FFCP PHASE1:Mm9::chr12:102017350..102017366,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=217830|HGNC=|UniProt=D6RI81|association_with_transcript=4bp_to_ENSMUST00000154603_5end|description=CAGE_peak_3_at_9030617O03Rik_5end|id=chr12:102017350..102017366,+|ontology_enrichment_celltype=CL:0000223!4.82e-07!20|ontology_enrichment_celltype_v019_2=CL:0000223,6.09e-09,20;CL:0000066,9.74e-09,25;CL:0002076,1.11e-07,15;CL:0002321,1.12e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.68e-07!15;UBERON:0004535!3.72e-07!23;UBERON:0001009!3.72e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.49e-09,15;UBERON:0004535,1.34e-08,23;UBERON:0001009,1.34e-08,23;UBERON:0001242,7.95e-08,13;UBERON:0001262,7.95e-08,13;UBERON:0004786,7.95e-08,13;UBERON:0000160,2.27e-07,31;UBERON:0003914,3.34e-07,47|phase1_expression=0.320297694209588,1.74487703819681,2.72999543633722,8.77146212789807,7.51343594919521,1.17515490338323,2.33612640595526,0.774739940649458,0.140788722151667,0,0.513653904676515,0.797721589953364,0.684802919724823,0.524522414513984,0,0.607425802169478,0,0.473193248037357,0.274228867211478,0,2.04103896362567,4.26951090163807,3.13439746966722,6.55968933452967,2.98232065387321,2.29692785646008,2.15380998079537,2.37018355954478,4.3705386474966,2.77233142735924,1.10865255327652,0,0,0,3.75507105676657,3.82339684324532,3.06254034393554,0.837063261473815,0,0.523523743973798,0,0,0.485510353031154,8.56098362233926,5.98123894195136,5.87349606917381,1.56478268869608,4.36050312760893,3.73466510648602,3.30530828426282,3.3596741190087,4.31257693094915,0.503347818173209,0,0.672187598284928,1.80081605225163,2.29226751951005,2.57836046138721,0,0.528990979272033,0.633831403506179,6.09920157724438,6.22506357277798,1.7997994345628,0,1.4209602298922,0.898800331555214,0,0.207379224616955,0.135005938331691,0,1.14260393761521,0.220868540951614,0.489963196859816,0.0958454710182364,0,1.10115880999389,1.27687338085188,1.0752457327937,0,0.0914876436024097,0,0.558365998002762,0,0.30559649555362,0,0.284743361598206,0,0.681535739998656,1.13357340160178,1.15945795480671,5.16254326188832,0.679971333707751,3.2382191498269,7.14754059192436,5.82434953226536,4.77511028447956,5.96506129023202,3.37721805983729,3.5333957451034,0,1.28326477414318,2.54805239706646,0,5.19578498426914,5.06719730950197,6.57181778519218,2.05530983494308,1.55362730188303,1.33597925158342,0,0.304465478312141,0.461230994512117,0.301445281105245,1.29347577849275,1.75933227861546,0,3.61498392299779,0.884610551949874,0.808834249737046,0.662524555381181,0.969750506270444,3.72783522436244,0.292780797011547,0.41889341362691,4.08731288333746,0.11981512450592,0.599902730993408,0.381210681219194,1.04853447583376,1.37250180845588,0.125654352112864,0.695297280769106,0.255715457330331,0.83115217823824,0.486723789203273,0.611036183101898,0.870848794270651,0.758168275301024,1.26265113531884,0,0,0,0.30140963567143,0.0680364991513279,0.384341160854549,0.281105173679186,1.03481348295606,0,0,0.175951124163949,0.219195732427575,0,1.39300866608867,0,0,0.702213187313235,0,0.568326998791185,0.207125772535502,0.469052119962192,1.08037236876609,1.18372367792605,0.590292695242212,1.23413690309903,1.62773761325285,1.60964040839772,2.10177616260905,2.46839774870221,6.895033491322,8.83650024049827,7.60239934611728,10.3188554186794,12.3469905259542,1.05144974282064,0.411618449517138,12.5559137533843,4.49565963328025,0,0,0.38660238396628,0.80673409849337,0.22237804384487,0.190225626112559,3.79623249235609,0.164698