FFCP PHASE1:Hg19::chr4:180980059..180980067,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C132|description=CAGE_peak_at_chr4:180980059..180980067,+|id=chr4:180980059..180980067,+|ontology_enrichment_celltype=CL:0000047!3.10e-07!8|ontology_enrichment_celltype_v019=CL:0000946;1.15e-14;1!CL:0000786;1.15e-14;1!CL:0000047;7.78e-08;2|ontology_enrichment_celltype_v019_2=CL:0000946,1.23e-14,1;CL:0000786,1.23e-14,1;CL:0000980,1.23e-14,1;CL:0000785,5.74e-08,2;CL:0000955,5.74e-08,2;CL:0000818,5.74e-08,2;CL:0000954,5.74e-08,2;CL:0000816,5.74e-08,2|ontology_enrichment_development_v019=UBERON:0003099;2.25e-14;1!UBERON:0003852;2.25e-14;1!CL:0000954;5.55e-08;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:8692;8.58e-20;31!DOID:1240;2.86e-13;39!DOID:4231;7.78e-08;2!DOID:1907;7.78e-08;2|ontology_enrichment_disease_v019_2=DOID:8692,8.80e-21,31;DOID:1240,2.02e-16,39;DOID:2531,1.96e-12,51;DOID:0060083,1.96e-12,51;DOID:4231,8.60e-08,2;DOID:1907,8.60e-08,2|ontology_enrichment_uberon=UBERON:0002780!5.17e-34!41;UBERON:0001890!5.17e-34!41;UBERON:0006240!5.17e-34!41;UBERON:0003080!4.95e-33!42;UBERON:0001893!7.81e-33!34;UBERON:0001869!5.30e-32!32;UBERON:0002791!5.98e-31!33;UBERON:0001049!2.26e-30!57;UBERON:0005068!2.26e-30!57;UBERON:0006241!2.26e-30!57;UBERON:0007135!2.26e-30!57;UBERON:0001017!5.45e-28!82;UBERON:0005743!5.88e-28!86;UBERON:0000073!1.99e-27!94;UBERON:0001016!1.99e-27!94;UBERON:0002020!5.75e-27!34;UBERON:0003528!5.75e-27!34;UBERON:0003056!6.25e-26!61;UBERON:0002616!6.68e-25!59;UBERON:0002346!3.19e-23!90;UBERON:0002619!1.43e-22!22;UBERON:0000956!5.56e-22!25;UBERON:0000203!5.56e-22!25;UBERON:0003075!1.55e-21!86;UBERON:0007284!1.55e-21!86;UBERON:0000955!2.34e-21!69;UBERON:0006238!2.34e-21!69;UBERON:0001950!1.01e-18!20;UBERON:0000924!2.24e-18!173;UBERON:0006601!2.24e-18!173;UBERON:0004121!5.55e-17!169;UBERON:0000033!1.81e-16!123;UBERON:0000153!3.10e-16!129;UBERON:0007811!3.10e-16!129;UBERON:0007023!7.89e-15!115;UBERON:0001871!7.38e-10!7;UBERON:0002420!3.54e-09!9;UBERON:0007245!3.54e-09!9;UBERON:0010009!3.54e-09!9;UBERON:0010011!3.54e-09!9;UBERON:0000454!3.54e-09!9;UBERON:0000200!4.24e-09!6;UBERON:0009663!1.56e-08!7;UBERON:0000349!3.45e-08!5;UBERON:0002771!5.04e-07!3|ontology_enrichment_uberon_v019=UBERON:0003112;2.25e-14;1!UBERON:0005705;2.25e-14;1!UBERON:0008193;2.25e-14;1!UBERON:0011158;2.25e-14;1!UBERON:0010912;2.25e-14;1!UBERON:0002514;2.25e-14;1!UBERON:0003457;2.25e-14;1!UBERON:0008907;2.25e-14;1!UBERON:0008001;2.25e-14;1!UBERON:0007213;2.25e-14;1!UBERON:0009891;2.25e-14;1!UBERON:0007914;2.25e-14;1!UBERON:0007375;2.25e-14;1!UBERON:0003323;2.25e-14;1!UBERON:0010258;2.25e-14;1!UBERON:0005253;2.25e-14;1!UBERON:0007842;2.25e-14;1!UBERON:0003128;2.25e-14;1!UBERON:0002397;2.25e-14;1!UBERON:0003113;2.25e-14;1!UBERON:0003277;2.25e-14;1!UBERON:0001703;2.25e-14;1!UBERON:0002241;2.25e-14;1!UBERON:0001709;2.25e-14;1!UBERON:0002244;2.25e-14;1!UBERON:0005620;2.25e-14;1!UBERON:0010364;2.25e-14;1!UBERON:0004288;2.25e-14;1!UBERON:0011159;2.17e-11;5!UBERON:0004089;7.78e-08;2|ontology_enrichment_uberon_v019_2=UBERON:0005253,5.34e-27,2;UBERON:0005705,1.84e-14,1;UBERON:0008193,1.84e-14,1;UBERON:0010912,1.84e-14,1;UBERON:0002514,1.84e-14,1;UBERON:0003457,1.84e-14,1;UBERON:0008907,1.84e-14,1;UBERON:0008001,1.84e-14,1;UBERON:0007213,1.84e-14,1;UBERON:0009891,1.84e-14,1;UBERON:0007914,1.84e-14,1;UBERON:0009292,1.84e-14,1;UBERON:0003099,1.84e-14,1;UBERON:0007375,1.84e-14,1;UBERON:0003323,1.84e-14,1;UBERON:0010258,1.84e-14,1;UBERON:0007842,1.84e-14,1;UBERON:0009494,1.84e-14,1;UBERON:0010042,1.84e-14,1;UBERON:0010045,1.84e-14,1;UBERON:0010259,1.84e-14,1;UBERON:0010359,1.84e-14,1;UBERON:0009526,1.84e-14,1;UBERON:0002397,1.84e-14,1;UBERON:0003113,1.84e-14,1;UBERON:0003277,1.84e-14,1;UBERON:0001709,1.84e-14,1;UBERON:0004066,1.84e-14,1;UBERON:0002244,1.84e-14,1;UBERON:0005620,1.84e-14,1;UBERON:0004362,1.84e-14,1;UBERON:0010364,1.84e-14,1;UBERON:0010046,1.84e-14,1;UBERON:0005868,1.84e-14,1;UBERON:0007238,1.84e-14,1;UBERON:0004288,1.84e-14,1;UBERON:0004068,1.84e-14,1;UBERON:0010334,1.84e-14,1;UBERON:0003852,1.84e-14,1;UBERON:0010253,1.84e-14,1;UBERON:0003112,2.41e-14,1;UBERON:0011158,2.41e-14,1;UBERON:0003128,2.41e-14,1;UBERON:0001703,2.41e-14,1;UBERON:0002241,2.41e-14,1;UBERON:0004761,2.41e-14,1;UBERON:0009617,2.41e-14,1;UBERON:0011159,2.06e-11,5;UBERON:0004089,7.03e-08,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0.247266929278557,0,0,0,0,0,0.4389776208808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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C132 | |||
|description=CAGE_peak_at_chr4:180980059..180980067,+ | |||
|id=chr4:180980059..180980067,+ | |||
|ontology_enrichment_celltype=CL:0000047!3.10e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000946;1.15e-14;1!CL:0000786;1.15e-14;1!CL:0000047;7.78e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,1.23e-14,1;CL:0000786,1.23e-14,1;CL:0000980,1.23e-14,1;CL:0000785,5.74e-08,2;CL:0000955,5.74e-08,2;CL:0000818,5.74e-08,2;CL:0000954,5.74e-08,2;CL:0000816,5.74e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.25e-14;1!UBERON:0003852;2.25e-14;1!CL:0000954;5.55e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:8692;8.58e-20;31!DOID:1240;2.86e-13;39!DOID:4231;7.78e-08;2!DOID:1907;7.78e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,8.80e-21,31;DOID:1240,2.02e-16,39;DOID:2531,1.96e-12,51;DOID:0060083,1.96e-12,51;DOID:4231,8.60e-08,2;DOID:1907,8.60e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002780!5.17e-34!41;UBERON:0001890!5.17e-34!41;UBERON:0006240!5.17e-34!41;UBERON:0003080!4.95e-33!42;UBERON:0001893!7.81e-33!34;UBERON:0001869!5.30e-32!32;UBERON:0002791!5.98e-31!33;UBERON:0001049!2.26e-30!57;UBERON:0005068!2.26e-30!57;UBERON:0006241!2.26e-30!57;UBERON:0007135!2.26e-30!57;UBERON:0001017!5.45e-28!82;UBERON:0005743!5.88e-28!86;UBERON:0000073!1.99e-27!94;UBERON:0001016!1.99e-27!94;UBERON:0002020!5.75e-27!34;UBERON:0003528!5.75e-27!34;UBERON:0003056!6.25e-26!61;UBERON:0002616!6.68e-25!59;UBERON:0002346!3.19e-23!90;UBERON:0002619!1.43e-22!22;UBERON:0000956!5.56e-22!25;UBERON:0000203!5.56e-22!25;UBERON:0003075!1.55e-21!86;UBERON:0007284!1.55e-21!86;UBERON:0000955!2.34e-21!69;UBERON:0006238!2.34e-21!69;UBERON:0001950!1.01e-18!20;UBERON:0000924!2.24e-18!173;UBERON:0006601!2.24e-18!173;UBERON:0004121!5.55e-17!169;UBERON:0000033!1.81e-16!123;UBERON:0000153!3.10e-16!129;UBERON:0007811!3.10e-16!129;UBERON:0007023!7.89e-15!115;UBERON:0001871!7.38e-10!7;UBERON:0002420!3.54e-09!9;UBERON:0007245!3.54e-09!9;UBERON:0010009!3.54e-09!9;UBERON