FFCP PHASE1:Mm9::chr13:54011109..54011118,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=57|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:54011109..54011118,-|id=chr13:54011109..54011118,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!5.67e-13!9;UBERON:0000019!5.67e-13!9;UBERON:0000047!5.67e-13!9;UBERON:0004088!5.67e-13!9;UBERON:0002104!5.67e-13!9;UBERON:0001456!5.67e-13!9;UBERON:0003072!5.67e-13!9;UBERON:0003071!5.67e-13!9;UBERON:0004128!5.67e-13!9;UBERON:0007100!5.69e-13!18;UBERON:0000948!5.69e-13!18;UBERON:0005498!5.69e-13!18;UBERON:0004140!5.69e-13!18;UBERON:0009881!5.69e-13!18;UBERON:0004141!5.69e-13!18;UBERON:0003084!5.69e-13!18;UBERON:0007005!5.69e-13!18;UBERON:0004139!5.69e-13!18;UBERON:0004291!5.69e-13!18;UBERON:0001444!2.94e-10!11;UBERON:0004535!2.01e-09!23;UBERON:0001009!2.01e-09!23;UBERON:0000020!3.04e-09!12;UBERON:0001032!3.04e-09!12;UBERON:0004456!3.04e-09!12;UBERON:0005085!2.18e-08!13;UBERON:0004872!8.92e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.98e-48,9;UBERON:0000019,4.98e-48,9;UBERON:0000047,4.98e-48,9;UBERON:0010312,4.98e-48,9;UBERON:0004088,4.98e-48,9;UBERON:0002104,4.98e-48,9;UBERON:0001456,4.98e-48,9;UBERON:0003072,4.98e-48,9;UBERON:0004128,4.98e-48,9;UBERON:0003071,4.98e-48,9;UBERON:0001444,2.66e-39,11;UBERON:0000020,5.03e-36,12;UBERON:0001032,5.03e-36,12;UBERON:0004456,5.03e-36,12;UBERON:0000033,2.98e-33,13;UBERON:0005085,2.98e-33,13;UBERON:0007811,6.76e-12,36;UBERON:0000153,6.53e-10,43;UBERON:0003056,1.17e-08,49;UBERON:0010314,2.82e-07,92|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0,0.420883711772948,0,5.28774840196988,36.3725502206805,31.6480117455002,25.5817236808993,19.0889443224426,18.7403449119458,42.6860561719376,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,2.80236821681207,0.493679549740441,0.492502392237286,0.648550476366846,0.584799949701329,0.658650345873152,1.34206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75474732901937,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0,0.412070114477788,0,0.505394423527595,0,0.377252682772152,0.280924522409647,0.384150914429216,0.287177344778066,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0,0.145346416632329,0.188218760830661,0,0.365855945745545,0,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0,0.385813221962283,0.749431733813838,0.701794825336225,0.214871054048298,0.191288332068843,0,0|short_description=p@chr13:54011109..54011118,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=57 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:54011109..54011118,- | |||
|id=chr13:54011109..54011118,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!5.67e-13!9;UBERON:0000019!5.67e-13!9;UBERON:0000047!5.67e-13!9;UBERON:0004088!5.67e-13!9;UBERON:0002104!5.67e-13!9;UBERON:0001456!5.67e-13!9;UBERON:0003072!5.67e-13!9;UBERON:0003071!5.67e-13!9;UBERON:0004128!5.67e-13!9;UBERON:0007100!5.69e-13!18;UBERON:0000948!5.69e-13!18;UBERON:0005498!5.69e-13!18;UBERON:0004140!5.69e-13!18;UBERON:0009881!5.69e-13!18;UBERON:0004141!5.69e-13!18;UBERON:0003084!5.69e-13!18;UBERON:0007005!5.69e-13!18;UBERON:0004139!5.69e-13!18;UBERON:0004291!5.69e-13!18;UBERON:0001444!2.94e-10!11;UBERON:0004535!2.01e-09!23;UBERON:0001009!2.01e-09!23;UBERON:0000020!3.04e-09!12;UBERON:0001032!3.04e-09!12;UBERON:0004456!3.04e-09!12;UBERON:0005085!2.18e-08!13;UBERON:0004872!8.92e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.98e-48,9;UBERON:0000019,4.98e-48,9;UBERON:0000047,4.98e-48,9;UBERON:0010312,4.98e-48,9;UBERON:0004088,4.98e-48,9;UBERON:0002104,4.98e-48,9;UBERON:0001456,4.98e-48,9;UBERON:0003072,4.98e-48,9;UBERON:0004128,4.98e-48,9;UBERON:0003071,4.98e-48,9;UBERON:0001444,2.66e-39,11;UBERON:0000020,5.03e-36,12;UBERON:0001032,5.03e-36,12;UBERON:0004456,5.03e-36,12;UBERON:0000033,2.98e-33,13;UBERON:0005085,2.98e-33,13;UBERON:0007811,6.76e-12,36;UBERON:0000153,6.53e-10,43;UBERON:0003056,1.17e-08,49;UBERON:0010314,2.82e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0.162241263067758,0,0,0,0.420883711772948,0,5.28774840196988,36.3725502206805,31.6480117455002,25.5817236808993,19.0889443224426,18.7403449119458,42.6860561719376,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0,0.473489471170421,0.196764231747404,0.154267112887378,0.232533944750408,0.268273401399619,2.80236821681207,0.493679549740441,0.492502392237286,0.648550476366846,0.584799949701329,0.658650345873152,1.34206418760372,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.75474732901937,0,0,0,0,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,0,0.412070114477788,0,0.505394423527595,0,0.377252682772152,0.280924522409647,0.384150914429216,0.287177344778066,0.476293691283074,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0,0.145346416632329,0.188218760830661,0,0.365855945745545,0,0.135804113845862,0.561142271657738,0.237270036248348,0.197008964751127,0.409231043169689,0,0.385813221962283,0.749431733813838,0.701794825336225,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr13:54011109..54011118,- | |||
}} |
Revision as of 00:46, 13 September 2013
Short description: | p@chr13:54011109..54011118, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:54011109..54011118, - |
Coexpression cluster: | MCL_coexpression_mm9:57 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 4.98e-48 | 9 |
camera-type eye | 4.98e-48 | 9 |
simple eye | 4.98e-48 | 9 |
immature eye | 4.98e-48 | 9 |
ocular region | 4.98e-48 | 9 |
visual system | 4.98e-48 | 9 |
face | 4.98e-48 | 9 |
optic cup | 4.98e-48 | 9 |
optic vesicle | 4.98e-48 | 9 |
eye primordium | 4.98e-48 | 9 |
subdivision of head | 2.66e-39 | 11 |
sense organ | 5.03e-36 | 12 |
sensory system | 5.03e-36 | 12 |
entire sense organ system | 5.03e-36 | 12 |
head | 2.98e-33 | 13 |
ectodermal placode | 2.98e-33 | 13 |
craniocervical region | 6.76e-12 | 36 |
anterior region of body | 6.53e-10 | 43 |
pre-chordal neural plate | 1.17e-08 | 49 |
structure with developmental contribution from neural crest | 2.82e-07 | 92 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.