FFCP PHASE1:Mm9::chr13:78339241..78339273,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=13865|HGNC=|MCL_coexpression_id=22|UniProt=Q32NY6|association_with_transcript=-223bp_to_ENSMUST00000091458_5end|description=CAGE_peak_9_at_Nr2f1_5end|id=chr13:78339241..78339273,-|ontology_enrichment_celltype=CL:0000221!1.31e-18!44;CL:0000133!1.31e-18!44;CL:0002319!9.31e-18!43;CL:0000540!5.26e-15!33;CL:0000047!5.26e-15!33;CL:0000031!5.26e-15!33;CL:0000404!5.26e-15!33;CL:0000117!1.02e-13!23;CL:0000337!1.02e-13!23;CL:0000055!3.86e-13!50;CL:0000393!7.27e-11!39;CL:0000211!7.27e-11!39|ontology_enrichment_celltype_v019_2=CL:0000117,3.26e-26,23;CL:0000337,3.26e-26,23;CL:0000221,7.65e-23,44;CL:0000133,7.65e-23,44;CL:0002319,7.42e-21,43;CL:0000540,6.73e-20,33;CL:0000047,6.73e-20,33;CL:0000031,6.73e-20,33;CL:0000404,6.73e-20,33;CL:0002609,7.44e-18,6;CL:0000393,2.76e-16,39;CL:0000211,2.76e-16,39;CL:0002321,1.03e-12,70;CL:0002613,1.95e-10,3;CL:0002608,7.62e-10,3;CL:0000120,1.48e-09,3;CL:0000197,3.15e-07,2;CL:0002491,3.15e-07,2;CL:0000098,3.15e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.32e-20!75;UBERON:0001016!1.32e-20!75;UBERON:0001017!9.64e-20!73;UBERON:0005743!9.64e-20!73;UBERON:0004121!7.76e-17!102;UBERON:0000924!7.76e-17!102;UBERON:0006601!7.76e-17!102;UBERON:0002346!5.70e-15!71;UBERON:0003075!5.70e-15!71;UBERON:0007284!5.70e-15!71;UBERON:0001049!2.98e-14!52;UBERON:0005068!2.98e-14!52;UBERON:0006241!2.98e-14!52;UBERON:0007135!2.98e-14!52;UBERON:0000033!1.17e-13!63;UBERON:0002020!1.70e-13!34;UBERON:0003056!1.83e-12!49;UBERON:0002616!2.39e-12!49;UBERON:0000955!8.00e-12!50;UBERON:0006238!8.00e-12!50;UBERON:0002780!9.10e-12!39;UBERON:0001890!9.10e-12!39;UBERON:0006240!9.10e-12!39;UBERON:0003080!3.54e-11!40;UBERON:0002791!1.72e-10!29;UBERON:0003528!1.72e-10!29;UBERON:0001893!1.72e-10!29;UBERON:0000956!2.27e-08!21;UBERON:0001869!2.27e-08!21;UBERON:0000203!2.27e-08!21;UBERON:0007811!5.05e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.38e-16,34;UBERON:0001017,8.43e-15,73;UBERON:0003528,9.71e-15,29;UBERON:0002791,9.71e-15,29;UBERON:0001893,9.71e-15,29;UBERON:0001016,2.80e-14,75;UBERON:0004121,7.76e-13,95;UBERON:0000924,7.76e-13,95;UBERON:0006601,7.76e-13,95;UBERON:0000073,1.98e-10,54;UBERON:0002780,3.01e-10,39;UBERON:0001890,3.01e-10,39;UBERON:0006240,3.01e-10,39;UBERON:0000369,3.40e-10,5;UBERON:0002435,3.40e-10,5;UBERON:0000204,3.40e-10,5;UBERON:0010082,3.40e-10,5;UBERON:0003080,6.35e-10,40;UBERON:0000956,8.73e-10,21;UBERON:0001869,8.73e-10,21;UBERON:0000203,8.73e-10,21;UBERON:0001049,1.46e-09,52;UBERON:0005068,1.46e-09,52;UBERON:0006241,1.46e-09,52;UBERON:0007135,1.46e-09,52;UBERON:0010371,3.10e-09,73;UBERON:0003056,6.41e-09,49;UBERON:0002346,2.62e-08,64;UBERON:0003075,2.62e-08,64;UBERON:0007284,2.62e-08,64;UBERON:0002616,2.83e-08,46;UBERON:0000955,4.84e-08,47;UBERON:0006238,4.84e-08,47;UBERON:0010314,2.06e-07,92;UBERON:0004766,3.15e-07,2;UBERON:0008193,3.15e-07,2;UBERON:0005913,3.15e-07,2;UBERON:0011158,3.15e-07,2;UBERON:0005744,3.15e-07,2;UBERON:0003457,3.15e-07,2;UBERON:0008001,3.15e-07,2;UBERON:0007497,3.15e-07,2;UBERON:0009955,3.15e-07,2;UBERON:0003067,3.15e-07,2;UBERON:0002546,3.15e-07,2;UBERON:0007914,3.15e-07,2;UBERON:0005253,3.15e-07,2;UBERON:0002227,3.15e-07,2;UBERON:0