954724011,2.26201687920243,1.39269530428806,0.974820435595601,3.59527763461689,3.8904848977445,5.17767310461355,0,0.114248512609729,0,0.203651327845314,0,0.49095073923223,2.02356918797623,4.13308414342886,10.8329122210549,10.2419646055094,11.5616524563988,0.333690211432188,0,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0.274561413188081,0,2.23284568601102,1.87222603868736,4.79899868099512,7.89348619496414,2.8946611281802,0.739012760666419,0.189491411770485,0.162964976442026,0.339490171550376,0.704070744865506,0.670025029767263,0.238043640886014,0,0.472905432318573,0.221464689648775,0.797273843287435,1.14704320301017,1.55416483679306,0.723245292907558,0,1.08781136763742,0.491764273019036,0.827810238914197,1.60550589987792,0.468846746368813,0.819674726883377,4.29200576247434,2.52406575533005,1.95219372148319,1.93881057959519,2.86762557543062,2.67358408898873,0.566153061577665,4.85772842009873,4.67609372658099,1.97643888973262,0.321321316421807,1.84522110770749,0.178065603667255,0.325773918707152,0.989820737835213,0,0.242780636154981,2.11626489875326,2.82907619633847,1.18120757152309,0,0.258428293168221,1.09060118843252,1.78248689192361,1.58018378967908,1.05418608574999,1.03135543248187,1.36175842301515,0.18006109403131,0.129358683782755,0.214337035031592,0.709360934569094,0.178368817602071,0.658196082408484,0.304464949114599,0,0.21183207086382,5.07215315526412,0.98931751764888,0.322928853391811,0.603129249281559,0.358117032009409,0.164140899745061,1.1659233465194,0.927126510052548,0.341741761595705,0.619160603889667,0.925972636848558,0,0.27338845544205,0,0.169978429993855,0.559805809294632,0.276399947608848,0.954670618015114,0,1.21991680276109,1.08005340821801,0.418176592028937,0.87345025498471,0.539457385539283,1.07449492442937,0.26175594198403,1.55537967950151,1.86401793926078,0,0.299033092087958,0,0.194451188344048,0.387479470433193,0.675824501963113,0.821500670520278,0.5208175393758,0.209718688851422,0,0.864090018773596,3.47612232690996,0.608175645870493,0.308132871494482,0.649604114888975,0.358053391334963,0.39736270956253,0.120195449519969,0.295379054349154,0.605798699688886,0.533447646584999,0.504130925684203,0.779663045918019,0.865906574762965,1.63627663054197,10.4295976462997,0,0,0,4.82973985080476,0.375364950902364,1.46521299413812,3.21552568618599,1.00314420807073,0,0,0.572895513439397,1.20297227640581,0,0,0,0.45032120322422,0.906284817968409,0,0,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0.888986911206461,0.412070114477788,0.320919209591815,0,0.50695859978048,0.943131706930381,0.468207537349412,0.640251524048693,0.459483751644906,0,0.347652977834566,0.192909220463705,1.64834360321323,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.726732083161643,0.376437521661322,0.423073039458382,0.365855945745545,0.789209134313529,0.135804113845862,0,0.474540072496697,0.492522411877817,0,0.309873682371932,0.385813221962283,0.499621155875892,0,0.644613162144895,1.14772999241306,0.220591419119515,1.15933917810211|short_description=p3@9030617O03Rik}} | ||
|EntrezGene=217830 | |||
|HGNC= | |||
|UniProt=D6RI81 | |||
|association_with_transcript=4bp_to_ENSMUST00000154603_5end | |||
|description=CAGE_peak_3_at_9030617O03Rik_5end | |||
|id=chr12:102017350..102017366,+ | |||
