FFCP PHASE1:Hg19::chr4:186696406..186696420,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=8470|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24098|TSSclassifier=S|UniProt=C9J348|association_with_transcript=9bp_to_ENST00000430503_5end|description=CAGE_peak_11_at_SORBS2_5end|id=chr4:186696406..186696420,-|ontology_enrichment_celltype=CL:0002139!9.18e-13!24;CL:0000115!1.36e-10!35;CL:0000071!1.58e-09!18;CL:0002546!1.58e-09!18;CL:0002078!2.77e-08!44|ontology_enrichment_celltype_v019=CL:0002139;2.47e-14;24!CL:0000115;8.92e-11;36!CL:0000071;8.89e-10;18!CL:0002078;5.65e-08;45!CL:1000413;5.86e-08;9|ontology_enrichment_celltype_v019_2=CL:0002139,2.32e-14,24;CL:0000115,1.02e-12,36;CL:0002078,2.34e-10,45;CL:0000071,8.29e-10,18;CL:0002546,8.29e-10,18;CL:1000413,4.54e-08,9|ontology_enrichment_development_v019=CL:0002546;8.89e-10;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000477!6.87e-33!286;UBERON:0004111!5.65e-24!241;UBERON:0007023!1.54e-22!115;UBERON:0000025!2.35e-20!194;UBERON:0000481!5.10e-18!347;UBERON:0000119!1.16e-16!312;UBERON:0000468!2.71e-16!659;UBERON:0002616!1.38e-15!59;UBERON:0000483!2.15e-15!309;UBERON:0005743!3.45e-15!86;UBERON:0003075!1.69e-14!86;UBERON:0007284!1.69e-14!86;UBERON:0000033!3.93e-14!123;UBERON:0001017!4.48e-14!82;UBERON:0001049!5.79e-14!57;UBERON:0005068!5.79e-14!57;UBERON:0006241!5.79e-14!57;UBERON:0007135!5.79e-14!57;UBERON:0000153!7.03e-14!129;UBERON:0007811!7.03e-14!129;UBERON:0002049!1.02e-13!79;UBERON:0007798!1.02e-13!79;UBERON:0000955!1.81e-13!69;UBERON:0006238!1.81e-13!69;UBERON:0000073!8.33e-13!94;UBERON:0001016!8.33e-13!94;UBERON:0002346!8.91e-13!90;UBERON:0000475!3.10e-11!365;UBERON:0000467!5.77e-11!625;UBERON:0000480!8.37e-11!626;UBERON:0000922!1.14e-10!612;UBERON:0001009!1.24e-10!113;UBERON:0003914!2.64e-10!118;UBERON:0003056!3.23e-10!61;UBERON:0000923!7.58e-10!604;UBERON:0005291!7.58e-10!604;UBERON:0006598!7.58e-10!604;UBERON:0002532!7.58e-10!604;UBERON:0004535!7.84e-10!110;UBERON:0002780!9.75e-10!41;UBERON:0001890!9.75e-10!41;UBERON:0006240!9.75e-10!41;UBERON:0002050!1.07e-09!605;UBERON:0005423!1.07e-09!605;UBERON:0002020!1.55e-09!34;UBERON:0003528!1.55e-09!34;UBERON:0001986!1.58e-09!18;UBERON:0004638!1.58e-09!18;UBERON:0004852!1.58e-09!18;UBERON:0000055!2.67e-09!69;UBERON:0001893!2.84e-09!34;UBERON:0003080!3.31e-09!42;UBERON:0002791!4.89e-09!33;UBERON:0001869!1.14e-08!32;UBERON:0000064!1.57e-08!219;UBERON:0004872!5.03e-08!84;UBERON:0004121!6.62e-08!169;UBERON:0001981!1.63e-07!60;UBERON:0007500!1.63e-07!60;UBERON:0004537!1.63e-07!60;UBERON:0006965!1.63e-07!60;UBERON:0000924!3.93e-07!173;UBERON:0006601!3.93e-07!173|ontology_enrichment_uberon_v019=UBERON:0004638;8.89e-10;18!UBERON:0001986;8.89e-10;18!UBERON:0004852;8.89e-10;18!UBERON:0003528;4.45e-09;34!UBERON:0002020;4.45e-09;34!UBERON:0002791;1.18e-08;32!UBERON:0001869;1.18e-08;32!UBERON:0001893;1.26e-08;34!UBERON:0003915;5.86e-08;9!UBERON:0004700;5.86e-08;9!UBERON:0001917;5.86e-08;9!UBERON:0000073;1.75e-07;53!UBERON:0002616;1.75e-07;53!UBERON:0000487;3.39e-07;22!UBERON:0002780;4.13e-07;41!UBERON:0001890;4.13e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.10e-18,114;UBERON:0004111,3.20e-16,240;UBERON:0000025,3.