FFCP PHASE1:Mm9::chr15:50721616..50721632,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=83925|HGNC=|UniProt=G3UW90,Q8K1J0,Q5XK21|association_with_transcript=-29bp_to_ENSMUST00000077935,ENSMUST00000079901,ENSMUST00000165201,NM_032000,uc011zss.1,uc011zst.1_5end|description=CAGE_peak_4_at_Trps1_5end|id=chr15:50721616..50721632,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!5.99e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.94e-07,22|phase1_expression=0.960893082628764,0,0,0,0,0,0,1.54947988129892,2.67498572088167,0.70219357896598,0.513653904676515,0.0797721589953364,2.22560948910567,1.31130603628496,0,0.404950534779652,0,1.57731082679119,1.64537320326887,0.42438965179803,1.78590909317247,1.29078236561151,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,3.906676722619,0,4.1176204162171,3.41522742479223,0,1.6366586336825,1.62203089951223,1.28482726513177,0.782391344348039,0.218025156380447,1.09843091367236,0.972149495371417,0.139986421625363,0,0.838913030288682,0.725362142011344,2.01656279485478,0.771778308107841,3.43840127926508,4.12537673821954,0.809265843438391,1.5869729378161,0,0,0,0.899899717281399,0,0,0.898800331555214,3.84218305321555,1.14058573539325,0.810035629990144,0.841299845405528,2.85650984403804,1.32521124570968,0.61245399607477,0.670918297127655,1.83843757322004,0,1.65993539510744,2.30409799884365,1.05509030184155,0.457438218012048,1.04182674111352,2.23346399201105,2.25105044012672,2.90316670775939,1.76777151284201,3.98640706237488,2.42319279572891,0.151452386666368,0.302286240427142,4.34796733052517,0,0,0,0,0,1.26399978118577,2.38602451609281,1.55871602761721,1.41335829804136,0.422530259330042,8.98285341900225,17.8363667794652,0,0.865964164044856,0.253359865475099,1.51657333504435,1.7127581957859,3.88406825470758,1.92974780784272,1.38788261412909,0.304465478312141,1.38369298353635,0.753613202763113,1.41106448562846,0.879666139307728,0.247194967734374,1.3013942122792,0.884610551949874,2.91180329905337,2.87093973998512,3.39412677194655,1.86391761218122,3.22058876712702,2.51336048176146,0.255457055208591,2.87556298814209,1.19980546198682,1.39777249780371,1.64769703345305,1.83000241127451,1.25654352112864,3.82413504423008,4.09144731728529,2.49345653471472,2.27137768294861,2.44414473240759,2.61254638281195,2.27450482590307,2.10441855886474,1.17108398666433,0.919608417733892,1.0803727788321,1.80845781402858,1.42876648217788,1.92170580427275,2.90475346135159,4.13925393182425,3.44908788692548,3.78212160335639,5.45448484908241,3.5071317188412,5.83899223373756,6.61679116392116,9.87754254758129,1.99034266818493,0,1.28673953557358,2.55747149456033,1.44988040774851,1.64168241986767,0.36012412292203,1.42046841351126,1.18058539048442,1.54267112887378,0.930135779001631,1.07309360559848,1.28441876603886,0.16455984991348,0.985004784474571,1.54030738137126,1.60819986167866,1.3173006917463,1.47627060636409,3.99550902271842,2.36680608472354,0,0.528901133327089,2.98603550749328,1.85789337488351,2.96395161040815,1.21010114774006,1.11189021922435,0.570676878337677,0.949058123089023,0.823494773620054,0.251335208800269,0.397912944082302,0.779856348476481,0,0.432276099749388,0,0.569003702859245,2.97046132785295,4.50830942692322,4.07302655690629,4.26695471768777,1.61312385747733,3.22506339333712,3.09981310757165,4.86696056308262,1.97435462274881,0.296452627087149,0.333690211432188,0.393117990226406,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0,0.486405680325106,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,2.03228509183265,1.70542270593436,2.60743962307241,2.54617628662782,3.98973422090454,3.68513766371995,1.90434912708811,0.975668239288994,2.36452716