|ontology_enrichment_celltype=CL:0000223!4.82e-07!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,6.09e-09,20;CL:0000066,9.74e-09,25;CL:0002076,1.11e-07,15;CL:0002321,1.12e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!3.68e-07!15;UBERON:0004535!3.72e-07!23;UBERON:0001009!3.72e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,4.49e-09,15;UBERON:0004535,1.34e-08,23;UBERON:0001009,1.34e-08,23;UBERON:0001242,7.95e-08,13;UBERON:0001262,7.95e-08,13;UBERON:0004786,7.95e-08,13;UBERON:0000160,2.27e-07,31;UBERON:0003914,3.34e-07,47 | |||
|phase1_expression=0.320297694209588,1.74487703819681,2.72999543633722,8.77146212789807,7.51343594919521,1.17515490338323,2.33612640595526,0.774739940649458,0.140788722151667,0,0.513653904676515,0.797721589953364,0.684802919724823,0.524522414513984,0,0.607425802169478,0,0.473193248037357,0.274228867211478,0,2.04103896362567,4.26951090163807,3.13439746966722,6.55968933452967,2.98232065387321,2.29692785646008,2.15380998079537,2.37018355954478,4.3705386474966,2.77233142735924,1.10865255327652,0,0,0,3.75507105676657,3.82339684324532,3.06254034393554,0.837063261473815,0,0.523523743973798,0,0,0.485510353031154,8.56098362233926,5.98123894195136,5.87349606917381,1.56478268869608,4.36050312760893,3.73466510648602,3.30530828426282,3.3596741190087,4.31257693094915,0.503347818173209,0,0.672187598284928,1.80081605225163,2.29226751951005,2.57836046138721,0,0.528990979272033,0.633831403506179,6.09920157724438,6.22506357277798,1.7997994345628,0,1.4209602298922,0.898800331555214,0,0.207379224616955,0.135005938331691,0,1.14260393761521,0.220868540951614,0.489963196859816,0.0958454710182364,0,1.10115880999389,1.27687338085188,1.0752457327937,0,0.0914876436024097,0,0.558365998002762,0,0.30559649555362,0,0.284743361598206,0,0.681535739998656,1.13357340160178,1.15945795480671,5.16254326188832,0.679971333707751,3.2382191498269,7.14754059192436,5.82434953226536,4.77511028447956,5.96506129023202,3.37721805983729,3.5333957451034,0,1.28326477414318,2.54805239706646,0,5.19578498426914,5.06719730950197,6.57181778519218,2.05530983494308,1.55362730188303,1.33597925158342,0,0.304465478312141,0.461230994512117,0.301445281105245,1.29347577849275,1.75933227861546,0,3.61498392299779,0.884610551949874,0.808834249737046,0.662524555381181,0.969750506270444,3.72783522436244,0.292780797011547,0.41889341362691,4.08731288333746,0.11981512450592,0.599902730993408,0.381210681219194,1.04853447583376,1.37250180845588,0.125654352112864,0.695297280769106,0.255715457330331,0.83115217823824,0.486723789203273,0.611036183101898,0.870848794270651,0.758168275301024,1.26265113531884,0,0,0,0.30140963567143,0.0680364991513279,0.384341160854549,0.281105173679186,1.03481348295606,0,0,0.175951124163949,0.219195732427575,0,1.39300866608867,0,0,0.702213187313235,0,0.568326998791185,0.207125772535502,0.469052119962192,1.08037236876609,1.18372367792605,0.590292695242212,1.23413690309903,1.62773761325285,1.60964040839772,2.10177616260905,2.46839774870221,6.895033491322,8.83650024049827,7.60239934611728,10.3188554186794,12.3469905259542,1.05144974282064,0.411618449517138,12.5559137533843,4.49565963328025,0,0,0.38660238396628,0.80673409849337,0.22237804384487,0.190225626112559,3.79623249235609,0.164698954724011,2.26201687920243,1.39269530428806,0.974820435595601,3.59527763461689,3.8904848977445,5.17767310461355,0,0.114248512609729,0,0.203651327845314,0,0.49095073923223,2.02356918797623,4.13308414342886,10.8329122210549,10.2419646055094,11.5616524563988,0.333690211432188,0,0.224862112384854,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.324270453550071,0.274561413188081,0,2.23284568601102,1.87222603868736,4.79899868099512,7.89348619496414,2.8946611281802,0.739012760