FFCP PHASE1:Mm9::chr12:31950320..31950331,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=16777|HGNC=|MCL_coexpression_id=2779|UniProt=|association_with_transcript=161bp_to_ENSMUST00000164228_5end|description=CAGE_peak_3_at_Lamb1_5end|id=chr12:31950320..31950331,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!6.62e-10!333;UBERON:0007100!3.84e-09!18;UBERON:0000948!3.84e-09!18;UBERON:0005498!3.84e-09!18;UBERON:0004140!3.84e-09!18;UBERON:0009881!3.84e-09!18;UBERON:0004141!3.84e-09!18;UBERON:0003084!3.84e-09!18;UBERON:0007005!3.84e-09!18;UBERON:0004139!3.84e-09!18;UBERON:0004291!3.84e-09!18;UBERON:0004535!1.22e-07!23;UBERON:0001009!1.22e-07!23;UBERON:0003103!1.39e-07!43;UBERON:0000922!4.77e-07!328|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.88e-10,18;UBERON:0000948,9.88e-10,18;UBERON:0005498,9.88e-10,18;UBERON:0004140,9.88e-10,18;UBERON:0009881,9.88e-10,18;UBERON:0004141,9.88e-10,18;UBERON:0003084,9.88e-10,18;UBERON:0007005,9.88e-10,18;UBERON:0004139,9.88e-10,18;UBERON:0004291,9.88e-10,18;UBERON:0004535,2.80e-08,23;UBERON:0001009,2.80e-08,23;UBERON:0003103,8.05e-08,43|phase1_expression=8.80818659076367,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,3.85232338634155,2.20256102594018,3.12956537739216,0.436050312760893,0,0,0.55994568650145,0,0,0,0,10.5476368774738,6.30373567865265,9.7977697532714,0.606949382578793,0.528990979272033,0.633831403506179,2.37191172448392,0,0.449949858640699,0,0,0.898800331555214,0.768436610643109,0.933206510776299,0.945041568321835,1.05162480675691,2.28520787523043,1.98781686856452,0.489963196859816,0.575072826109418,0.919218786610021,0,0,0,0.659431438650969,0.640413505216868,0.52091337055676,0,0,0,2.06240009831567,2.27794689278565,1.4911955666024,2.57469057332826,2.41828992341714,0,0,0,0,0,0,0.280888840263504,0,0.519572009205738,0.35333957451034,10.4224130634744,0,0,0,1.5154372870785,1.26679932737549,0,0.68510327831436,1.29468941823586,0.148442139064825,4.51061849591953,3.34912026143355,8.99400439298628,3.61734337326294,5.29149182110672,1.0053327306374,0.741584903203122,1.44599356919912,0,5.01477234836968,2.20841518460394,0.484875253135222,0,0,1.04723353406728,1.27728527604296,0,0,0,0,0,0.376963056338593,0,0.511430914660661,0,0,5.09196819251581,1.61729061793121,0,0.210441855886474,2.47228841629137,2.06911893990126,3.24111833649629,1.9591626318643,2.38127747029647,1.7935920839879,2.06143794031403,1.81092359517311,3.01795190105979,2.45837904218165,4.57472922826267,6.57587197282724,5.83899223373756,5.92028683087683,4.52720700097476,10.9468846750171,0,0,0,5.17814431338755,5.15957331958412,6.84235833551856,8.75955521665278,8.46086196513836,6.01641740260775,6.51095045301142,6.17028823219124,6.53885917256149,4.93679549740441,7.05920095540109,6.16122952548504,3.50879969820798,5.92785311285837,3.62357330653004,0.210289948564127,1.3377599609307,0,0.264450566663544,7.03851226766272,6.27039014023184,6.05677068213839,3.42861991859682,6.22658522765637,2.66315876557583,1.42358718463353,2.9645811850322,4.02136334080431,3.78017296878187,3.31438948102504,2.69645822596266,2.59365659849633,2.19055400579804,10.2420666514664,10.2823661348756,7.88954149711563,9.16430975303914,7.75809948670503,9.11765658574141,5.6280518040589,1.18088118383682,2.66897837330337,1.23397163921801,0.296452627087149,1.16791574001266,0.982794975566015,0.899448449539415,0.608580364165509,0.482354319504834,0.50925170356284,0.863088412352432,0.486405680325106,0.549122826376163,1.43768206527355,1.48856379067401,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,1.29327233116623,4.54779388249163,4.88894929326078,5.43184274480602,6.33663670378956,5.86271901046355,4.04674189506223,5.65887578787617,3.78324345854858,5.09368786192182,3.82691444777969,1.3109065177259,0.863424909329478,1.15719246865209,0,0,0.983528546038072,2.75936746304733,0.160550589987792,0,0.983609672260053,4.29200576247434,3.47059041357882,3.51394869866975,3.44677436372478,3.82350076724083,4.01037613348309