FFCP PHASE1:Hg19::chr5:102201491..102201500,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5066|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=8596|TSSclassifier=S|UniProt=F8W8D9|association_with_transcript=-22bp_to_ENST00000345721,ENST00000513648_5end|description=CAGE_peak_11_at_PAM_5end|id=chr5:102201491..102201500,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002615;2.74e-09;3!CL:0000511;1.39e-07;1!CL:0002625;1.39e-07;1!CL:0000216;1.39e-07;1!CL:0002591;1.39e-07;1|ontology_enrichment_celltype_v019_2=CL:0002615,4.01e-09,3;CL:0000511,6.80e-08,1;CL:0002625,6.80e-08,1;CL:0000216,6.80e-08,1;CL:0002591,1.58e-07,1|ontology_enrichment_development_v019=UBERON:0005062;1.17e-14;4!UBERON:0007284;1.17e-14;4!UBERON:0000358;4.40e-08;1!UBERON:0003099;1.39e-07;1!UBERON:0003852;1.39e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0050619;1.39e-07;1!DOID:1357;1.39e-07;1|ontology_enrichment_disease_v019_2=DOID:0050619,8.84e-08,1;DOID:1357,8.84e-08,1|ontology_enrichment_uberon=UBERON:0007023!6.99e-09!115;UBERON:0005743!2.63e-08!86;UBERON:0000475!5.47e-08!365;UBERON:0000073!1.29e-07!94;UBERON:0001016!1.29e-07!94;UBERON:0001017!1.43e-07!82;UBERON:0003075!3.66e-07!86;UBERON:0007284!3.66e-07!86|ontology_enrichment_uberon_v019=UBERON:0010313;1.82e-15;10!UBERON:0000007;6.23e-14;2!UBERON:0002133;1.73e-13;2!UBERON:0003978;2.74e-09;3!UBERON:0000946;2.74e-09;3!UBERON:0007029;1.39e-07;1!UBERON:0006834;1.39e-07;1!UBERON:0002135;1.39e-07;1!UBERON:0002134;1.39e-07;1!UBERON:0001136;1.39e-07;1!UBERON:0001301;1.39e-07;1!UBERON:0001343;1.39e-07;1!UBERON:0001764;1.39e-07;1!UBERON:0005705;1.39e-07;1!UBERON:0008193;1.39e-07;1!UBERON:0001825;1.39e-07;1!UBERON:0010912;1.39e-07;1!UBERON:0005208;1.39e-07;1!UBERON:0002514;1.39e-07;1!UBERON:0003457;1.39e-07;1!UBERON:0008907;1.39e-07;1!UBERON:0008001;1.39e-07;1!UBERON:0007213;1.39e-07;1!UBERON:0009891;1.39e-07;1!UBERON:0007914;1.39e-07;1!UBERON:0004910;1.39e-07;1!UBERON:0007375;1.39e-07;1!UBERON:0003323;1.39e-07;1!UBERON:0010258;1.39e-07;1!UBERON:0004145;1.39e-07;1!UBERON:0005946;1.39e-07;1!UBERON:0005253;1.39e-07;1!UBERON:0007842;1.39e-07;1!UBERON:0004813;1.39e-07;1!UBERON:0005965;1.39e-07;1!UBERON:0002397;1.39e-07;1!UBERON:0003113;1.39e-07;1!UBERON:0003277;1.39e-07;1!UBERON:0001709;1.39e-07;1!UBERON:0002078;1.39e-07;1!UBERON:0002244;1.39e-07;1!UBERON:0005620;1.39e-07;1!UBERON:0010364;1.39e-07;1!UBERON:0004288;1.39e-07;1!UBERON:0003296;2.17e-07;4!UBERON:0010133;2.17e-07;4!UBERON:0005904;3.59e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0010313,2.14e-15,10;UBERON:0002342,2.14e-15,10;UBERON:0005062,2.14e-15,10;UBERON:0000007,6.69e-14,2;UBERON:0002133,7.14e-14,2;UBERON:0003978,1.53e-09,3;UBERON:0009751,1.53e-09,3;UBERON:0000946,1.53e-09,3;UBERON:0002523,1.53e-09,3;UBERON:0005983,1.53e-09,3;UBERON:0002165,1.53e-09,3;UBERON:0002062,1.53e-09,3;UBERON:0007280,1.53e-09,3;UBERON:0004145,2.14e-09,3;UBERON:0007029,5.96e-08,1;UBERON:0001136,6.80e-08,1;UBERON:0001