666419,0.189491411770485,0.162964976442026,0.339490171550376,0.704070744865506,0.670025029767263,0.238043640886014,0,0.472905432318573,0.221464689648775,0.797273843287435,1.14704320301017,1.55416483679306,0.723245292907558,0,1.08781136763742,0.491764273019036,0.827810238914197,1.60550589987792,0.468846746368813,0.819674726883377,4.29200576247434,2.52406575533005,1.95219372148319,1.93881057959519,2.86762557543062,2.67358408898873,0.566153061577665,4.85772842009873,4.67609372658099,1.97643888973262,0.321321316421807,1.84522110770749,0.178065603667255,0.325773918707152,0.989820737835213,0,0.242780636154981,2.11626489875326,2.82907619633847,1.18120757152309,0,0.258428293168221,1.09060118843252,1.78248689192361,1.58018378967908,1.05418608574999,1.03135543248187,1.36175842301515,0.18006109403131,0.129358683782755,0.214337035031592,0.709360934569094,0.178368817602071,0.658196082408484,0.304464949114599,0,0.21183207086382,5.07215315526412,0.98931751764888,0.322928853391811,0.603129249281559,0.358117032009409,0.164140899745061,1.1659233465194,0.927126510052548,0.341741761595705,0.619160603889667,0.925972636848558,0,0.27338845544205,0,0.169978429993855,0.559805809294632,0.276399947608848,0.954670618015114,0,1.21991680276109,1.08005340821801,0.418176592028937,0.87345025498471,0.539457385539283,1.07449492442937,0.26175594198403,1.55537967950151,1.86401793926078,0,0.299033092087958,0,0.194451188344048,0.387479470433193,0.675824501963113,0.821500670520278,0.5208175393758,0.209718688851422,0,0.864090018773596,3.47612232690996,0.608175645870493,0.308132871494482,0.649604114888975,0.358053391334963,0.39736270956253,0.120195449519969,0.295379054349154,0.605798699688886,0.533447646584999,0.504130925684203,0.779663045918019,0.865906574762965,1.63627663054197,10.4295976462997,0,0,0,4.82973985080476,0.375364950902364,1.46521299413812,3.21552568618599,1.00314420807073,0,0,0.572895513439397,1.20297227640581,0,0,0,0.45032120322422,0.906284817968409,0,0,0,0.170733605754134,0,0.209613162627982,0.367687016900028,0.888986911206461,0.412070114477788,0.320919209591815,0,0.50695859978048,0.943131706930381,0.468207537349412,0.640251524048693,0.459483751644906,0,0.347652977834566,0.192909220463705,1.64834360321323,0.441596760403192,0.342869252385415,0.354951612318675,0.238436189947321,0.726732083161643,0.376437521661322,0.423073039458382,0.365855945745545,0.789209134313529,0.135804113845862,0,0.474540072496697,0.492522411877817,0,0.309873682371932,0.385813221962283,0.499621155875892,0,0.644613162144895,1.14772999241306,0.220591419119515,1.15933917810211 | |||
|short_description=p3@9030617O03Rik | |||
}} | |||
Revision as of 21:58, 12 September 2013
| Short description: | p3@9030617O03Rik |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_9030617O03Rik_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 4bp_to_ENSMUST00000154603_5end |
| EntrezGene: | 9030617O03Rik |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endodermal cell | 6.09e-09 | 20 |
| epithelial cell | 9.74e-09 | 25 |
| endo-epithelial cell | 1.11e-07 | 15 |
| embryonic cell | 1.12e-07 | 70 |
| Ontology term | p-value | n |
|---|---|---|
| mucosa | 4.49e-09 | 15 |
| cardiovascular system | 1.34e-08 | 23 |
| circulatory system | 1.34e-08 | 23 |
| intestinal mucosa | 7.95e-08 | 13 |
| wall of intestine | 7.95e-08 | 13 |
| gastrointestinal system mucosa | 7.95e-08 | 13 |
| intestine | 2.27e-07 | 31 |
| epithelial tube | 3.34e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