,2.83076530788832,4.04810701674894,3.21481443702443,3.16230222357219,0,2.12910127812403,7.83488656135923,9.93610452056814,2.47455184458803,0,4.61283208694465,4.53485335447127,3.39489143560617,4.13422650033082,4.30409207121498,3.87642439752332,1.81766864738753,2.13898427030833,0.632073515871632,3.16255825724996,0,0.340439605753788,3.42116078659489,5.82114077022395,5.78709994585299,6.38424841112185,3.74574516964348,3.78462747384878,2.74018454203139,5.63212099352905,4.44847348814022,0,0.98931751764888,5.9741837877485,3.25689794612042,3.22305328808468,2.1338316966858,2.62332752966866,0,0,4.95328483111734,2.77791791054568,0,0,0,0,0,0,0,4.74503990371703,5.28630614529807,2.91614420218863,1.88179466413022,4.36725127492355,2.69728692769641,4.05001933054146,2.35580347785627,1.42576470620972,1.24267862617385,0.56369293868419,11.3632574993424,6.9492565991981,8.36140109879405,5.42471258606471,8.44780627453891,10.2100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| ||
|EntrezGene=16777 | |||
|HGNC= | |||
|MCL_coexpression_id=2779 | |||
|UniProt= | |||
|association_with_transcript=161bp_to_ENSMUST00000164228_5end | |||
|description=CAGE_peak_3_at_Lamb1_5end | |||
|id=chr12:31950320..31950331,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!6.62e-10!333;UBERON:0007100!3.84e-09!18;UBERON:0000948!3.84e-09!18;UBERON:0005498!3.84e-09!18;UBERON:0004140!3.84e-09!18;UBERON:0009881!3.84e-09!18;UBERON:0004141!3.84e-09!18;UBERON:0003084!3.84e-09!18;UBERON:0007005!3.84e-09!18;UBERON:0004139!3.84e-09!18;UBERON:0004291!3.84e-09!18;UBERON:0004535!1.22e-07!23;UBERON:0001009!1.22e-07!23;UBERON:0003103!1.39e-07!43;UBERON:0000922!4.77e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,9.88e-10,18;UBERON:0000948,9.88e-10,18;UBERON:0005498,9.88e-10,18;UBERON:0004140,9.88e-10,18;UBERON:0009881,9.88e-10,18;UBERON:0004141,9.88e-10,18;UBERON:0003084,9.88e-10,18;UBERON:0007005,9.88e-10,18;UBERON:0004139,9.88e-10,18;UBERON:0004291,9.88e-10,18;UBERON:0004535,2.80e-08,23;UBERON:0001009,2.80e-08,23;UBERON:0003103,8.05e-08,43 | |||
|phase1_expression=8.80818659076367,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89562681343828,3.85232338634155,2.20256102594018,3.12956537739216,0.436050312760893,0,0,0.55994568650145,0,0,0,0,10.5476368774738,6.30373567865265,9.7977697532714,0.606949382578793,0.528990979272033,0.633831403506179,2.37191172448392,0,0.449949858640699,0,0,0.898800331555214,0.768436610643109,0.933206510776299,0.945041568321835,1.05162480675691,2.28520787523043,1.98781686856452,0.489963196859816,0.575072826109418,0.919218786610021,0,0,0,0.659431438650969,0.640413505216868,0.52091337055676,0,0,0,2.06240009831567,2.27794689278565,1.4911955666024,2.57469057332826,2.41828992341714,0,0,0,0,0,0,0.280888840263504,0,0.519572009205738,0.35333957451034,10.4224130634744,0,0,0,1.5154372870785,1.26679932737549,0,0.68510327831436,1.29468941823586,0.148442139064825,4.51061849591953,3.34912026143355,8.99400439298628,3.61734337326294,5.29149182110672,1.0053327306374,0.741584903203122,1.44599356919912,0,5.01477234836968,2.20841518460394,0.484875253135222,0,0,1.04723353406728,1.27728527604296,0,0,0,0,0,0.376963056338593,0,0.511430914660661,0,0,5.09196819251581,1.61729061793121,0,0.210441855886474,2.47228841629137,2.06911893990126,3.24111833649629,1.9591626318643,2.38127747029647,1.7935920839879,2.06143794031403,1.81092359517311,3.01795190105979,2.45837904218165,4.57472922826267,6.57587197282724,5.83899223373756,5.92028683087683,4.52720700097476,10.9468846750171,0,0,0,5.17814431338755,5.15957331958412,6.84235833551856,8.75955521665278,8.46086196513836,6.01641740260775,6.51095045301142,6.17028823219124,6.53885917256149,4.93679549740441,7.05920095540109,6.16122952548504,3.50879969820798,5.92785311285837,3.62357330653004,0.210289948564127,1.3377599609307,0,0.264450566663544,7.03851226766272,6.27039014023184,6.05677068213839,3.42861991859682,6.22658522765637,2.66315876557583,1.42358718463353,2.9645811850322,4