001846,3.15e-07,2;UBERON:0004339,3.15e-07,2;UBERON:0002105,3.15e-07,2;UBERON:0001678,3.15e-07,2;UBERON:0003128,3.15e-07,2;UBERON:0001694,3.15e-07,2;UBERON:0004681,3.15e-07,2;UBERON:0001839,3.15e-07,2;UBERON:0001690,3.15e-07,2;UBERON:0001844,3.15e-07,2;UBERON:0001849,3.15e-07,2;UBERON:0002499,3.15e-07,2;UBERON:0001855,3.15e-07,2;UBERON:0011137,3.15e-07,2;UBERON:0001703,3.15e-07,2;UBERON:0010323,3.15e-07,2;UBERON:0003129,3.15e-07,2;UBERON:0003069,3.15e-07,2;UBERON:0003051,3.15e-07,2;UBERON:0004637,3.15e-07,2;UBERON:0004761,3.15e-07,2;UBERON:0010113,3.15e-07,2;UBERON:0009123,3.15e-07,2;UBERON:0010351,3.15e-07,2;UBERON:0009617,3.15e-07,2;UBERON:0005641,3.15e-07,2;UBERON:0010349,3.15e-07,2;UBERON:0001954,5.70e-07,7;UBERON:0003022,5.70e-07,7;UBERON:0002421,5.70e-07,7;UBERON:0000349,5.70e-07,7;UBERON:0002600,5.70e-07,7|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.659058548203415,1.36100929351998,0.279972843250725,1.43752564364972,0,0,0,0,0,0,2.42779753031517,2.64495489636016,2.53532561402472,0.677689064138264,0.889294796111139,0,0,0,0,1.53687322128622,2.59224030771194,2.70011876663381,2.52389953621658,0.856952953211411,0.441737081903227,2.32732518508413,2.97120960156533,4.5960939330501,1.10115880999389,0.383062014255563,0,7.25374582516066,6.22115976496386,8.85552729946492,0,0.56276261003168,0.15279824777681,1.17851434189467,1.56608848879013,0.931997229126503,0.757261933331841,0.226714680320357,0,0,0,0,0,0,0,0,0,0,4.3661460130771,0,0,0,0,0,0,0,0,0,1.04091196059682,0,0,0.301445281105245,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0,0,1.25654352112864,0.347648640384553,0.255715457330331,0.41557608911912,0.324482526135515,0.4073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| ||
|EntrezGene=13865 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt=Q32NY6 | |||
|association_with_transcript=-223bp_to_ENSMUST00000091458_5end | |||
|description=CAGE_peak_9_at_Nr2f1_5end | |||
|id=chr13:78339241..78339273,- | |||
|ontology_enrichment_celltype=CL:0000221!1.31e-18!44;CL:0000133!1.31e-18!44;CL:0002319!9.31e-18!43;CL:0000540!5.26e-15!33;CL:0000047!5.26e-15!33;CL:0000031!5.26e-15!33;CL:0000404!5.26e-15!33;CL:0000117!1.02e-13!23;CL:0000337!1.02e-13!23;CL:0000055!3.86e-13!50;CL:0000393!7.27e-11!39;CL:0000211!7.27e-11!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.26e-26,23;CL:0000337,3.26e-26,23;CL:0000221,7.65e-23,44;CL:0000133,7.65e-23,44;CL:0002319,7.42e-21,43;CL:0000540,6.73e-20,33;CL:0000047,6.73e-20,33;CL:0000031,6.73e-20,33;CL:0000404,6.73e-20,33;CL:0002609,7.44e-18,6;CL:0000393,2.76e-16,39;CL:0000211,2.76e-16,39;CL:0002321,1.03e-12,70;CL:0002613,1.95e-10,3;CL:0002608,7.62e-10,3;CL:0000120,1.48e-09,3;CL:0000197,3.15e-07,2;CL:0002491,3.15e-07,2;CL:0000098,3.15e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.32e-20!75;UBERON:0001016!1.32e-20!75;UBERON:0001017!9.64e-20!73;UBERON:0005743!9.64e-20!73;UBERON:0004121!7.76e-17!102;UBERON:0000924!7.76e-17!102;UBERON:0006601!7.76e-17!102;UBERON:0002346!5.70e-15!71;UBERON:0003075!5.70e-15!71;UBERON:0007284!5.70e-15!71;UBERON:0001049!2.98e-14!52;UBERON:0005068!2.98e-14!52;UBERON:0006241!2.98e-14!52;UBERON:0007135!2.98e-14!52;UBERON:0000033!1.17e-13!63;UBERON:0002020!1.70e-13!34;UBERON:0003056!1.83e-12!49;UBERON:0002