FFCP PHASE1:Hg19::chr4:55523948..55523989,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3815|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6342|TSSclassifier=S|UniProt=P10721|association_with_transcript=-95bp_to_ENST00000288135,ENST00000412167_5end|coexpression_cluster_id=C12|description=CAGE_peak_3_at_KIT_5end|id=chr4:55523948..55523989,+|ontology_enrichment_celltype=CL:0002274!6.33e-13!5;CL:0000457!6.33e-13!5;CL:0002191!6.33e-13!5;CL:0000097!6.33e-13!5;CL:0000831!6.33e-13!5;CL:0002028!6.33e-13!5;CL:0000163!6.75e-07!9|ontology_enrichment_celltype_v019=CL:0000097;2.44e-195;5!CL:0000163;4.60e-109;9!CL:0000151;1.65e-25;36!CL:0000766;2.35e-09;69|ontology_enrichment_celltype_v019_2=CL:0000097,2.45e-195,5;CL:0002028,2.45e-195,5;CL:0000163,4.60e-109,9;CL:0000151,5.37e-28,36;CL:0000839,2.11e-15,66;CL:0000557,3.48e-15,67;CL:0000766,3.42e-14,72;CL:0000763,1.03e-09,108;CL:0000049,1.03e-09,108;CL:0002031,8.28e-09,120;CL:0000738,7.64e-08,136|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!7.84e-18!115;UBERON:0005743!1.32e-13!86;UBERON:0001049!4.53e-13!57;UBERON:0005068!4.53e-13!57;UBERON:0006241!4.53e-13!57;UBERON:0007135!4.53e-13!57;UBERON:0000073!1.43e-12!94;UBERON:0001016!1.43e-12!94;UBERON:0002616!1.95e-12!59;UBERON:0001017!3.29e-12!82;UBERON:0000955!8.15e-12!69;UBERON:0006238!8.15e-12!69;UBERON:0002020!9.50e-12!34;UBERON:0003528!9.50e-12!34;UBERON:0002346!1.27e-11!90;UBERON:0001869!3.97e-11!32;UBERON:0002619!5.20e-11!22;UBERON:0003075!2.79e-10!86;UBERON:0007284!2.79e-10!86;UBERON:0001893!2.83e-10!34;UBERON:0000956!2.08e-09!25;UBERON:0000203!2.08e-09!25;UBERON:0000033!2.53e-09!123;UBERON:0000153!2.66e-09!129;UBERON:0007811!2.66e-09!129;UBERON:0002791!2.94e-09!33;UBERON:0002780!3.35e-09!41;UBERON:0001890!3.35e-09!41;UBERON:0006240!3.35e-09!41;UBERON:0003080!6.78e-09!42;UBERON:0000924!2.18e-08!173;UBERON:0006601!2.18e-08!173;UBERON:0001950!2.26e-08!20;UBERON:0003056!1.19e-07!61;UBERON:0004121!2.00e-07!169|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.72e-13,76;UBERON:0001474,1.45e-12,82;UBERON:0004765,1.62e-11,90;UBERON:0002405,3.61e-11,93;UBERON:0002390,1.23e-10,98;UBERON:0003061,1.23e-10,98;UBERON:0001434,1.95e-10,100;UBERON:0002193,1.03e-09,108|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,2.95597942737566,2.46535615237033,2.69526550203004,2.73827911492227,3.40854570251226,0.317489471460845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0.324621940274555,0.280797178113459,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0.540911356951966,0.66614393599564,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0.216388639742091,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0.275078873194468,0,0,0,0.303747783290123,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0,0,0,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.33946505990805,0.425149840203366,0,0,0,0.0788617450012534,0,0,0,0.192687675289379,0,0,0.205116364240755,0.504143392443436,0.276629009856872,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0.235479278551542,0.628462359664008,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0,0,0,0,0,0.297046400327086,0,0.169927114687817,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0.190941474834495,0.202117188958219,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0|short_description=p3@KIT}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3815 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6342 | |||
|TSSclassifier=S | |||
|UniProt=P10721 | |||
|association_with_transcript=-95bp_to_ENST00000288135,ENST00000412167_5end | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_3_at_KIT_5end | |||
|id=chr4:55523948..55523989,+ | |||