343,6.80e-08,1;UBERON:0004910,6.80e-08,1;UBERON:0005154,6.80e-08,1;UBERON:0005295,6.80e-08,1;UBERON:0004813,6.80e-08,1;UBERON:0005297,6.80e-08,1;UBERON:0005294,6.80e-08,1;UBERON:0010141,6.80e-08,1;UBERON:0005891,6.80e-08,1;UBERON:0001301,7.26e-08,1;UBERON:0002134,8.28e-08,1;UBERON:0005208,8.28e-08,1;UBERON:0005946,8.28e-08,1;UBERON:0005965,8.28e-08,1;UBERON:0002078,8.28e-08,1;UBERON:0001764,8.84e-08,1;UBERON:0001825,8.84e-08,1;UBERON:0002135,9.44e-08,1;UBERON:0006834,1.39e-07,1;UBERON:0005904,1.86e-07,4;UBERON:0003296,2.25e-07,4;UBERON:0010133,2.25e-07,4;UBERON:0005705,2.31e-07,1;UBERON:0008193,2.31e-07,1;UBERON:0010912,2.31e-07,1;UBERON:0002514,2.31e-07,1;UBERON:0003457,2.31e-07,1;UBERON:0008907,2.31e-07,1;UBERON:0008001,2.31e-07,1;UBERON:0007213,2.31e-07,1;UBERON:0009891,2.31e-07,1;UBERON:0007914,2.31e-07,1;UBERON:0009292,2.31e-07,1;UBERON:0003099,2.31e-07,1;UBERON:0007375,2.31e-07,1;UBERON:0003323,2.31e-07,1;UBERON:0010258,2.31e-07,1;UBERON:0007842,2.31e-07,1;UBERON:0009494,2.31e-07,1;UBERON:0010042,2.31e-07,1;UBERON:0010045,2.31e-07,1;UBERON:0010259,2.31e-07,1;UBERON:0010359,2.31e-07,1;UBERON:0009526,2.31e-07,1;UBERON:0002397,2.31e-07,1;UBERON:0003113,2.31e-07,1;UBERON:0003277,2.31e-07,1;UBERON:0001709,2.31e-07,1;UBERON:0004066,2.31e-07,1;UBERON:0002244,2.31e-07,1;UBERON:0005620,2.31e-07,1;UBERON:0004362,2.31e-07,1;UBERON:0010364,2.31e-07,1;UBERON:0010046,2.31e-07,1;UBERON:0005868,2.31e-07,1;UBERON:0007238,2.31e-07,1;UBERON:0004288,2.31e-07,1;UBERON:0004068,2.31e-07,1;UBERON:0010334,2.31e-07,1;UBERON:0003852,2.31e-07,1;UBERON:0010253,2.31e-07,1|phase1_expression=1.09007027562334,0.428201047781966,0.845726424575827,1.0007329835313,1.34088328328186,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0.247532705920093,0,0,0,0,0.487932798790507,0.738726348460727,0.204000691244253,0,0,0,0.376627918784408,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5066 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8596 | |||
|TSSclassifier=S | |||
|UniProt=F8W8D9 | |||
|association_with_transcript=-22bp_to_ENST00000345721,ENST00000513648_5end | |||
|description=CAGE_peak_11_at_PAM_5end | |||
|id=chr5:102201491..102201500,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002615;2.74e-09;3!CL:0000511;1.39e-07;1!CL:0002625;1.39e-07;1!CL:0000216;1.39e-07;1!CL:0002591;1.39e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,4.01e-09,3;CL:0000511,6.80e-08,1;CL:0002625,6.80e-08,1;CL:0000216,6.80e-08,1;CL:0002591,1.58e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.17e-14;4!UBERON:0007284;1.17e-14;4!UBERON:0000358;4.40e-08;1!UBERON:0003099;1.39e-07;1!UBERON:0003852;1.39e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0050619;1.39e-07;1!DOID:1357;1.39e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,8.84e-08,1;DOID:1357,8.84e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.99e-09!115;UBERON:0005743!2.63e-08!86;UBERON:0000475!5.47e-08!365;UBERON:0000073!1.29e-07!94;UBERON