616!2.39e-12!49;UBERON:0000955!8.00e-12!50;UBERON:0006238!8.00e-12!50;UBERON:0002780!9.10e-12!39;UBERON:0001890!9.10e-12!39;UBERON:0006240!9.10e-12!39;UBERON:0003080!3.54e-11!40;UBERON:0002791!1.72e-10!29;UBERON:0003528!1.72e-10!29;UBERON:0001893!1.72e-10!29;UBERON:0000956!2.27e-08!21;UBERON:0001869!2.27e-08!21;UBERON:0000203!2.27e-08!21;UBERON:0007811!5.05e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.38e-16,34;UBERON:0001017,8.43e-15,73;UBERON:0003528,9.71e-15,29;UBERON:0002791,9.71e-15,29;UBERON:0001893,9.71e-15,29;UBERON:0001016,2.80e-14,75;UBERON:0004121,7.76e-13,95;UBERON:0000924,7.76e-13,95;UBERON:0006601,7.76e-13,95;UBERON:0000073,1.98e-10,54;UBERON:0002780,3.01e-10,39;UBERON:0001890,3.01e-10,39;UBERON:0006240,3.01e-10,39;UBERON:0000369,3.40e-10,5;UBERON:0002435,3.40e-10,5;UBERON:0000204,3.40e-10,5;UBERON:0010082,3.40e-10,5;UBERON:0003080,6.35e-10,40;UBERON:0000956,8.73e-10,21;UBERON:0001869,8.73e-10,21;UBERON:0000203,8.73e-10,21;UBERON:0001049,1.46e-09,52;UBERON:0005068,1.46e-09,52;UBERON:0006241,1.46e-09,52;UBERON:0007135,1.46e-09,52;UBERON:0010371,3.10e-09,73;UBERON:0003056,6.41e-09,49;UBERON:0002346,2.62e-08,64;UBERON:0003075,2.62e-08,64;UBERON:0007284,2.62e-08,64;UBERON:0002616,2.83e-08,46;UBERON:0000955,4.84e-08,47;UBERON:0006238,4.84e-08,47;UBERON:0010314,2.06e-07,92;UBERON:0004766,3.15e-07,2;UBERON:0008193,3.15e-07,2;UBERON:0005913,3.15e-07,2;UBERON:0011158,3.15e-07,2;UBERON:0005744,3.15e-07,2;UBERON:0003457,3.15e-07,2;UBERON:0008001,3.15e-07,2;UBERON:0007497,3.15e-07,2;UBERON:0009955,3.15e-07,2;UBERON:0003067,3.15e-07,2;UBERON:0002546,3.15e-07,2;UBERON:0007914,3.15e-07,2;UBERON:0005253,3.15e-07,2;UBERON:0002227,3.15e-07,2;UBERON:0001846,3.15e-07,2;UBERON:0004339,3.15e-07,2;UBERON:0002105,3.15e-07,2;UBERON:0001678,3.15e-07,2;UBERON:0003128,3.15e-07,2;UBERON:0001694,3.15e-07,2;UBERON:0004681,3.15e-07,2;UBERON:0001839,3.15e-07,2;UBERON:0001690,3.15e-07,2;UBERON:0001844,3.15e-07,2;UBERON:0001849,3.15e-07,2;UBERON:0002499,3.15e-07,2;UBERON:0001855,3.15e-07,2;UBERON:0011137,3.15e-07,2;UBERON:0001703,3.15e-07,2;UBERON:0010323,3.15e-07,2;UBERON:0003129,3.15e-07,2;UBERON:0003069,3.15e-07,2;UBERON:0003051,3.15e-07,2;UBERON:0004637,3.15e-07,2;UBERON:0004761,3.15e-07,2;UBERON:0010113,3.15e-07,2;UBERON:0009123,3.15e-07,2;UBERON:0010351,3.15e-07,2;UBERON:0009617,3.15e-07,2;UBERON:0005641,3.15e-07,2;UBERON:0010349,3.15e-07,2;UBERON:0001954,5.70e-07,7;UBERON:0003022,5.70e-07,7;UBERON:0002421,5.70e-07,7;UBERON:0000349,5.70e-07,7;UBERON:0002600,5.70e-07,7 | |||
|phase1_expression=2.7225304007815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0.659058548203415,1.36100929351998,0.279972843250725,1.43752564364972,0,0,0,0,0,0,2.42779753031517,2.64495489636016,2.53532561402472,0.677689064138264,0.889294796111139,0,0,0,0,1.53687322128622,2.59224030771194,2.70011876663381,2.52389953621658,0.856952953211411,0.441737081903227,2.32732518508413,2.97120960156533,4.5960939330501,1.10115880999389,0.383062014255563,0,7.25374582516066,6.22115976496386,8.85552729946492,0,0.56276261003168,0.15279824777681,1.17851434189467,1.56608848879013,0.931997229126503,0.757261933331841,0.226714680320357,0,0,0,0,0,0,0,0,0,0,4.3661460130771,0,0,0,0,0,0,0,0,0,1.04091196059682,0,0,0.301445281105