FFCP PHASE1:Mm9::chr16:11254343..11254357,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14852|HGNC=|UniProt=G3UWC0|association_with_transcript=5bp_to_ENSMUST00000167571_5end|description=CAGE_peak_5_at_Gspt1_5end|id=chr16:11254343..11254357,-|ontology_enrichment_celltype=CL:0000540!2.07e-10!33;CL:0000047!2.07e-10!33;CL:0000031!2.07e-10!33;CL:0000404!2.07e-10!33;CL:0000117!1.10e-08!23;CL:0000337!1.10e-08!23|ontology_enrichment_celltype_v019_2=CL:0000540,7.94e-11,33;CL:0000047,7.94e-11,33;CL:0000031,7.94e-11,33;CL:0000404,7.94e-11,33;CL:0000117,3.63e-09,23;CL:0000337,3.63e-09,23;CL:0000393,6.19e-07,39;CL:0000211,6.19e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!5.14e-07!71;UBERON:0003075!5.14e-07!71;UBERON:0007284!5.14e-07!71|ontology_enrichment_uberon_v019_2=|phase1_expression=0.80074423552397,1.39590163055744,1.36499771816861,0.90739263392049,2.50447864973174,1.34303417529512,1.86890112476421,1.42035655785734,0.281577444303333,0.70219357896598,0.34243593645101,1.19658238493005,0.684802919724823,0.437102012094987,1.99865857089398,1.21485160433896,0.699561878128147,0.788655413395594,0.822686601634433,1.27316895539409,1.36069264241712,0.695036658406197,0.261199789138935,0.639969691173627,0.91763712426868,0.57423196411502,1.29228598847722,0.646413698057667,0.760093677825496,2.01624103807945,1.33038306393183,0.635030673459631,1.23012957516914,0,1.73310971850765,0.664938581433969,1.42918549383658,0,0,1.0470474879476,0,0,0,0,0.506884656097573,0.183546752161682,0,1.96222640742402,0.219686182734472,0.58328969722285,0.699932108126813,0,1.34226084846189,1.45072428402269,1.00828139742739,0.257259436035947,0,0,2.02316460859598,1.5869729378161,1.90149421051854,0.677689064138264,0,0,0,0.7104801149461,0.599200221036809,0.768436610643109,3.11068836925433,1.62007125998029,2.10324961351382,2.85650984403804,1.32521124570968,2.20483438586917,2.1086003624012,2.75765635983006,3.30347642998166,1.14918604276669,1.53606533256243,2.76961204233407,1.46380229763855,2.6045668527838,1.67509799400829,1.12552522006336,1.98637722109853,2.06240009831567,4.27115042397309,3.16879057903011,0.908714319998209,1.13357340160178,0.579728977403356,0.860423876981386,0.679971333707751,1.61910957491345,0,2.68816132258401,1.54488862144927,0.340860645156116,0.779358013808606,0.70667914902068,0.563373679106722,1.28326477414318,0,0,1.5154372870785,1.26679932737549,1.01104889002957,1.59857431606684,0.258937883647172,1.03909497345377,1.73485326766136,0.913396434936424,2.07553947530453,1.3565037649736,0.587943535678524,2.76466500925286,0.741584903203122,0.578397427679647,1.76922110389975,2.26473589926373,1.10420759230197,0.969750506270444,0,0.878342391034642,3.35114730901528,1.27728527604296,0.479260498023681,0.599902730993408,0.254140454146129,1.79748767285787,1.37250180845588,2.1361239859187,0.695297280769106,2.30143911597297,1.45451631191692,1.94689515681309,1.32391173005411,0.622034853050465,1.0108910337347,1.68353484709179,0.910843100738926,3.21862946206862,1.62055916824814,0.753524089178575,1.76894897793452,1.66547836370305,1.96773621575431,1.03481348295606,2.15567992932842,1.51284864134255,1.58356011747554,2.6303487891309,1.66828349535359,1.74126083261083,1.23469281844766,0.59710280045548,0.702213187313235,1.80143534980301,1.13665399758237,2.27838349789052,0.938104239924385,1.2604344302271,1.89395788468168,0.983821158737019,1.23413690309903,0.232533944750408,1.07309360559848,0.934122738937356,2.46839774870221,0.656669856316381,0.729619285912702,1.02339991197733,1.09775057645525,1.07365135008297,1.05144974282064,2.26390147234426,1.32167513193519,1.05780226665418,1.70630600428187,2.55460339046482,1.80414445850931,1.21010114774006,1.33426826306922,0.760902504450237,0.949058123089023,0.329397909448022,0.754005626400808,0.596869416123452,0.974820435595601,3.59527763461689,0.432276099749388,1.39398891278057,1.13800740571849,1.71372