:0001016!1.29e-07!94;UBERON:0001017!1.43e-07!82;UBERON:0003075!3.66e-07!86;UBERON:0007284!3.66e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0010313;1.82e-15;10!UBERON:0000007;6.23e-14;2!UBERON:0002133;1.73e-13;2!UBERON:0003978;2.74e-09;3!UBERON:0000946;2.74e-09;3!UBERON:0007029;1.39e-07;1!UBERON:0006834;1.39e-07;1!UBERON:0002135;1.39e-07;1!UBERON:0002134;1.39e-07;1!UBERON:0001136;1.39e-07;1!UBERON:0001301;1.39e-07;1!UBERON:0001343;1.39e-07;1!UBERON:0001764;1.39e-07;1!UBERON:0005705;1.39e-07;1!UBERON:0008193;1.39e-07;1!UBERON:0001825;1.39e-07;1!UBERON:0010912;1.39e-07;1!UBERON:0005208;1.39e-07;1!UBERON:0002514;1.39e-07;1!UBERON:0003457;1.39e-07;1!UBERON:0008907;1.39e-07;1!UBERON:0008001;1.39e-07;1!UBERON:0007213;1.39e-07;1!UBERON:0009891;1.39e-07;1!UBERON:0007914;1.39e-07;1!UBERON:0004910;1.39e-07;1!UBERON:0007375;1.39e-07;1!UBERON:0003323;1.39e-07;1!UBERON:0010258;1.39e-07;1!UBERON:0004145;1.39e-07;1!UBERON:0005946;1.39e-07;1!UBERON:0005253;1.39e-07;1!UBERON:0007842;1.39e-07;1!UBERON:0004813;1.39e-07;1!UBERON:0005965;1.39e-07;1!UBERON:0002397;1.39e-07;1!UBERON:0003113;1.39e-07;1!UBERON:0003277;1.39e-07;1!UBERON:0001709;1.39e-07;1!UBERON:0002078;1.39e-07;1!UBERON:0002244;1.39e-07;1!UBERON:0005620;1.39e-07;1!UBERON:0010364;1.39e-07;1!UBERON:0004288;1.39e-07;1!UBERON:0003296;2.17e-07;4!UBERON:0010133;2.17e-07;4!UBERON:0005904;3.59e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010313,2.14e-15,10;UBERON:0002342,2.14e-15,10;UBERON:0005062,2.14e-15,10;UBERON:0000007,6.69e-14,2;UBERON:0002133,7.14e-14,2;UBERON:0003978,1.53e-09,3;UBERON:0009751,1.53e-09,3;UBERON:0000946,1.53e-09,3;UBERON:0002523,1.53e-09,3;UBERON:0005983,1.53e-09,3;UBERON:0002165,1.53e-09,3;UBERON:0002062,1.53e-09,3;UBERON:0007280,1.53e-09,3;UBERON:0004145,2.14e-09,3;UBERON:0007029,5.96e-08,1;UBERON:0001136,6.80e-08,1;UBERON:0001343,6.80e-08,1;UBERON:0004910,6.80e-08,1;UBERON:0005154,6.80e-08,1;UBERON:0005295,6.80e-08,1;UBERON:0004813,6.80e-08,1;UBERON:0005297,6.80e-08,1;UBERON:0005294,6.80e-08,1;UBERON:0010141,6.80e-08,1;UBERON:0005891,6.80e-08,1;UBERON:0001301,7.26e-08,1;UBERON:0002134,8.28e-08,1;UBERON:0005208,8.28e-08,1;UBERON:0005946,8.28e-08,1;UBERON:0005965,8.28e-08,1;UBERON:0002078,8.28e-08,1;UBERON:0001764,8.84e-08,1;UBERON:0001825,8.84e-08,1;UBERON:0002135,9.44e-08,1;UBERON:0006834,1.39e-07,1;UBERON:0005904,1.86e-07,4;UBERON:0003296,2.25e-07,4;UBERON:0010133,2.25e-07,4;UBERON:0005705,2.31e-07,1;UBERON:0008193,2.31e-07,1;UBERON:0010912,2.31e-07,1;UBERON:0002514,2.31e-07,1;UBERON:0003457,2.31e-07,1;UBERON:0008907,2.31e-07,1;UBERON:0008001,2.31e-07,1;UBERON:0007213,2.31e-07,1;UBERON:0009891,2.31e-07,1;UBERON:0007914,2.31e-07,1;UBERON:0009292,2.31e-07,1;UBERON:0003099,2.31e-07,1;UBERON:0007375,2.31e-07,1;UBERON:0003323,2.31e-07,1;UBERON:0010258,2.31e-07,1;UBERON:0007842,2.31e-07,1;UBERON:0009494,2.31e-07,1;UBERON:0010042,2.31e-07,1;UBERON:0010045,2.31e-07,1;UBERON:0010259,2.31e-07,1;UBERON:0010359,2.31e-07,1