|ontology_enrichment_celltype=CL:0002274!6.33e-13!5;CL:0000457!6.33e-13!5;CL:0002191!6.33e-13!5;CL:0000097!6.33e-13!5;CL:0000831!6.33e-13!5;CL:0002028!6.33e-13!5;CL:0000163!6.75e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;2.44e-195;5!CL:0000163;4.60e-109;9!CL:0000151;1.65e-25;36!CL:0000766;2.35e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.45e-195,5;CL:0002028,2.45e-195,5;CL:0000163,4.60e-109,9;CL:0000151,5.37e-28,36;CL:0000839,2.11e-15,66;CL:0000557,3.48e-15,67;CL:0000766,3.42e-14,72;CL:0000763,1.03e-09,108;CL:0000049,1.03e-09,108;CL:0002031,8.28e-09,120;CL:0000738,7.64e-08,136 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.84e-18!115;UBERON:0005743!1.32e-13!86;UBERON:0001049!4.53e-13!57;UBERON:0005068!4.53e-13!57;UBERON:0006241!4.53e-13!57;UBERON:0007135!4.53e-13!57;UBERON:0000073!1.43e-12!94;UBERON:0001016!1.43e-12!94;UBERON:0002616!1.95e-12!59;UBERON:0001017!3.29e-12!82;UBERON:0000955!8.15e-12!69;UBERON:0006238!8.15e-12!69;UBERON:0002020!9.50e-12!34;UBERON:0003528!9.50e-12!34;UBERON:0002346!1.27e-11!90;UBERON:0001869!3.97e-11!32;UBERON:0002619!5.20e-11!22;UBERON:0003075!2.79e-10!86;UBERON:0007284!2.79e-10!86;UBERON:0001893!2.83e-10!34;UBERON:0000956!2.08e-09!25;UBERON:0000203!2.08e-09!25;UBERON:0000033!2.53e-09!123;UBERON:0000153!2.66e-09!129;UBERON:0007811!2.66e-09!129;UBERON:0002791!2.94e-09!33;UBERON:0002780!3.35e-09!41;UBERON:0001890!3.35e-09!41;UBERON:0006240!3.35e-09!41;UBERON:0003080!6.78e-09!42;UBERON:0000924!2.18e-08!173;UBERON:0006601!2.18e-08!173;UBERON:0001950!2.26e-08!20;UBERON:0003056!1.19e-07!61;UBERON:0004121!2.00e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.72e-13,76;UBERON:0001474,1.45e-12,82;UBERON:0004765,1.62e-11,90;UBERON:0002405,3.61e-11,93;UBERON:0002390,1.23e-10,98;UBERON:0003061,1.23e-10,98;UBERON:0001434,1.95e-10,100;UBERON:0002193,1.03e-09,108 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0.115930404975077,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,2.95597942737566,2.46535615237033,2.69526550203004,2.73827911492227,3.40854570251226,0.317489471460845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,0.324621940274555,0.280797178113459,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0.540911356951966,0.66614393599564,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.317873157960757,0,0,0,0.216388639742091,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0,0.275078873194468,0,0,0,0.303747783290123,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0.488105059607853,0,0,0,0.124192805882767,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0.33946505990805,0.425149840203366,0,0,0,0.0788617450012534,0,0,0,0.192687675289379,0,0,0.205116364240755,0.504143392443436,0.276629009856872,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.135075169236789,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.131545547125698,0,0,0.235479278551542,0.628462359664008,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.452888530700021,0,0,0,0,0,0,0.297046400327086,0,0.169927114687817,0.0939839179798536,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0.0757786982182394,0,0,0,0,0.23806443146374,0,0,0,0.190941474834495,0.202117188958219,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |||
|short_description=p3@KIT | |||
}} |
Revision as of 11:08, 13 September 2013
Short description: | p3@KIT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_KIT_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | -95bp_to_ENST00000288135, ENST00000412167_5end |
EntrezGene: | KIT |
HGNC: | 6342 |
UniProt: | P10721 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.45e-195 | 5 |
basophil mast progenitor cell | 2.45e-195 | 5 |
endocrine cell | 4.60e-109 | 9 |
secretory cell | 5.37e-28 | 36 |
myeloid lineage restricted progenitor cell | 2.11e-15 | 66 |
granulocyte monocyte progenitor cell | 3.48e-15 | 67 |
myeloid leukocyte | 3.42e-14 | 72 |
myeloid cell | 1.03e-09 | 108 |
common myeloid progenitor | 1.03e-09 | 108 |
hematopoietic lineage restricted progenitor cell | 8.28e-09 | 120 |
leukocyte | 7.64e-08 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.72e-13 | 76 |
bone element | 1.45e-12 | 82 |
skeletal element | 1.62e-11 | 90 |
immune system | 3.61e-11 | 93 |
hematopoietic system | 1.23e-10 | 98 |
blood island | 1.23e-10 | 98 |
skeletal system | 1.95e-10 | 100 |
hemolymphoid system | 1.03e-09 | 108 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.