FFCP PHASE1:Mm9::chr16:65815414..65815441,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=73569|HGNC=|MCL_coexpression_id=1698|UniProt=E9Q1Y1,P85442|association_with_transcript=-436bp_to_ENSMUST00000168064,NM_028572,uc007zqk.2_5end|description=CAGE_peak_2_at_Vgll3_5end|id=chr16:65815414..65815441,+|ontology_enrichment_celltype=CL:0000107!9.65e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,1.21e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!5.14e-07!11;UBERON:0002410!9.65e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000010,5.81e-08,11;UBERON:0002410,1.21e-07,9|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0.0992909512008853,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4924831548006,15.4092935453662,8.62669735159903,9.38869613217647,2.61630187656536,10.1055644057857,13.9989527333484,2.93971485413261,8.62515386189829,0,0,0,52.7381843873691,36.1032134322833,29.9089813520917,0.404632921719196,0.528990979272033,0,7.45457970552091,2.66788438833342,0,0.988866362566974,0.7104801149461,2.09720077362883,0.768436610643109,0.103689612308478,0,0,0.571301968807607,0.441737081903227,0,0,0,0,0.638436690425939,0,0.131886287730194,0,0,0,0,1.83357897332172,2.35702868378934,0.996601765593721,0.559198337475902,1.74170244666323,4.38315048619356,0,0,0,0,0,0,0.842666520790511,15.8500199997594,10.1316541795119,13.0735642568826,1.83096445709685,8.98285341900225,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,0.258937883647172,0.890652834388949,0.867426633830679,0.304465478312141,0.922461989024234,0.753613202763113,0.940709657085638,0.628332956648377,5.43828929015623,4.04878199375753,0,3.23533699894818,1.10420759230197,0.969750506270444,3.72783522436244,0,0,0,0,0,0,0.748953197024114,0.457500602818626,0.125654352112864,0.521472960576829,0.767146371990992,0.20778804455956,0.324482526135515,3.46253837091075,0.746441823660558,0.505445516867349,0.420883711772948,0.780722657776222,1.83921683546778,1.98068342785884,1.50704817835715,0.544291993210623,0.512454881139399,0.655912071918102,1.03481348295606,0.431135985865684,2.64748512234947,2.99116911078713,7.23345917010997,4.17070873838397,6.268538997399,4.93877127379064,0.995171334092466,0,0,0,0.207125772535502,0.703578179943289,0.900310307305074,0.710234206755631,0.983821158737019,1.3884040159864,1.16266972375204,1.07309360559848,2.6856028744449,2.79751744852917,1.47750717671186,2.43206428637567,1.75439984910399,2.19550115291051,2.68412837520744,1.05144974282064,0.205809224758569,0,0.528901133327089,0.639864751605702,0.928946687441754,1.28867461322093,0.403367049246685,1.55664630691409,1.71203063501303,0,0.494096864172033,0.502670417600539,0.198956472041151,0.58489226135736,0,0.648414149624083,0.398282546508734,0.948339504765408,0.571242563048644,0,0.814605311381257,0.775809948670503,1.26244475802573,1.26473074248515,1.18088118383682,1.8839847340965,0.370191491765402,0,0,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0.744281895337007,0,0,0.538192240565737,0.482443521363367,3.32555742299888,0.568474235311454,0.814824882210129,0.848725428875941,1.40814148973101,3.51763140627813,4.99891645860629,3.51240566144038,6.77831119656621,4.20782910332672,7.17546458958692,4.58817281204066,4.83517949224508,5.93061140184197,0,0,1.47529281905711,2.48343071674259,0.321101179975584,0.234423373184406,19.180388609071,3.02965112645248,10.0962630213202,10.5418460960092,5.17016154558717,9.55875191810208,14.0363164671908,6.51076020814315,11.7395103485719,14.3205370376543,11.0680577825027,0,5.53566332312248,0.712262414669021,1.46598263418218,2.3095817216155,0,2.18502572539483,2.41858845571801,2.07465587731488,1.47650946440386,3.68922177532713,2.58428293168221,1.81766864738753,1.42598951353889,1.26414703174326,1.05418608574999,2.06271086496374,0.340439605753788,0.540183282093931,0.258717367565509,0,0,0.713475270408282,0.658196082408484,0.913394847343798,14.0803024838226,8.68511490541663,0.882113592219848,4.122156323537,5.8127193610526,8.