;UBERON:0009526,2.31e-07,1;UBERON:0002397,2.31e-07,1;UBERON:0003113,2.31e-07,1;UBERON:0003277,2.31e-07,1;UBERON:0001709,2.31e-07,1;UBERON:0004066,2.31e-07,1;UBERON:0002244,2.31e-07,1;UBERON:0005620,2.31e-07,1;UBERON:0004362,2.31e-07,1;UBERON:0010364,2.31e-07,1;UBERON:0010046,2.31e-07,1;UBERON:0005868,2.31e-07,1;UBERON:0007238,2.31e-07,1;UBERON:0004288,2.31e-07,1;UBERON:0004068,2.31e-07,1;UBERON:0010334,2.31e-07,1;UBERON:0003852,2.31e-07,1;UBERON:0010253,2.31e-07,1 | |||
|phase1_expression=1.09007027562334,0.428201047781966,0.845726424575827,1.0007329835313,1.34088328328186,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0.247532705920093,0,0,0,0,0.487932798790507,0.738726348460727,0.204000691244253,0,0,0,0.376627918784408,0,0,0,0,0.383829398097213,0.154816123316076,0,0,0,0,0,0.880801318004542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.567208902984407,0,0.087834785693126,0.327447688744282,0,0,0.324547393654683,0,0,0,0,0,0.198762407366705,0,0,0,0.419499436209906,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0.573673241497627,0.709336764396714,0,0,0,0,0,0.163461903113459,1.05950199351452,0,0.234321431833797,0.312160076830321,0,0.298897361103602,0,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0.494533858557114,0,0,0,0.250237039743928,0,0,0,0.300476117813194,0,0.179389635688862,2.34913127700424,0.423863802319124,0.600182192168805,0.721367704669072,0.257640540045629,0.558350568994769,0,0.487185025805993,0,0.828449087780694,4.0411514204703,1.06502877754984,0.10075209822764,0.169560592310488,0,0,0,0.365921118388786,0.795178609928912,0.348581828608555,0.310983165046111,1.26160425437814,0.36497735907583,0,1.28648187638577,0,0.464367928031979,0,0,0,0.241011029883482,0.330881918197182,0,0,0,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0.0925884451585296,0,1.03993478527958,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0.285826432630578,0.112131084345361,0.87192013766656,0.22001485746285,0.387815147273333,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0.871533458600294,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.358121926479791,0,0.394061520403854,0.431255149719035,0,0,0,0.773288812777695,0.167516265334349,0,0,0,0,0.24538298343828,0,0,0.831883446123229,0.178428988797162,0.473107245101804,0.468565659970853,0,0,1.03473071292505,0,0.184369168541703,0.955719759148911,0.587403472388222,0.343143423810856,0,0,0.106727557803444,0,0,0,0.248107807818777,0.306923946576125,0.561320188866147,0.256278298511402,0.511707249066704,0.482561763430822,0,0,0.355123450626254,0.328508624055237,0.519254429183621,0,0,0,0.0920809889358963,0.114814448164607,0,0.262248829918848,0,0,0,0,0.105551628892876,0,0,0,0,0.541892875087706,0,0.254876273045038,0,0,0,0,0,0.656029291399411,0.325378394664303,0,0,0,0,0,1.6068392984416,0.386682873168488,0.154048617114644,0.15350367472613,0.137836572484531,0.644521469209642,0.290033387828457,0,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