95e-16,192;UBERON:0003075,7.30e-14,82;UBERON:0007284,7.30e-14,82;UBERON:0001049,1.83e-13,56;UBERON:0005068,1.83e-13,56;UBERON:0006241,1.83e-13,56;UBERON:0007135,1.83e-13,56;UBERON:0000955,2.10e-13,68;UBERON:0006238,2.10e-13,68;UBERON:0000073,7.77e-13,53;UBERON:0002616,7.77e-13,53;UBERON:0002346,1.45e-12,86;UBERON:0002049,2.57e-12,78;UBERON:0007798,2.57e-12,78;UBERON:0001017,2.08e-11,81;UBERON:0010314,2.83e-11,132;UBERON:0000119,1.03e-10,309;UBERON:0003056,1.63e-10,61;UBERON:0003528,3.37e-10,34;UBERON:0002020,3.37e-10,34;UBERON:0001893,7.23e-10,34;UBERON:0004638,8.29e-10,18;UBERON:0001986,8.29e-10,18;UBERON:0004852,8.29e-10,18;UBERON:0001016,8.31e-10,89;UBERON:0001009,9.52e-10,112;UBERON:0002780,1.51e-09,41;UBERON:0001890,1.51e-09,41;UBERON:0003080,1.51e-09,41;UBERON:0006240,1.51e-09,41;UBERON:0000483,1.68e-09,306;UBERON:0011216,1.84e-09,223;UBERON:0004535,3.88e-09,109;UBERON:0001869,4.88e-09,32;UBERON:0002791,5.07e-09,32;UBERON:0010371,1.33e-08,104;UBERON:0003915,4.54e-08,9;UBERON:0004700,4.54e-08,9;UBERON:0001917,4.54e-08,9;UBERON:0000055,4.90e-08,68;UBERON:0000487,3.21e-07,22;UBERON:0003914,4.72e-07,117;UBERON:0006914,9.44e-07,25|phase1_expression=3.63356758541113,1.2846031433459,4.36958652697511,19.0139266870948,3.12872766099101,20.0637860543085,0,0,0,0,0,0,0,1.60896258848061,4.30816588446291,0.672325146451775,1.80808358407193,0,1.46379839637152,1.60057375499824,1.83600622119828,0.940364164434263,1.71741592278634,1.64249310087461,3.38965126905968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42938867502708,1.0843174571537,9.5254203020819,2.462390822334,7.15757352345989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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=8470 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24098 | |||
|TSSclassifier=S | |||
|UniProt=C9J348 | |||
|association_with_transcript=9bp_to_ENST00000430503_5end | |||
|description=CAGE_peak_11_at_SORBS2_5end | |||
|id=chr4:186696406..186696420,- | |||
|ontology_enrichment_celltype=CL:0002139!9.18e-13!24;CL:0000115!1.36e-10!35;CL:0000071!1.58e-09!18;CL:0002546!1.58e-09!18;CL:0002078!2.77e-08!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.47e-14;24!CL:0000115;8.92e-11;36!CL:0000071;8.89e-10;18!CL:0002078;5.65e-08;45!CL:1000413;5.86e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,2.32e-14,24;CL:0000115,1.02e-12,36;CL:0002078,2.34e-10,45;CL:0000071,8.29e-10,18;CL:0002546,8.29e-10,18;CL:1000413,4.54e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002546;8.89e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p11@SORBS2 | |||
}} |
Revision as of 10:20, 13 September 2013
Short description: | p11@SORBS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_SORBS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000430503_5end |
EntrezGene: | SORBS2 |
HGNC: | 24098 |
UniProt: | C9J348 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 2.32e-14 | 24 |
endothelial cell | 1.02e-12 | 36 |
meso-epithelial cell | 2.34e-10 | 45 |
blood vessel endothelial cell | 8.29e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.29e-10 | 18 |
endothelial cell of artery | 4.54e-08 | 9 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.