768914593,1.1270773567308,1.4255592949172,1.55161989734101,1.19230893813542,1.58091342810643,1.32849133181642,0.627994911365499,1.1105744752962,2.07516838961004,1.83529616287703,1.76903095601883,0.449724224769707,1.62288097110802,0.964708639009667,1.78238096246994,1.43848068725405,1.13494658742525,1.09824565275233,1.43768206527355,1.11642284300551,0.624075346229121,1.76805214562978,2.51156378930677,0.964887042726734,0.554259570499814,1.89491411770485,1.14075483509418,1.35796068620151,1.87752198630802,1.17254380209271,0.476087281772027,1.36593553500459,0.945810864637146,0.664394068946325,0.956728611944923,0.491589944147214,0.863424909329478,0,0,0.54390568381871,2.45882136509518,1.10374698521893,2.24770825982909,1.40654023910644,0.655739781506702,0,2.52406575533005,2.34263246577983,1.72338718186239,2.15071918157297,1.78238939265915,1.41538265394416,1.61924280669958,2.04579100537918,1.18586333383957,0.642642632843614,0.851640511249612,1.06839362200353,0.488660878060728,0.494910368917606,1.32745138339963,1.21390318077491,1.51161778482376,0.943025398779491,1.18120757152309,2.15204603560749,1.03371317267288,0.363533729477506,1.7824868919236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| ||
|EntrezGene=14852 | |||
|HGNC= | |||
|UniProt=G3UWC0 | |||
|association_with_transcript=5bp_to_ENSMUST00000167571_5end | |||
|description=CAGE_peak_5_at_Gspt1_5end | |||
|id=chr16:11254343..11254357,- | |||
|ontology_enrichment_celltype=CL:0000540!2.07e-10!33;CL:0000047!2.07e-10!33;CL:0000031!2.07e-10!33;CL:0000404!2.07e-10!33;CL:0000117!1.10e-08!23;CL:0000337!1.10e-08!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.94e-11,33;CL:0000047,7.94e-11,33;CL:0000031,7.94e-11,33;CL:0000404,7.94e-11,33;CL:0000117,3.63e-09,23;CL:0000337,3.63e-09,23;CL:0000393,6.19e-07,39;CL:0000211,6.19e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!5.14e-07!71;UBERON:0003075!5.14e-07!71;UBERON:0007284!5.14e-07!71 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0.80074423552397,1.39590163055744,1.36499771816861,0.90739263392049,2.50447864973174,1.34303417529512,1.86890112476421,1.42035655785734,0.281577444303333,0.70219357896598,0.34243593645101,1.19658238493005,0.684802919724823,0.437102012094987,1.99865857089398,1.21485160433896,0.699561878128147,0.788655413395594,0.822686601634433,1.27316895539409,1.36069264241712,0.695036658406197,0.261199789138935,0.639969691173627,0.91763712426868,0.57423196411502,1.29228598847722,0.646413698057667,0.760093677825496,2.01624103807945,1.33038306393183,0.635030673459631,1.23012957516914,0,1.73310971850765,0.664938581433969,1.42918549383658,0,0,1.0470474879476,0,0,0,0,0.506884656097573,0.183546752161682,0,1.96222640742402,0.219686182734472,0.58328969722285,0.699932108126813,0,1.34226084846189,1.45072428402269,1.00828139742739,0.257259436035947,0,0,2.02316460859598,1.5869729378161,1.90149421051854,0.677689064138264,0,0,0,0.7104801149461,0.599200221036809,0.768436610643109,3.11068836925433,1.62007125998029,2.10324961351382,2.85650984403804,1.32521124570968,2.20483438586917,2.1086003624012,2.75765635983006,3.30347642998166,1.14918604276669,1.53606533256243,2.76961204233407,1.46380229763855,2.6045668527838,1.67509799400829,1.12552522006336,1.98637722109853,2.06240009831567,4.27115042397309,3.16879057903011,0.908714319998209,1.13357340160178,0.579728977403356,0.860423876981386,0.679971333707751,1.61910957491345,0,2.68816132258401,1.54488862144927,0.340860645156116,0.779358013808606,0.70667914902068,0.563373679106722,1.28326477414318,0,0,1.5154372870785,1.26679932737549,1.01104889002957,1.59857431606684,0.258937883647172,1.03909497345377,1.73485326766136,0.913396434936424,2.07553947530453,1.3565037649736,0.587943535678524,2.76466500925286,0.741584903203122,0.578397427679647,1.76922110389975,2.26473589926373,1.10420759230197,0.969750506270444,0,0.878342391034642,3.35114730901528,1.27728