80568703951075,4.41677672811605,4.43180429311665,0,1.11255181206306,0.683483523191411,3.92135049130123,1.48155621895769,0.753473828018764,1.23024804948923,2.74533807847827,0,0,0,2.86401185404534,0.474503990371703,1.42323626988794,1.29606408986162,0.418176592028937,0.87345025498471,1.21377911746339,1.32245529160537,2.35580347785627,0.90730481304255,1.24267862617385,0,1.49516546043979,2.64733584731356,8.94475466382619,4.77891346867605,6.08242051766801,4.3422178298929,5.33837977860195,5.03324853243412,0.966336483304024,2.59227005632079,0.948033361884535,1.01362607645082,0.821687657318618,0.129920822977795,0,0,0.120195449519969,0,0.201932899896295,0.228620419965,0.100826185136841,0,0.192423683280659,0.350630706544707,1.13365191807606,2.21985953374065,1.07656627931371,3.02192309455341,13.9096507703177,23.0849444804954,2.74727436400898,1.50057865355346,1.00314420807073,0.564751842617067,0,0.572895513439397,0.171853182343688,0,1.5107877947794,0,0.45032120322422,0,0.51776031175182,0.93408612825759,1.59609949360412,3.41467211508268,3.40349403895612,2.30574478890781,2.38996560985018,2.22246727801615,2.47242068686673,1.28367683836726,0.758091635291392,2.5347929989024,2.64076877940507,2.80924522409647,2.30490548657529,2.81433797882505,3.33405583898152,2.43357084484197,1.54327376370964,3.29668720642645,2.50238164228475,1.02860775715625,1.77475806159337,4.05341522910446,2.0348498328526,2.82328141245992,1.94613598150856,2.74391959309159,3.15683653725411,2.8518863907631,2.24456908663095,2.37270036248348,1.77308068276014,1.22769312950907,2.01417893541756,2.70069255373598,4.24677982494508,1.87145286756327,2.57845264857958,2.86932498103265,4.41182838239031,1.62307484934295|short_description=p2@Vgll3}} | ||
|EntrezGene=73569 | |||
|HGNC= | |||
|MCL_coexpression_id=1698 | |||
|UniProt=E9Q1Y1,P85442 | |||
|association_with_transcript=-436bp_to_ENSMUST00000168064,NM_028572,uc007zqk.2_5end | |||
|description=CAGE_peak_2_at_Vgll3_5end | |||
|id=chr16:65815414..65815441,+ | |||
|ontology_enrichment_celltype=CL:0000107!9.65e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.21e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!5.14e-07!11;UBERON:0002410!9.65e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,5.81e-08,11;UBERON:0002410,1.21e-07,9 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0.0992909512008853,0.522399578277871,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.4924831548006,15.4092935453662,8.62669735159903,9.38869613217647,2.61630187656536,10.1055644057857,13.9989527333484,2.93971485413261,8.62515386189829,0,0,0,52.7381843873691,36.1032134322833,29.9089813520917,0.404632921719196,0.528990979272033,0,7.45457970552091,2.66788438833342,0,0.988866362566974,0.7104801149461,2.09720077362883,0.768436610643109,0.103689612308478,0,0,0.571301968807607,0.441737081903227,0,0,0,0,0.638436690425939,0,0.131886287730194,0,0,0,0,1.83357897332172,2.35702868378934,0.996601765593721,0.559198337475902,1.74170244666323,4.38315048619356,0,0,0,0,0,0,0.842666520790511,15.8500199997594,10.1316541795119,13.0735642568826,1.83096445709685,8.98285341900225,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,0.258937883647172,0.890652834388949,0.867426633830679,0.304465478312141,0.922461989024234,0.753613202763113,0.940709657085638,0.628332956648377,5.43828929015623,4.04878199375753,0,3.23533699894818,1.10420759230197,0.969750506270444,3.72783522436244,0,0,0,0,0,0,0.748953197024114,0.457500602818626,0.125654352112864,0.521472960576829,0.767146371990992,0.20778804455956,0.324482526135515,3.46253837091075,0.746441823660558,0.505445516867349,0.420883711772948,0.780722657776222,1.83921683546778,1.98068342785884,1.50704817835715,0.544291993210623,0.512454881139399,0.655912071918102,1.03481348295606,0.431135985865684,2.64748512234947,2.99116911078713,7.23345917010997,4.17070873838397,6.268538997399,4.93877127379064,0.995171334092466,0,0,0,0.207125772535502,0.703578179943289,0.900310307305074,0.710234206755