159286,1.99318220683897,1.75400245523236,0.81931657357869,2.76295970985433,2.60368305446721,1.50791283939272,4.35124547054968,6.88469982226651,17.3840150171981,3.05046120976805,1.75817529888305,0.983609672260053,1.26235463602186,0.94652465824877,2.34263246577983,4.95473814785438,0.477937595905104,0.668396022247182,0.849229592366497,0.809621403349789,0.876767573733936,0.790575555893047,2.57057053137446,2.83880170416537,0.712262414669021,0.651547837414304,7.4236555337641,0,0.971122544619926,0.302323556964751,0.754420319023592,0.295301892880773,1.53717573971964,0,1.45413491791002,2.49548164869305,1.26414703174326,1.05418608574999,0,6.12791290356818,1.08036656418786,0.517434735131018,2.35770738534752,3.01478397191865,3.38900753443934,2.30368628842969,1.2178597964584,0.704015124191131,0.21183207086382,2.42581237860458,9.8931751764888,8.55761461488299,5.30753739367772,5.01363844813173,2.46211349617592,0.291480836629851,2.96680483216816,0.854354403989263,1.44470807574256,1.66675074632741,0.565105371014073,0.410082683163076,0.915112692826091,1.5298058699447,1.53946597556024,1.38199973804424,0,2.21435195506795,3.25311147402958,2.26811215725783,2.92723614420256,3.27543845619266,2.83215127408124,2.23164330458407,0.523511883968059,1.29614973291793,0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| ||
|EntrezGene=83925 | |||
|HGNC= | |||
|UniProt=G3UW90,Q8K1J0,Q5XK21 | |||
|association_with_transcript=-29bp_to_ENSMUST00000077935,ENSMUST00000079901,ENSMUST00000165201,NM_032000,uc011zss.1,uc011zst.1_5end | |||
|description=CAGE_peak_4_at_Trps1_5end | |||
|id=chr15:50721616..50721632,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!5.99e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.94e-07,22 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0,1.54947988129892,2.67498572088167,0.70219357896598,0.513653904676515,0.0797721589953364,2.22560948910567,1.31130603628496,0,0.404950534779652,0,1.57731082679119,1.64537320326887,0.42438965179803,1.78590909317247,1.29078236561151,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,1.25559489221072,3.906676722619,0,4.1176204162171,3.41522742479223,0,1.6366586336825,1.62203089951223,1.28482726513177,0.782391344348039,0.218025156380447,1.09843091367236,0.972149495371417,0.139986421625363,0,0.838913030288682,0.725362142011344,2.01656279485478,0.771778308107841,3.43840127926508,4.12537673821954,0.809265843438391,1.5869729378161,0,0,0,0.899899717281399,0,0,0.898800331555214,3.84218305321555,1.14058573539325,0.810035629990144,0.841299845405528,2.85650984403804,1.32521124570968,0.61245399607477,0.670918297127655,1.83843757322004,0,1.65993539510744,2.30409799884365,1.05509030184155,0.457438218012048,1.04182674111352,2.23346399201105,2.25105044012672,2.90316670775939,1.76777151284201,3.98640706237488,2.42319279572891,0.151452386666368,0.302286240427142,4.34796733052517,0,0,0,0,0,1.26399978118577,2.38602451609281,1.55871602761721,1.41335829804136,0.422530259330042,8.98285341900225,17.8363667794652,0,0.865964164044856,0.253359865475099,1.51657333504435,1.7127581957859,3.88406825470758,1.92974780784272,1.38788261412909,0.304465478312141,1.38369298353635,0.753613202763113,1.41106448562846,0.879666139307728,0.247194967734374,1.3013942122792,0.884610551949874,2.91180329905337,2.87093973998512,3.39412677194655,1.86391761218122,3.22058876712702,2.51336048176146,0.255457055208591,2.87556298814209,1.19980546198682,1.39777249780371,1.64769703345305,1.83000241127451,1.25654352112864,3.82413504423008,4.09144731728529,2.49345653471472,2.27137768294861,2.44414473240759,2.61254638281195,2.27450482590307,2.10441855886474,1.17108398666433,0.919608417733892,1.0