;CL:0002087,5.51e-35,115;CL:0000094,4.09e-24,8;CL:0000081,2.18e-17,11;CL:0000767,8.04e-17,3;CL:0000134,5.81e-15,354;CL:0002320,1.54e-14,361;CL:0000219,4.79e-13,386;CL:0000771,1.73e-12,2;CL:0000048,3.23e-11,427;CL:0000723,5.78e-11,433;CL:0000034,1.22e-10,441;CL:0002393,1.67e-09,9;CL:0002397,1.67e-09,9|ontology_enrichment_development_v019=CL:0002057;6.35e-57;42!CL:0000049;1.71e-16;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.31e-60!80;UBERON:0001474!2.49e-55!86;UBERON:0002390!1.09e-52!102;UBERON:0003061!1.09e-52!102;UBERON:0002193!2.48e-48!112;UBERON:0004765!7.13e-45!101;UBERON:0001434!7.13e-45!101;UBERON:0002405!3.75e-39!115;UBERON:0002204!2.86e-21!167;UBERON:0003081!1.90e-17!216;UBERON:0002384!1.38e-16!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.49e-52,76;UBERON:0001474,7.05e-48,82;UBERON:0004765,3.84e-43,90;UBERON:0002390,3.42e-42,98;UBERON:0003061,3.42e-42,98;UBERON:0002405,1.42e-41,93;UBERON:0001434,2.82e-38,100;UBERON:0002193,9.27e-38,108;UBERON:0002204,1.34e-20,167;UBERON:0003081,2.72e-17,203;UBERON:0002384,5.82e-14,371;UBERON:0000926,5.91e-09,315;UBERON:0004120,5.91e-09,315;UBERON:0006603,5.91e-09,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,2.30297638858328,4.33485145285013,0,0,0,0,0,0.293600439334847,2.21598163412751,1.00272223735071,4.34021741431704,0,0,0,2.32637182047304,3.40088349319928,2.91100873425379,2.32429036905685,1.23350366406548,3.40677007984614,0.863077176966451,0.512321413058201,0.945928919554341,2.06847408441971,0.645484683583826,1.35426486594342,3.76484679085209,1.63743690034707,3.37085226667627,3.06083892370903,2.88836124368484,2.55734850319616,0.989553900560148,1.39624560335142,1.70489900213078,0.870627715885752,2.26954089876456,1.24564449799115,0.502497330513487,1.5644487552606,1.08594422352558,0,1.10483290796269,2.21523671208619,0.633765858935825,1.06302149982522,0.838634582033504,0,0.300353785683013,0.32145117339416,0,0.79566670879636,0.182664153764634,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0,1.17903228824749,0.411202997999018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0,0.127986611154418,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0.324547393654683,0.174129737299267,0.132957960518865,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.445893486866185,0,0,0,0,0,0,0.492663237895943,0.176096868026452,2.28060927094849,1.29707958075265,0.6312121671319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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6533 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11052 | |||
|TSSclassifier=S | |||
|UniProt=C9JPV1 | |||
|association_with_transcript=2bp_to_ENST00000452775_5end | |||
|coexpression_cluster_id=C26 | |||
|description=CAGE_peak_10_at_SLC6A6_5end | |||
|id=chr3:14474180..14474192,+ | |||
|ontology_enrichment_celltype=CL:0000766!6.91e-81!76;CL:0002057!9.21e-73!42;CL:0000738!5.96e-70!140;CL:0000839!1.66e-68!70;CL:0000557!2.46e-67!71;CL:0000860!4.66e-67!45;CL:0002194!7.01e-62!63;CL:0000576!7.01e-62!63;CL:0000040!7.01e-62!63;CL:0000559!7.01e-62!63;CL:0002009!1.45e-59!65;CL:0002031!4.82e-57!124;CL:0000037!1.14e-56!172;CL:0000566!1.14e-56!172;CL:0002087!7.06e-56!119;CL:0000988!1.89e-52!182;CL:0000763!1.49e-51!112;CL:0000049!1.49e-51!112;CL:0002032!1.18e-50!165;CL:0000837!1.18e-50!165;CL:0000134!1.38e-17!358;CL:0002320!7.20e-17!365;CL:0002393!1