FFCP PHASE1:Mm9::chr13:61304767..61304779,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=58518|HGNC=|MCL_coexpression_id=31|UniProt=Q9ET52|association_with_transcript=0bp_to_ENSMUST00000021890_5end|description=CAGE_peak_1_at_Cts6_5end|id=chr13:61304767..61304779,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005631!2.91e-11!3;UBERON:0000478!2.91e-11!3;UBERON:0000158!2.91e-11!3;UBERON:0000305!5.23e-09!1|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.70e-39,3;UBERON:0000478,1.70e-39,3;UBERON:0000158,1.70e-39,3;UBERON:0000305,5.62e-30,1;UBERON:0001987,6.78e-16,2;UBERON:0003124,6.78e-16,2;UBERON:0004340,6.78e-16,2;UBERON:0004923,6.63e-12,24;UBERON:0004871,5.71e-11,3;UBERON:0005795,1.23e-08,4;UBERON:0000995,1.23e-08,4;UBERON:0003975,3.64e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,549.514413273513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3691.80933101466,0,0,0,0,0,0,0,0,0,0,3.1483069652851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.280924522409647,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0|short_description=p1@Cts6}} | ||
|EntrezGene=58518 | |||
|HGNC= | |||
|MCL_coexpression_id=31 | |||
|UniProt=Q9ET52 | |||
|association_with_transcript=0bp_to_ENSMUST00000021890_5end | |||
|description=CAGE_peak_1_at_Cts6_5end | |||
|id=chr13:61304767..61304779,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.91e-11!3;UBERON:0000478!2.91e-11!3;UBERON:0000158!2.91e-11!3;UBERON:0000305!5.23e-09!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.70e-39,3;UBERON:0000478,1.70e-39,3;UBERON:0000158,1.70e-39,3;UBERON:0000305,5.62e-30,1;UBERON:0001987,6.78e-16,2;UBERON:0003124,6.78e-16,2;UBERON:0004340,6.78e-16,2;UBERON:0004923,6.63e-12,24;UBERON:0004871,5.71e-11,3;UBERON:0005795,1.23e-08,4;UBERON:0000995,1.23e-08,4;UBERON:0003975,3.64e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,549.514413273513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3691.80933101466,0,0,0,0,0,0,0,0,0,0,3.1483069652851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.280924522409647,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0.118635018124174,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@Cts6 | |||
}} | |||
Revision as of 00:58, 13 September 2013
| Short description: | p1@Cts6 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Cts6_5end |
| Coexpression cluster: | MCL_coexpression_mm9:31 |
| Association with transcript: | 0bp_to_ENSMUST00000021890_5end |
| EntrezGene: | Cts6 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| extraembryonic membrane | 1.70e-39 | 3 |
| extraembryonic structure | 1.70e-39 | 3 |
| membranous layer | 1.70e-39 | 3 |
| amnion | 5.62e-30 | 1 |
| placenta | 6.78e-16 | 2 |
| chorion | 6.78e-16 | 2 |
| allantois | 6.78e-16 | 2 |
| organ component layer | 6.63e-12 | 24 |
| somatic layer of lateral plate mesoderm | 5.71e-11 | 3 |
| embryonic uterus | 1.23e-08 | 4 |
| uterus | 1.23e-08 | 4 |
| internal female genitalia | 3.64e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