:0010011!3.54e-09!9;UBERON:0000454!3.54e-09!9;UBERON:0000200!4.24e-09!6;UBERON:0009663!1.56e-08!7;UBERON:0000349!3.45e-08!5;UBERON:0002771!5.04e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003112;2.25e-14;1!UBERON:0005705;2.25e-14;1!UBERON:0008193;2.25e-14;1!UBERON:0011158;2.25e-14;1!UBERON:0010912;2.25e-14;1!UBERON:0002514;2.25e-14;1!UBERON:0003457;2.25e-14;1!UBERON:0008907;2.25e-14;1!UBERON:0008001;2.25e-14;1!UBERON:0007213;2.25e-14;1!UBERON:0009891;2.25e-14;1!UBERON:0007914;2.25e-14;1!UBERON:0007375;2.25e-14;1!UBERON:0003323;2.25e-14;1!UBERON:0010258;2.25e-14;1!UBERON:0005253;2.25e-14;1!UBERON:0007842;2.25e-14;1!UBERON:0003128;2.25e-14;1!UBERON:0002397;2.25e-14;1!UBERON:0003113;2.25e-14;1!UBERON:0003277;2.25e-14;1!UBERON:0001703;2.25e-14;1!UBERON:0002241;2.25e-14;1!UBERON:0001709;2.25e-14;1!UBERON:0002244;2.25e-14;1!UBERON:0005620;2.25e-14;1!UBERON:0010364;2.25e-14;1!UBERON:0004288;2.25e-14;1!UBERON:0011159;2.17e-11;5!UBERON:0004089;7.78e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005253,5.34e-27,2;UBERON:0005705,1.84e-14,1;UBERON:0008193,1.84e-14,1;UBERON:0010912,1.84e-14,1;UBERON:0002514,1.84e-14,1;UBERON:0003457,1.84e-14,1;UBERON:0008907,1.84e-14,1;UBERON:0008001,1.84e-14,1;UBERON:0007213,1.84e-14,1;UBERON:0009891,1.84e-14,1;UBERON:0007914,1.84e-14,1;UBERON:0009292,1.84e-14,1;UBERON:0003099,1.84e-14,1;UBERON:0007375,1.84e-14,1;UBERON:0003323,1.84e-14,1;UBERON:0010258,1.84e-14,1;UBERON:0007842,1.84e-14,1;UBERON:0009494,1.84e-14,1;UBERON:0010042,1.84e-14,1;UBERON:0010045,1.84e-14,1;UBERON:0010259,1.84e-14,1;UBERON:0010359,1.84e-14,1;UBERON:0009526,1.84e-14,1;UBERON:0002397,1.84e-14,1;UBERON:0003113,1.84e-14,1;UBERON:0003277,1.84e-14,1;UBERON:0001709,1.84e-14,1;UBERON:0004066,1.84e-14,1;UBERON:0002244,1.84e-14,1;UBERON:0005620,1.84e-14,1;UBERON:0004362,1.84e-14,1;UBERON:0010364,1.84e-14,1;UBERON:0010046,1.84e-14,1;UBERON:0005868,1.84e-14,1;UBERON:0007238,1.84e-14,1;UBERON:0004288,1.84e-14,1;UBERON:0004068,1.84e-14,1;UBERON:0010334,1.84e-14,1;UBERON:0003852,1.84e-14,1;UBERON:0010253,1.84e-14,1;UBERON:0003112,2.41e-14,1;UBERON:0011158,2.41e-14,1;UBERON:0003128,2.41e-14,1;UBERON:0001703,2.41e-14,1;UBERON:0002241,2.41e-14,1;UBERON:0004761,2.41e-14,1;UBERON:0009617,2.41e-14,1;UBERON:0011159,2.06e-11,5;UBERON:0004089,7.03e-08,2 | |||
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|short_description=p@chr4:180980059..180980067,+ | |||
}} |
Revision as of 10:09, 13 September 2013
Short description: | p@chr4:180980059..180980067, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:180980059..180980067, + |
Coexpression cluster: | C132_acute_small_Dendritic_Macrophage_CD14_Neutrophils_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
antibody secreting cell | 1.23e-14 | 1 |
plasma cell | 1.23e-14 | 1 |
plasmablast | 1.23e-14 | 1 |
mature B cell | 5.74e-08 | 2 |
pre-B-II cell | 5.74e-08 | 2 |
transitional stage B cell | 5.74e-08 | 2 |
small pre-B-II cell | 5.74e-08 | 2 |
immature B cell | 5.74e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 8.80e-21 | 31 |
leukemia | 2.02e-16 | 39 |
hematologic cancer | 1.96e-12 | 51 |
immune system cancer | 1.96e-12 | 51 |
histiocytoma | 8.60e-08 | 2 |
malignant fibroxanthoma | 8.60e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.