FFCP PHASE1:Hg19::chr3:35683711..35683722,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10777|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16968|TSSclassifier=S|UniProt=Q9UBL0|association_with_transcript=54bp_to_ENST00000187397_5end|coexpression_cluster_id=C1604|description=CAGE_peak_48_at_ARPP21_5end|id=chr3:35683711..35683722,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000817;6.62e-41;1!CL:0000047;5.69e-21;2|ontology_enrichment_celltype_v019_2=CL:0000817,1.22e-14,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001893!1.08e-41!34;UBERON:0001869!2.59e-39!32;UBERON:0002791!4.80e-38!33;UBERON:0002020!5.57e-37!34;UBERON:0003528!5.57e-37!34;UBERON:0002780!3.86e-34!41;UBERON:0001890!3.86e-34!41;UBERON:0006240!3.86e-34!41;UBERON:0001049!9.36e-34!57;UBERON:0005068!9.36e-34!57;UBERON:0006241!9.36e-34!57;UBERON:0007135!9.36e-34!57;UBERON:0000956!2.11e-33!25;UBERON:0000203!2.11e-33!25;UBERON:0003080!2.91e-33!42;UBERON:0002619!2.10e-32!22;UBERON:0001950!6.12e-30!20;UBERON:0002616!5.15e-29!59;UBERON:0001017!2.65e-27!82;UBERON:0005743!7.57e-26!86;UBERON:0003056!8.56e-25!61;UBERON:0002346!1.31e-24!90;UBERON:0000955!6.94e-24!69;UBERON:0006238!6.94e-24!69;UBERON:0003075!1.94e-23!86;UBERON:0007284!1.94e-23!86;UBERON:0000200!3.29e-23!6;UBERON:0000073!5.20e-23!94;UBERON:0001016!5.20e-23!94;UBERON:0002771!2.02e-17!3;UBERON:0001871!3.44e-17!7;UBERON:0000153!9.13e-16!129;UBERON:0007811!9.13e-16!129;UBERON:0007023!6.39e-15!115;UBERON:0000033!2.68e-13!123;UBERON:0000924!4.40e-13!173;UBERON:0006601!4.40e-13!173;UBERON:0004121!3.53e-12!169;UBERON:0001872!7.01e-11!5;UBERON:0000349!1.96e-10!5;UBERON:0000025!5.02e-08!194;UBERON:0002702!2.82e-07!1;UBERON:0001874!5.69e-07!1;UBERON:0002370!6.39e-07!4;UBERON:0005058!6.39e-07!4;UBERON:0009113!6.39e-07!4;UBERON:0003295!6.39e-07!4;UBERON:0005562!6.39e-07!4|ontology_enrichment_uberon_v019=UBERON:0002370;3.49e-79;2!UBERON:0005058;3.49e-79;2!UBERON:0009113;3.49e-79;2!UBERON:0004177;1.70e-32;5!UBERON:0005057;1.70e-32;5!UBERON:0001872;3.22e-09;5!UBERON:0000077;7.03e-07;27!UBERON:0002405;7.03e-07;27|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.71e-40,4;UBERON:0005058,2.71e-40,4;UBERON:0009113,2.71e-40,4;UBERON:0003295,2.71e-40,4;UBERON:0005562,2.71e-40,4;UBERON:0003351,2.72e-27,6;UBERON:0004177,1.44e-23,7;UBERON:0005057,1.44e-23,7;UBERON:0000974,7.51e-17,10;UBERON:0003408,7.51e-17,10;UBERON:0001042,7.51e-17,10;UBERON:0009145,7.51e-17,10;UBERON:0006562,2.02e-15,11;UBERON:0009722,2.02e-15,11;UBERON:0007690,2.02e-15,11;UBERON:0008814,7.76e-10,18;UBERON:0001557,2.26e-09,19;UBERON:0001872,3.49e-09,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.882926198829301,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,3.17392268548179,0.213425530045242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0.250381861413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.126831620387814,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16260037704811,2.48298857183432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0|short_description=p48@ARPP21}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=10777 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16968 | |||
|TSSclassifier=S | |||
|UniProt=Q9UBL0 | |||
|association_with_transcript=54bp_to_ENST00000187397_5end | |||
|coexpression_cluster_id=C1604 | |||
|description=CAGE_peak_48_at_ARPP21_5end | |||
|id=chr3:35683711..35683722,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000817;6.62e-41;1!CL:0000047;5.69e-21;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,1.22e-14,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002370;3.49e-79;2!UBERON:0005058;3.49e-79;2!UBERON:0009113;3.49e-79;2!UBERON:0004177;1.70e-32;5!UBERON:0005057;1.70e-32;5!UBERON:0001872;3.22e-09;5!UBERON:0000077;7.03e-07;27!UBERON:0002405;7.03e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.71e-40,4;UBERON:0005058,2.71e-40,4;UBERON:0009113,2.71e-40,4;UBERON:0003295,2.71e-40,4;UBERON:0005562,2.71e-40,4;UBERON:0003351,2.72e-27,6;UBERON:0004177,1.44e-23,7;UBERON:0005057,1.44e-23,7;UBERON:0000974,7.51e-17,10;UBERON:0003408,7.51e-17,10;UBERON:0001042,7.51e-17,10;UBERON:0009145,7.51e-17,10;UBERON:0006562,2.02e-15,11;UBERON:0009722,2.02e-15,11;UBERON:0007690,2.02e-15,11;UBERON:0008814,7.76e-10,18;UBERON:0001557,2.26e-09,19;UBERON:0001872,3.49e-09,5 | |||
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|short_description=p48@ARPP21 | |||
}} |
Revision as of 23:56, 12 September 2013
Short description: | p48@ARPP21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_48_at_ARPP21_5end |
Coexpression cluster: | C1604_thymus_acute_CD34_CD133_Hodgkin_non_vein |
Association with transcript: | 54bp_to_ENST00000187397_5end |
EntrezGene: | ARPP21 |
HGNC: | 16968 |
UniProt: | Q9UBL0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 1.22e-14 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.71e-40 | 4 |
hemolymphoid system gland | 2.71e-40 | 4 |
thymic region | 2.71e-40 | 4 |
pharyngeal gland | 2.71e-40 | 4 |
thymus primordium | 2.71e-40 | 4 |
pharyngeal epithelium | 2.72e-27 | 6 |
hemopoietic organ | 1.44e-23 | 7 |
immune organ | 1.44e-23 | 7 |
neck | 7.51e-17 | 10 |
gland of gut | 7.51e-17 | 10 |
chordate pharynx | 7.51e-17 | 10 |
pharyngeal region of foregut | 7.51e-17 | 10 |
pharynx | 2.02e-15 | 11 |
entire pharyngeal arch endoderm | 2.02e-15 | 11 |
early pharyngeal endoderm | 2.02e-15 | 11 |
pharyngeal arch system | 7.76e-10 | 18 |
upper respiratory tract | 2.26e-09 | 19 |
parietal lobe | 3.49e-09 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.