.40e-14!9;CL:0002397!1.40e-14!9;CL:0000219!2.36e-14!390;CL:0000048!2.25e-11!430;CL:0000034!5.51e-11!444;CL:0000723!5.90e-11!436;CL:0002274!1.07e-10!5;CL:0000457!1.07e-10!5;CL:0002191!1.07e-10!5;CL:0000097!1.07e-10!5;CL:0000831!1.07e-10!5;CL:0002028!1.07e-10!5;CL:0000094!1.78e-10!8;CL:0000767!6.83e-08!3;CL:0000081!2.39e-07!11;CL:0000842!3.57e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.16e-68;33!CL:0002057;1.16e-68;33!CL:0000473;5.96e-49;39!CL:0000234;5.96e-49;39!CL:0000576;8.35e-43;48!CL:0000766;3.62e-39;69!CL:0000094;4.68e-24;8!CL:0000081;2.40e-17;11!CL:0000763;5.80e-17;100!CL:0000767;6.82e-17;3!CL:0002393;1.83e-14;6!CL:0002397;1.83e-14;6!CL:0000738;2.31e-13;136!CL:0000771;1.98e-12;2!CL:0002087;1.05e-10;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.87e-83,72;CL:0000860,6.07e-80,42;CL:0002057,6.07e-80,42;CL:0000473,4.54e-75,48;CL:0000234,4.54e-75,48;CL:0000839,9.79e-61,66;CL:0000557,9.36e-60,67;CL:0002194,6.38e-59,59;CL:0000576,6.38e-59,59;CL:0000040,6.38e-59,59;CL:0000559,6.38e-59,59;CL:0002009,7.75e-57,61;CL:0000763,1.48e-53,108;CL:0000049,1.48e-53,108;CL:0000738,1.59e-49,136;CL:0000037,6.72e-39,168;CL:0002032,1.95e-38,161;CL:0000837,1.95e-38,161;CL:0000988,1.35e-36,177;CL:0002031,7.45e-36,120;CL:0002087,5.51e-35,115;CL:0000094,4.09e-24,8;CL:0000081,2.18e-17,11;CL:0000767,8.04e-17,3;CL:0000134,5.81e-15,354;CL:0002320,1.54e-14,361;CL:0000219,4.79e-13,386;CL:0000771,1.73e-12,2;CL:0000048,3.23e-11,427;CL:0000723,5.78e-11,433;CL:0000034,1.22e-10,441;CL:0002393,1.67e-09,9;CL:0002397,1.67e-09,9 | |||
|ontology_enrichment_development_v019=CL:0002057;6.35e-57;42!CL:0000049;1.71e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.31e-60!80;UBERON:0001474!2.49e-55!86;UBERON:0002390!1.09e-52!102;UBERON:0003061!1.09e-52!102;UBERON:0002193!2.48e-48!112;UBERON:0004765!7.13e-45!101;UBERON:0001434!7.13e-45!101;UBERON:0002405!3.75e-39!115;UBERON:0002204!2.86e-21!167;UBERON:0003081!1.90e-17!216;UBERON:0002384!1.38e-16!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.49e-52,76;UBERON:0001474,7.05e-48,82;UBERON:0004765,3.84e-43,90;UBERON:0002390,3.42e-42,98;UBERON:0003061,3.42e-42,98;UBERON:0002405,1.42e-41,93;UBERON:0001434,2.82e-38,100;UBERON:0002193,9.27e-38,108;UBERON:0002204,1.34e-20,167;UBERON:0003081,2.72e-17,203;UBERON:0002384,5.82e-14,371;UBERON:0000926,5.91e-09,315;UBERON:0004120,5.91e-09,315;UBERON:0006603,5.91e-09,315 | |||
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|short_description=p10@SLC6A6 | |||
}} |
Revision as of 21:55, 12 September 2013
Short description: | p10@SLC6A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_SLC6A6_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 2bp_to_ENST00000452775_5end |
EntrezGene: | SLC6A6 |
HGNC: | 11052 |
UniProt: | C9JPV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.49e-52 | 76 |
bone element | 7.05e-48 | 82 |
skeletal element | 3.84e-43 | 90 |
hematopoietic system | 3.42e-42 | 98 |
blood island | 3.42e-42 | 98 |
immune system | 1.42e-41 | 93 |
skeletal system | 2.82e-38 | 100 |
hemolymphoid system | 9.27e-38 | 108 |
musculoskeletal system | 1.34e-20 | 167 |
lateral plate mesoderm | 2.72e-17 | 203 |
connective tissue | 5.82e-14 | 371 |
mesoderm | 5.91e-09 | 315 |
mesoderm-derived structure | 5.91e-09 | 315 |
presumptive mesoderm | 5.91e-09 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.