527604296,0.479260498023681,0.599902730993408,0.254140454146129,1.79748767285787,1.37250180845588,2.1361239859187,0.695297280769106,2.30143911597297,1.45451631191692,1.94689515681309,1.32391173005411,0.622034853050465,1.0108910337347,1.68353484709179,0.910843100738926,3.21862946206862,1.62055916824814,0.753524089178575,1.76894897793452,1.66547836370305,1.96773621575431,1.03481348295606,2.15567992932842,1.51284864134255,1.58356011747554,2.6303487891309,1.66828349535359,1.74126083261083,1.23469281844766,0.59710280045548,0.702213187313235,1.80143534980301,1.13665399758237,2.27838349789052,0.938104239924385,1.2604344302271,1.89395788468168,0.983821158737019,1.23413690309903,0.232533944750408,1.07309360559848,0.934122738937356,2.46839774870221,0.656669856316381,0.729619285912702,1.02339991197733,1.09775057645525,1.07365135008297,1.05144974282064,2.26390147234426,1.32167513193519,1.05780226665418,1.70630600428187,2.55460339046482,1.80414445850931,1.21010114774006,1.33426826306922,0.760902504450237,0.949058123089023,0.329397909448022,0.754005626400808,0.596869416123452,0.974820435595601,3.59527763461689,0.432276099749388,1.39398891278057,1.13800740571849,1.71372768914593,1.1270773567308,1.4255592949172,1.55161989734101,1.19230893813542,1.58091342810643,1.32849133181642,0.627994911365499,1.1105744752962,2.07516838961004,1.83529616287703,1.76903095601883,0.449724224769707,1.62288097110802,0.964708639009667,1.78238096246994,1.43848068725405,1.13494658742525,1.09824565275233,1.43768206527355,1.11642284300551,0.624075346229121,1.76805214562978,2.51156378930677,0.964887042726734,0.554259570499814,1.89491411770485,1.14075483509418,1.35796068620151,1.87752198630802,1.17254380209271,0.476087281772027,1.36593553500459,0.945810864637146,0.664394068946325,0.956728611944923,0.491589944147214,0.863424909329478,0,0,0.54390568381871,2.45882136509518,1.10374698521893,2.24770825982909,1.40654023910644,0.655739781506702,0,2.52406575533005,2.34263246577983,1.72338718186239,2.15071918157297,1.78238939265915,1.41538265394416,1.61924280669958,2.04579100537918,1.18586333383957,0.642642632843614,0.851640511249612,1.06839362200353,0.488660878060728,0.494910368917606,1.32745138339963,1.21390318077491,1.51161778482376,0.943025398779491,1.18120757152309,2.15204603560749,1.03371317267288,0.363533729477506,1.78248689192361,0.948110273807448,0,0,1.70219802876894,1.26042765821917,0.905510786479282,1.71469628025274,0.886701168211368,1.07021290561242,0.822745103010605,0.304464949114599,0.469343416127421,0.847328283455281,0.661585194164886,0.32977250588296,0.645857706783622,1.26657142349127,0.954978752025092,0.492422699235184,1.1659233465194,0.927126510052548,1.36696704638282,2.88941615148511,1.11116716421827,1.13021074202815,1.50363650493128,0.457556346413045,1.01987057996313,0.979660166265606,0.138199973804424,0,2.05618395827738,1.42323626988794,0.756037385752609,1.25452977608681,0.436725127492355,0.674321731924103,1.32245529160537,0.785267825952089,0.518459893167171,1.24267862617385,3.38215763210514,1.64468200648377,0.827292452285488,1.75006069509643,1.54991788173277,1.35164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| |||
|short_description=p5@Gspt1 | |||
}} | |||
Revision as of 11:58, 13 September 2013
| Short description: | p5@Gspt1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Gspt1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 5bp_to_ENSMUST00000167571_5end |
| EntrezGene: | Gspt1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuron | 7.94e-11 | 33 |
| neuronal stem cell | 7.94e-11 | 33 |
| neuroblast | 7.94e-11 | 33 |
| electrically signaling cell | 7.94e-11 | 33 |
| CNS neuron (sensu Vertebrata) | 3.63e-09 | 23 |
| neuroblast (sensu Vertebrata) | 3.63e-09 | 23 |
| electrically responsive cell | 6.19e-07 | 39 |
| electrically active cell | 6.19e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