245,0,0,0,0,0,0,0,0,0,0.292780797011547,0.41889341362691,0,0,0,0,0,0,1.25654352112864,0.347648640384553,0.255715457330331,0.41557608911912,0.324482526135515,0.407357455401265,0,0,0,1.43132487258974,0.919608417733892,0.900310649026746,0.90422890701429,0.340182495756639,0,0.281105173679186,0,0,0.189106080167819,0.175951124163949,0.219195732427575,0,0,0,0.796137067273973,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.308534225774757,0.232533944750408,0,0,0,0,0,0,0,0,0.420579897128254,0.823236899034275,0,0,1.06644125267617,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0.758671603812327,0.571242563048644,0,0.610953983535943,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0.589676985339609,0,0.202860121388503,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0.947457058852424,0.162964976442026,0.169745085775188,0,0,0,0.195133647857799,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0.160550589987792,0.117211686592203,0.327869890753351,0,0.315508219416257,0.390438744296638,0.215423397732799,0.477937595905104,0,0.283076530788832,0.809621403349789,0.292255857911312,0,0,0,0.712262414669021,0.488660878060728,0,0,0.485561272309963,0,0,0,0.307435147943927,0,0,0,0,1.05418608574999,0,0,0.18006109403131,0.388076051348264,0.643011105094777,0.177340233642274,0.535106452806212,0.329098041204242,0,0,0,0.220528398054962,0,0,0,0,0,0.291480836629851,0,0.170870880797853,0.412773735926445,0,0,0,0,0,0,0,0,3.32152793260192,0.813277868507395,0.756037385752609,0.418176592028937,0,0.134864346384821,0.165306911450672,0,0,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,1.20297227640581,0,1.5107877947794,0.675022500231806,0,0.453142408984205,0.51776031175182,2.07574695168353,1.19707462020309,1.02440163452481,0.486213434136588,0.419226325255965,0.551530525350042,0,0.206035057238894,0,0,0,0.377252682772152,0.37456602987953,0.128050304809739,0.287177344778066,0.476293691283074,0.347652977834566,0,0,0.147198920134397,0.685738504770831,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.25384382367503,0.182927972872773,0.789209134313529,0,0,0.118635018124174,0.492522411877817,0.409231043169689,0.464810523557898,0,1.24905288968973,0,0,0,0,0 | |||
|short_description=p9@Nr2f1 | |||
}} |
Revision as of 01:09, 13 September 2013
Short description: | p9@Nr2f1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Nr2f1_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -223bp_to_ENSMUST00000091458_5end |
EntrezGene: | Nr2f1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.26e-26 | 23 |
neuroblast (sensu Vertebrata) | 3.26e-26 | 23 |
ectodermal cell | 7.65e-23 | 44 |
neurectodermal cell | 7.65e-23 | 44 |
neural cell | 7.42e-21 | 43 |
neuron | 6.73e-20 | 33 |
neuronal stem cell | 6.73e-20 | 33 |
neuroblast | 6.73e-20 | 33 |
electrically signaling cell | 6.73e-20 | 33 |
neuron of cerebral cortex | 7.44e-18 | 6 |
electrically responsive cell | 2.76e-16 | 39 |
electrically active cell | 2.76e-16 | 39 |
embryonic cell | 1.03e-12 | 70 |
striatum neuron | 1.95e-10 | 3 |
hippocampal neuron | 7.62e-10 | 3 |
granule cell | 1.48e-09 | 3 |
receptor cell | 3.15e-07 | 2 |
auditory epithelial cell | 3.15e-07 | 2 |
sensory epithelial cell | 3.15e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.