FFCP PHASE1:Mm9::chr12:115045984..115045990,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=100047361|HGNC=|MCL_coexpression_id=419|UniProt=|association_with_transcript=-26bp_to_ENSMUST00000103456_5end|description=CAGE_peak_1_at_LOC100047361_5end|id=chr12:115045984..115045990,-|ontology_enrichment_celltype=CL:0000553!4.23e-31!6;CL:0000556!4.23e-31!6;CL:0000050!8.65e-21!9;CL:0000414!4.98e-17!11;CL:0000839!2.02e-14!13;CL:0002031!4.47e-14!25;CL:0000763!1.01e-11!16;CL:0000988!6.63e-11!32;CL:0002032!6.63e-11!32;CL:0000037!6.63e-11!32;CL:0000566!6.63e-11!32;CL:0000837!6.63e-11!32;CL:0002027!9.09e-11!3;CL:0002006!9.09e-11!3;CL:0002024!9.09e-11!3;CL:0000049!7.15e-10!19;CL:0000945!1.24e-08!1;CL:0000236!1.24e-08!1;CL:0000826!1.24e-08!1;CL:0000815!2.44e-08!1;CL:0000792!2.44e-08!1;CL:0002320!1.94e-07!46;CL:0000134!1.94e-07!46|ontology_enrichment_celltype_v019_2=CL:0000553,1.36e-33,6;CL:0000556,1.36e-33,6;CL:0000050,1.27e-22,9;CL:0000839,7.56e-16,13;CL:0000945,2.06e-13,1;CL:0000236,2.06e-13,1;CL:0000826,2.06e-13,1;CL:0000763,5.60e-13,16;CL:0002031,9.64e-13,25;CL:0000049,5.23e-11,19;CL:0000988,5.04e-10,32;CL:0002032,5.04e-10,32;CL:0000037,5.04e-10,32;CL:0000837,5.04e-10,32;CL:0002320,4.78e-07,46;CL:0000134,4.78e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001962!2.90e-16!2;UBERON:0001961!2.90e-16!2;UBERON:0001744!2.90e-16!2;UBERON:0002371!1.01e-11!16;UBERON:0002465!3.67e-11!3;UBERON:0000331!1.77e-10!3;UBERON:0002116!1.77e-10!3;UBERON:0001204!1.77e-10!3;UBERON:0001168!1.77e-10!3;UBERON:0002193!2.43e-09!48;UBERON:0003199!7.41e-09!1;UBERON:0001474!1.60e-08!22;UBERON:0004765!1.60e-08!22;UBERON:0001434!1.60e-08!22;UBERON:0000344!3.50e-08!15;UBERON:0002384!1.94e-07!46|ontology_enrichment_uberon_v019_2=UBERON:0001962,3.19e-26,2;UBERON:0001961,3.19e-26,2;UBERON:0001744,3.19e-26,2;UBERON:0002465,7.36e-18,3;UBERON:0003199,8.69e-14,1;UBERON:0002371,5.60e-13,16;UBERON:0002193,1.24e-09,48;UBERON:0002405,1.24e-09,48;UBERON:0001474,1.43e-09,22;UBERON:0004765,1.43e-09,22;UBERON:0001434,1.43e-09,22;UBERON:0002384,4.78e-07,46|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,2.42970320867791,0.699561878128147,4.41647031501533,5.21034847701807,1.27316895539409,0,0,0,7.35965144849671,3.67054849707472,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@LOC100047361}} | ||
|EntrezGene=100047361 | |||
|HGNC= | |||
|MCL_coexpression_id=419 | |||
|UniProt= | |||
|association_with_transcript=-26bp_to_ENSMUST00000103456_5end | |||
|description=CAGE_peak_1_at_LOC100047361_5end | |||
|id=chr12:115045984..115045990,- | |||
|ontology_enrichment_celltype=CL:0000553!4.23e-31!6;CL:0000556!4.23e-31!6;CL:0000050!8.65e-21!9;CL:0000414!4.98e-17!11;CL:0000839!2.02e-14!13;CL:0002031!4.47e-14!25;CL:0000763!1.01e-11!16;CL:0000988!6.63e-11!32;CL:0002032!6.63e-11!32;CL:0000037!6.63e-11!32;CL:0000566!6.63e-11!32;CL:0000837!6.63e-11!32;CL:0002027!9.09e-11!3;CL:0002006!9.09e-11!3;CL:0002024!9.09e-11!3;CL:0000049!7.15e-10!19;CL:0000945!1.24e-08!1;CL:0000236!1.24e-08!1;CL:0000826!1.24e-08!1;CL:0000815!2.44e-08!1;CL:0000792!2.44e-08!1;CL:0002320!1.94e-07!46;CL:0000134!1.94e-07!46 | |||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.36e-33,6;CL:0000556,1.36e-33,6;CL:0000050,1.27e-22,9;CL:0000839,7.56e-16,13;CL:0000945,2.06e-13,1;CL:0000236,2.06e-13,1;CL:0000826,2.06e-13,1;CL:0000763,5.60e-13,16;CL:0002031,9.64e-13,25;CL:0000049,5.23e-11,19;CL:0000988,5.04e-10,32;CL:0002032,5.04e-10,32;CL:0000037,5.04e-10,32;CL:0000837,5.04e-10,32;CL:0002320,4.78e-07,46;CL:0000134,4.78e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001962!2.90e-16!2;UBERON:0001961!2.90e-16!2;UBERON:0001744!2.90e-16!2;UBERON:0002371!1.01e-11!16;UBERON:0002465!3.67e-11!3;UBERON:0000331!1.77e-10!3;UBERON:0002116!1.77e-10!3;UBERON:0001204!1.77e-10!3;UBERON:0001168!1.77e-10!3;UBERON:0002193!2.43e-09!48;UBERON:0003199!7.41e-09!1;UBERON:0001474!1.60e-08!22;UBERON:0004765!1.60e-08!22;UBERON:0001434!1.60e-08!22;UBERON:0000344!3.50e-08!15;UBERON:0002384!1.94e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,3.19e-26,2;UBERON:0001961,3.19e-26,2;UBERON:0001744,3.19e-26,2;UBERON:0002465,7.36e-18,3;UBERON:0003199,8.69e-14,1;UBERON:0002371,5.60e-13,16;UBERON:0002193,1.24e-09,48;UBERON:0002405,1.24e-09,48;UBERON:0001474,1.43e-09,22;UBERON:0004765,1.43e-09,22;UBERON:0001434,1.43e-09,22;UBERON:0002384,4.78e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,2.42970320867791,0.699561878128147,4.41647031501533,5.21034847701807,1.27316895539409,0,0,0,7.35965144849671,3.67054849707472,0,0,0,0,0.252030129759931,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17447824240415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@LOC100047361 | |||
}} |
Revision as of 22:28, 12 September 2013
Short description: | p1@LOC100047361 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LOC100047361_5end |
Coexpression cluster: | MCL_coexpression_mm9:419 |
Association with transcript: | -26bp_to_ENSMUST00000103456_5end |
EntrezGene: | LOC100047361 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.36e-33 | 6 |
megakaryocyte | 1.36e-33 | 6 |
megakaryocyte-erythroid progenitor cell | 1.27e-22 | 9 |
myeloid lineage restricted progenitor cell | 7.56e-16 | 13 |
lymphocyte of B lineage | 2.06e-13 | 1 |
B cell | 2.06e-13 | 1 |
pro-B cell | 2.06e-13 | 1 |
myeloid cell | 5.60e-13 | 16 |
hematopoietic lineage restricted progenitor cell | 9.64e-13 | 25 |
common myeloid progenitor | 5.23e-11 | 19 |
hematopoietic cell | 5.04e-10 | 32 |
hematopoietic oligopotent progenitor cell | 5.04e-10 | 32 |
hematopoietic stem cell | 5.04e-10 | 32 |
hematopoietic multipotent progenitor cell | 5.04e-10 | 32 |
connective tissue cell | 4.78e-07 | 46 |
mesenchymal cell | 4.78e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 3.19e-26 | 2 |
mucosa-associated lymphoid tissue | 3.19e-26 | 2 |
lymphoid tissue | 3.19e-26 | 2 |
lymphoid system | 7.36e-18 | 3 |
egg chamber | 8.69e-14 | 1 |
bone marrow | 5.60e-13 | 16 |
hemolymphoid system | 1.24e-09 | 48 |
immune system | 1.24e-09 | 48 |
bone element | 1.43e-09 | 22 |
skeletal element | 1.43e-09 | 22 |
skeletal system | 1.43e-09 | 22 |
connective tissue | 4.78e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.