803727788321,1.80845781402858,1.42876648217788,1.92170580427275,2.90475346135159,4.13925393182425,3.44908788692548,3.78212160335639,5.45448484908241,3.5071317188412,5.83899223373756,6.61679116392116,9.87754254758129,1.99034266818493,0,1.28673953557358,2.55747149456033,1.44988040774851,1.64168241986767,0.36012412292203,1.42046841351126,1.18058539048442,1.54267112887378,0.930135779001631,1.07309360559848,1.28441876603886,0.16455984991348,0.985004784474571,1.54030738137126,1.60819986167866,1.3173006917463,1.47627060636409,3.99550902271842,2.36680608472354,0,0.528901133327089,2.98603550749328,1.85789337488351,2.96395161040815,1.21010114774006,1.11189021922435,0.570676878337677,0.949058123089023,0.823494773620054,0.251335208800269,0.397912944082302,0.779856348476481,0,0.432276099749388,0,0.569003702859245,2.97046132785295,4.50830942692322,4.07302655690629,4.26695471768777,1.61312385747733,3.22506339333712,3.09981310757165,4.86696056308262,1.97435462274881,0.296452627087149,0.333690211432188,0.393117990226406,0.224862112384854,0.405720242777006,0.241177159752417,0.25462585178142,0,0.486405680325106,0.274561413188081,1.43768206527355,0.372140947668503,0.312037673114561,0,0,0,2.03228509183265,1.70542270593436,2.60743962307241,2.54617628662782,3.98973422090454,3.68513766371995,1.90434912708811,0.975668239288994,2.36452716159286,1.99318220683897,1.75400245523236,0.81931657357869,2.76295970985433,2.60368305446721,1.50791283939272,4.35124547054968,6.88469982226651,17.3840150171981,3.05046120976805,1.75817529888305,0.983609672260053,1.26235463602186,0.94652465824877,2.34263246577983,4.95473814785438,0.477937595905104,0.668396022247182,0.849229592366497,0.809621403349789,0.876767573733936,0.790575555893047,2.57057053137446,2.83880170416537,0.712262414669021,0.651547837414304,7.4236555337641,0,0.971122544619926,0.302323556964751,0.754420319023592,0.295301892880773,1.53717573971964,0,1.45413491791002,2.49548164869305,1.26414703174326,1.05418608574999,0,6.12791290356818,1.08036656418786,0.517434735131018,2.35770738534752,3.01478397191865,3.38900753443934,2.30368628842969,1.2178597964584,0.704015124191131,0.21183207086382,2.42581237860458,9.8931751764888,8.55761461488299,5.30753739367772,5.01363844813173,2.46211349617592,0.291480836629851,2.96680483216816,0.854354403989263,1.44470807574256,1.66675074632741,0.565105371014073,0.410082683163076,0.915112692826091,1.5298058699447,1.53946597556024,1.38199973804424,0,2.21435195506795,3.25311147402958,2.26811215725783,2.92723614420256,3.27543845619266,2.83215127408124,2.23164330458407,0.523511883968059,1.29614973291793,0.621339313086926,0,3.88743019714345,1.65458490457098,2.52786544847262,2.19571699912143,6.25137664315879,3.52071715937262,3.1249052362548,1.36317147753424,0.241584120826006,0,4.4241556887945,0.405450430580328,1.23253148597793,0.77952493786677,1.43221356533985,1.39076948346885,0.841368146639782,1.9199638532695,2.62512769865184,2.057583779685,2.21817607301049,3.8983152295901,2.21287235772758,5.72696820689688,10.6563280299149,0,0,0.167884616364078,3.67060228661162,3.75364950902364,3.47988086107804,9.432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| |||
|short_description=p4@Trps1 | |||
}} | |||
Revision as of 10:33, 13 September 2013
| Short description: | p4@Trps1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Trps1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -29bp_to_ENSMUST00000077935, ENSMUST00000079901, ENSMUST00000165201, NM_032000, uc011zss.1, uc011zst.1_5end |
| EntrezGene: | Trps1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| surface structure | 1.94e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
