FFCP PHASE1:Mm9::chr13:54819921..54819933,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=140|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:54819921..54819933,+|id=chr13:54819921..54819933,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.12e-29!43;UBERON:0005409!9.25e-23!59;UBERON:0004921!1.41e-09!126;UBERON:0004185!1.41e-09!126;UBERON:0001007!2.31e-09!128;UBERON:0001555!2.31e-09!128;UBERON:0007026!2.31e-09!128;UBERON:0001242!3.71e-09!13;UBERON:0000060!3.71e-09!13;UBERON:0001262!3.71e-09!13;UBERON:0004786!3.71e-09!13;UBERON:0004119!3.74e-09!130;UBERON:0000925!3.74e-09!130;UBERON:0006595!3.74e-09!130;UBERON:0001155!1.63e-08!2;UBERON:0000059!1.63e-08!2;UBERON:0000344!7.38e-08!15|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.62e-25,31;UBERON:0001155,2.00e-20,2;UBERON:0000059,2.00e-20,2;UBERON:0005409,1.49e-16,47;UBERON:0001153,8.99e-11,1;UBERON:0001045,8.99e-11,1|phase1_expression=0,0.348975407639361,0,0.60492842261366,1.00179145989269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57423196411502,0,0,0.950117097281869,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,0.793351699990633,0,0,0,0,0.22237804384487,0.190225626112559,4.2707615539006,0.494096864172033,0,0.795825888164603,0.58489226135736,4.49409704327111,2.80979464837102,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr13:54819921..54819933,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=140 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:54819921..54819933,+ | |||
|id=chr13:54819921..54819933,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.12e-29!43;UBERON:0005409!9.25e-23!59;UBERON:0004921!1.41e-09!126;UBERON:0004185!1.41e-09!126;UBERON:0001007!2.31e-09!128;UBERON:0001555!2.31e-09!128;UBERON:0007026!2.31e-09!128;UBERON:0001242!3.71e-09!13;UBERON:0000060!3.71e-09!13;UBERON:0001262!3.71e-09!13;UBERON:0004786!3.71e-09!13;UBERON:0004119!3.74e-09!130;UBERON:0000925!3.74e-09!130;UBERON:0006595!3.74e-09!130;UBERON:0001155!1.63e-08!2;UBERON:0000059!1.63e-08!2;UBERON:0000344!7.38e-08!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.62e-25,31;UBERON:0001155,2.00e-20,2;UBERON:0000059,2.00e-20,2;UBERON:0005409,1.49e-16,47;UBERON:0001153,8.99e-11,1;UBERON:0001045,8.99e-11,1 | |||
|phase1_expression=0,0.348975407639361,0,0.60492842261366,1.00179145989269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57423196411502,0,0,0.950117097281869,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,4.85368404896324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,0.793351699990633,0,0,0,0,0.22237804384487,0.190225626112559,4.2707615539006,0.494096864172033,0,0.795825888164603,0.58489226135736,4.49409704327111,2.80979464837102,2.38969527905241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.12109756922687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.777689839750757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:54819921..54819933,+ | |||
}} |
Revision as of 00:48, 13 September 2013
Short description: | p@chr13:54819921..54819933, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:54819921..54819933, + |
Coexpression cluster: | MCL_coexpression_mm9:140 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 3.62e-25 | 31 |
colon | 2.00e-20 | 2 |
large intestine | 2.00e-20 | 2 |
gastrointestinal system | 1.49e-16 | 47 |
caecum | 8.99e-11 | 1 |
midgut | 8.99e-11 | 1 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.