.02136334080431,3.78017296878187,3.31438948102504,2.69645822596266,2.59365659849633,2.19055400579804,10.2420666514664,10.2823661348756,7.88954149711563,9.16430975303914,7.75809948670503,9.11765658574141,5.6280518040589,1.18088118383682,2.66897837330337,1.23397163921801,0.296452627087149,1.16791574001266,0.982794975566015,0.899448449539415,0.608580364165509,0.482354319504834,0.50925170356284,0.863088412352432,0.486405680325106,0.549122826376163,1.43768206527355,1.48856379067401,0.624075346229121,0.252578877947112,0.179397413521912,0.482443521363367,1.29327233116623,4.54779388249163,4.88894929326078,5.43184274480602,6.33663670378956,5.86271901046355,4.04674189506223,5.65887578787617,3.78324345854858,5.09368786192182,3.82691444777969,1.3109065177259,0.863424909329478,1.15719246865209,0,0,0.983528546038072,2.75936746304733,0.160550589987792,0,0.983609672260053,4.29200576247434,3.47059041357882,3.51394869866975,3.44677436372478,3.82350076724083,4.01037613348309,2.83076530788832,4.04810701674894,3.21481443702443,3.16230222357219,0,2.12910127812403,7.83488656135923,9.93610452056814,2.47455184458803,0,4.61283208694465,4.53485335447127,3.39489143560617,4.13422650033082,4.30409207121498,3.87642439752332,1.81766864738753,2.13898427030833,0.632073515871632,3.16255825724996,0,0.340439605753788,3.42116078659489,5.82114077022395,5.78709994585299,6.38424841112185,3.74574516964348,3.78462747384878,2.74018454203139,5.63212099352905,4.44847348814022,0,0.98931751764888,5.9741837877485,3.25689794612042,3.22305328808468,2.1338316966858,2.62332752966866,0,0,4.95328483111734,2.77791791054568,0,0,0,0,0,0,0,4.74503990371703,5.28630614529807,2.91614420218863,1.88179466413022,4.36725127492355,2.69728692769641,4.05001933054146,2.35580347785627,1.42576470620972,1.24267862617385,0.56369293868419,11.3632574993424,6.9492565991981,8.36140109879405,5.42471258606471,8.44780627453891,10.2100797621806,4.55715346953825,4.08951443260272,0.241584120826006,0.864090018773596,0,4.86540516696394,3.80030541509861,1.68897069871134,0.537080087002444,1.58945083825012,0.721172697119813,0.295379054349154,0.201932899896295,0.228620419965,0.302478555410522,0.292373642219257,0.384847366561318,0,0.906921534460845,1.10992976687032,0.717710852875806,0.671538465456314,0.386379188064381,4.69206188627955,3.6630324853453,0.214368379079066,0.501572104035363,0.564751842617067,0,1.71868654031819,0.515559547031063,0,0,0,0,0,0,1.14166082342594,3.19219898720825,4.60980735536162,6.32077464377565,1.67690530102386,2.38996560985018,6.44515510624684,4.94484137373346,3.20919209591815,5.05394423527595,6.08350319736575,6.22466926574051,5.24392441831341,5.76226371643823,5.68611142660571,8.57328644309533,6.02598494913249,5.59436739344745,6.59337441285291,5.7407578852415,4.80016953339582,6.21165321557681,5.7224685587357,5.66851024866081,4.04670335785922,5.58456412085065,4.93905526756486,5.78753365163254,4.6173398707593,2.80571135828869,5.69448086996036,5.61475549540712,5.72923460437565,5.88759996506671,5.98010494041538,4.99621155875892,5.84829021113521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| |||
|short_description=p3@Lamb1 | |||
}} |
Revision as of 22:42, 12 September 2013
Short description: | p3@Lamb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Lamb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2779 |
Association with transcript: | 161bp_to_ENSMUST00000164228_5end |
EntrezGene: | Lamb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 9.88e-10 | 18 |
heart | 9.88e-10 | 18 |
primitive heart tube | 9.88e-10 | 18 |
primary heart field | 9.88e-10 | 18 |
anterior lateral plate mesoderm | 9.88e-10 | 18 |
heart tube | 9.88e-10 | 18 |
heart primordium | 9.88e-10 | 18 |
cardiac mesoderm | 9.88e-10 | 18 |
cardiogenic plate | 9.88e-10 | 18 |
heart rudiment | 9.88e-10 | 18 |
cardiovascular system | 2.80e-08 | 23 |
circulatory system | 2.80e-08 | 23 |
compound organ | 8.05e-08 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.