631,0.983821158737019,1.3884040159864,1.16266972375204,1.07309360559848,2.6856028744449,2.79751744852917,1.47750717671186,2.43206428637567,1.75439984910399,2.19550115291051,2.68412837520744,1.05144974282064,0.205809224758569,0,0.528901133327089,0.639864751605702,0.928946687441754,1.28867461322093,0.403367049246685,1.55664630691409,1.71203063501303,0,0.494096864172033,0.502670417600539,0.198956472041151,0.58489226135736,0,0.648414149624083,0.398282546508734,0.948339504765408,0.571242563048644,0,0.814605311381257,0.775809948670503,1.26244475802573,1.26473074248515,1.18088118383682,1.8839847340965,0.370191491765402,0,0,0,0.224862112384854,0,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0.744281895337007,0,0,0.538192240565737,0.482443521363367,3.32555742299888,0.568474235311454,0.814824882210129,0.848725428875941,1.40814148973101,3.51763140627813,4.99891645860629,3.51240566144038,6.77831119656621,4.20782910332672,7.17546458958692,4.58817281204066,4.83517949224508,5.93061140184197,0,0,1.47529281905711,2.48343071674259,0.321101179975584,0.234423373184406,19.180388609071,3.02965112645248,10.0962630213202,10.5418460960092,5.17016154558717,9.55875191810208,14.0363164671908,6.51076020814315,11.7395103485719,14.3205370376543,11.0680577825027,0,5.53566332312248,0.712262414669021,1.46598263418218,2.3095817216155,0,2.18502572539483,2.41858845571801,2.07465587731488,1.47650946440386,3.68922177532713,2.58428293168221,1.81766864738753,1.42598951353889,1.26414703174326,1.05418608574999,2.06271086496374,0.340439605753788,0.540183282093931,0.258717367565509,0,0,0.713475270408282,0.658196082408484,0.913394847343798,14.0803024838226,8.68511490541663,0.882113592219848,4.122156323537,5.8127193610526,8.80568703951075,4.41677672811605,4.43180429311665,0,1.11255181206306,0.683483523191411,3.92135049130123,1.48155621895769,0.753473828018764,1.23024804948923,2.74533807847827,0,0,0,2.86401185404534,0.474503990371703,1.42323626988794,1.29606408986162,0.418176592028937,0.87345025498471,1.21377911746339,1.32245529160537,2.35580347785627,0.90730481304255,1.24267862617385,0,1.49516546043979,2.64733584731356,8.94475466382619,4.77891346867605,6.08242051766801,4.3422178298929,5.33837977860195,5.03324853243412,0.966336483304024,2.59227005632079,0.948033361884535,1.01362607645082,0.821687657318618,0.129920822977795,0,0,0.120195449519969,0,0.201932899896295,0.228620419965,0.100826185136841,0,0.192423683280659,0.350630706544707,1.13365191807606,2.21985953374065,1.07656627931371,3.02192309455341,13.9096507703177,23.0849444804954,2.74727436400898,1.50057865355346,1.00314420807073,0.564751842617067,0,0.572895513439397,0.171853182343688,0,1.5107877947794,0,0.45032120322422,0,0.51776031175182,0.93408612825759,1.59609949360412,3.41467211508268,3.40349403895612,2.30574478890781,2.38996560985018,2.22246727801615,2.47242068686673,1.28367683836726,0.758091635291392,2.5347929989024,2.64076877940507,2.80924522409647,2.30490548657529,2.81433797882505,3.33405583898152,2.43357084484197,1.54327376370964,3.29668720642645,2.50238164228475,1.02860775715625,1.77475806159337,4.05341522910446,2.0348498328526,2.82328141245992,1.94613598150856,2.74391959309159,3.15683653725411,2.8518863907631,2.24456908663095,2.37270036248348,1.77308068276014,1.22769312950907,2.01417893541756,2.70069255373598,4.24677982494508,1.87145286756327,2.57845264857958,2.86932498103265,4.41182838239031,1.62307484934295 | |||
|short_description=p2@Vgll3 | |||
}} |
Revision as of 13:00, 13 September 2013
Short description: | p2@Vgll3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Vgll3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1698 |
Association with transcript: | -436bp_to_ENSMUST00000168064, NM_028572, uc007zqk.2_5end |
EntrezGene: | Vgll3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.21e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 5.81e-08 | 11 |
autonomic nervous system | 1.21e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.