0.632758849437452,0.190630193923825,0,0,0,0,0.359744915166629,0,0.235624804691373,0,0,0,0,0.243713489631284,0,0.545999645631943,0,1.13008116620243,0,0,0.438450885253763,0,0,0,0,0,0.286822704408103,0.392996164052485,0,0.709522128141196,0.211107635297664,0.658589785919804,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228234679033192,0,0,0.169291777801603,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0.33307196799782,0,0.18714054040822,0.879049075631364,0.121360521749513,0,0.284136146806413,0,0.296964680832639,0,0.994147647766298,0.140669416410513,0,0,0,1.39473591775749,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0.173624994933292,0,0.482385754501632,0,0.110579259931225,0,0.219385397153973,0,0.139423744278603,2.23155749661011,0,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.326465616318295,0.141353071433941,0,0,0.353830258013357,0,0,0,0,0.202203398942031,0.802577647298789,0,0,0,0,0,0,0,0.63186579628488,0,0.207376382794494,0,0.330991955875499,0,0,0,0,0,0,0,1.57254001417827,0.171986032471617,0,0,0.0821154570532092,0.581934098930517,0,0.90392296312213,0,0,0,0,0.320635281006135,0.213452994739353,0.19980960958213,0.144090417154106,0.343609788497747,0.171594997861965,0,0,0,0.407712618220842,0.732219924186332,0.101998217636322,0.577901179803038,0.600420288709789,0.136905378891993,0,0,0,1.39641200636127,0,1.43574604915363,0,0,0.669514372325618,0.201550417460179,0,0,0,0,0,0,0,0.795229689809303,0.136203406111576,0.321506296930038,0.412618309791701,0.83088067605837,0,0,0.607495566580247,0.335434687599266,0.315222829196793,0.944182586429966,0,0,0,0.714695326373367,0,0.5085370753095,0,0,0.326587360109409,0,0,0.511164065356265,0.226624183040251,0.146552233678082,0,0.129282956361551,0,0.171086837884329,0,0.213574825135389,0.314408610199332,0,0,0,0,0,0,0,0.306345576763462,0.983617892129413,1.41348686625211,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0.149254802886874,0.233713309847224,0.554805861502613,0.189403005275089,0,0,0.457680136793847,0.151230923763239,0,0.147855149989634,0.159296767163702,0.449803112163605,0,0.829412415681711,0,0.521745061811734,0,0,0,0,0,0,0,0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| |||
|short_description=p11@PAM | |||
}} |
Revision as of 12:28, 13 September 2013
Short description: | p11@PAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_PAM_5end |
Coexpression cluster: | NA |
Association with transcript: | -22bp_to_ENST00000345721, ENST00000513648_5end |
EntrezGene: | PAM |
HGNC: | 8596 |
UniProt: | F8W8D9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 4.01e-09 | 3 |
androgen binding protein secreting cell | 6.80e-08 | 1 |
seminiferous tubule epithelial cell | 6.80e-08 | 1 |
Sertoli cell | 6.80e-08 | 1 |
smooth muscle cell of the pulmonary artery | 1.58e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 8.84e-08 | 1 |
maxillary sinus cancer | 8.84e-08 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.