FFCP PHASE1:Hg19::chr3:25671835..25671846,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7155|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11990|TSSclassifier=N|UniProt=|association_with_transcript=-189bp_to_ENST00000491510_5end|description=CAGE_peak_4_at_TOP2B_5end|id=chr3:25671835..25671846,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!3.87e-10!239;DOID:162!5.45e-10!235;DOID:2531!2.63e-08!51;DOID:0060083!2.63e-08!51;DOID:1240!3.10e-07!39|ontology_enrichment_disease_v019=DOID:1240;1.60e-08;39|ontology_enrichment_disease_v019_2=DOID:1240,9.45e-10,39;DOID:2531,1.12e-09,51;DOID:0060083,1.12e-09,51|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.181678379270557,0.428201047781966,0.563817616383885,2.00146596706261,0.446961094427288,1.74467704820074,0,0,0.522371256399677,0,0,0,0,0.123766352960047,0,0,1.20538905604795,0,1.95173119516203,0,0,0,0.286235987131057,0.821246550437305,0.627713197974014,0.305653622991805,0.410502947249729,0.629686250509434,0,0,0,0,0,0,0.309868802321207,0.426507697462265,0.293600439334847,0,0.601633342410425,0.217010870715852,0.223915474239924,0,0,0.436194716338694,0,0,0,0.411167888021826,0,0.28769239232215,0.256160706529101,0.236482229888585,0,0,0,0.564727018627814,0.272906150057846,0.224723484445085,0.306083892370903,0,0,0,0.199463657621632,0,1.16083695451434,0,0,0.251248665256743,2.60741459210101,0.217188844705117,0,0,0,0.211255286311942,0.212604299965044,0,0.336985893439485,0.150176892841506,0.32145117339416,0,0.39783335439818,0,0,0,0,0.426730222566507,0,0.574752439954483,0,0.954053754535364,0,0,0,0,0,1.58030450865046,0,1.57204305099666,0,0,0.32592226663359,0,0,0,0,1.10766947291811,0,0,0.130059347559878,0.493313713811028,0,0.289803085735052,0,0,0,0.226618685395132,0.766440987203842,0.34362744548263,0.506039384039006,0,0,0.950452044448374,0,0,0,0,0,0.201606743224732,0.267440195783507,0.579297615531196,0,0,0.12786256184353,0,0,0.434539556882471,0,0,0.378139268656271,0.443458794925128,0.87834785693126,0.0654895377488563,0,0.370784442784429,0,0.174129737299267,0.398873881556595,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0.825354125820202,0.626984899610432,0.258416759169329,0,0,0,0,0.24406205754817,0,0.81014194788176,0.17859945656816,0.22452937262617,0.112611480483322,0,0,0,1.31780417436063,0,0,0,0.506522046658319,0.132409180813219,0.286836620748814,1.06400514659507,0,0,0.49333509683432,0,0.404132016209064,0.163461903113459,0,0.576175924479999,0,0,0,0.747243402759005,0,0,0,0,0.491337269247072,0.103325781175765,0,0.741800787835671,0,0,0.505008341862199,0.500474079487857,0,0,0.30648779579902,0,0.340296549480063,0.179389635688862,0,0.423863802319124,0.300091096084402,0,0,0.558350568994769,0.337552664482532,0,0,0.184099797284599,0.323292113637624,0.355009592516614,0,0.339121184620975,0.386521706326594,0,0,0.853815942907168,0.397589304964456,0.348581828608555,0.725627385107593,0.504641701751257,1.45990943630332,0,1.28648187638577,0,0.928735856063958,0,0.118306800039844,0.674338760312407,0.241011029883482,0.220587945464788,0,0.71181185733329,0.674156540800822,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,1.7658523976586,0.491953754172454,0.686271241194102,0.109750285408626,0,1.20634766893957,0.370353780634118,0,0,2.88662684050547,0.34779121492523,0.352226082707465,0,0,1.14152491340759,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0,0.16798212819886,0.283550194484773,0.358234090811393,0.290633938513962,0,0,0.088048434013226,0,0.144119953416961,0.12624243342638,0.190493682876507,0,0,0,0.308482478109971,0.600686115687835,0,0,0,0.66004457238855,0,0,0.845302752556,0.531876233169741,0,0,0,0.266422179016099,0.142977993658148,0,0,0,0,0.791951872933429,0.301439377059586,0,0.399891964728228,0,0,4.21667878966063,0.239624855491583,0,0,0.144781306667579,0.821905290201534,0.716243852959582,0.448340575974109,0,0.215627574859517,0.385029108839245,0,0,0,0.670065061337395,1.91381625495949,0.749007023947182,2.99161459204025,0,0.613457458595699,0,0,1.45579603071565,1.60586089917446,0.315404830067869,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,0.620304078368662,0,0.320182673410333,0,0,0,0,0,0.561320188866147,0,0,0.321707842287215,0,0.154209693802656,0,0,0,0.232420756919918,0.120859449591622,0.200506470303285,0.736647911487171,0.229628896329213,0.546273504020151,0.524497659837696,0,0.308061348417659,0,0,0.211103257785751,0,0,0.647747748306418,0,0,0,0,0,0.447749509444357,0,0.261435451024901,0,0,0,0.206082023295445,0.366277859273374,0.330037999682352,0,0,0,0.193341436584244,0.308097234229289,0.460511024178389,0.137836572484531,0.429680979473094,0.290033387828457,0.596586391912706,0.356128142586949,0.165284915360978,0.192190067365106,0,0.6069466851333,0,0,0,0,0,0.869932992075073,0,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0.539617372749944,0.274537029736055,0.706874414074119,0,0,0,0,0.243713489631284,0,0,0.14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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=7155 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11990 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-189bp_to_ENST00000491510_5end | |||
|description=CAGE_peak_4_at_TOP2B_5end | |||
|id=chr3:25671835..25671846,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.87e-10!239;DOID:162!5.45e-10!235;DOID:2531!2.63e-08!51;DOID:0060083!2.63e-08!51;DOID:1240!3.10e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.60e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,9.45e-10,39;DOID:2531,1.12e-09,51;DOID:0060083,1.12e-09,51 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p4@TOP2B | |||
}} |
Revision as of 23:44, 12 September 2013
Short description: | p4@TOP2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_TOP2B_5end |
Coexpression cluster: | NA |
Association with transcript: | -189bp_to_ENST00000491510_5end |
EntrezGene: | TOP2B |
HGNC: | 11990 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukemia | 9.45e-10 | 39 |
hematologic cancer | 1.12e-09 | 51 |
immune system cancer | 1.12e-09 | 51 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.