FFCP PHASE1:Mm9::chr17:25716106..25716154,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76483|HGNC=|MCL_coexpression_id=1533|UniProt=Q3U3R4,D6RDS1,F6RND1,Q3UQQ2|association_with_transcript=0bp_to_ENSMUST00000063344,ENSMUST00000115111,ENSMUST00000116641,ENSMUST00000126164,ENSMUST00000127280,ENSMUST00000128146,ENSMUST00000137201,ENSMUST00000142264,ENSMUST00000154842,ENSMUST00000164596,NM_029624,NR_045520,uc008bbc.2,uc008bbd.2,uc008bbe.2,uc008bbf.2_5end|description=CAGE_peak_1_at_Lmf1_5end|id=chr17:25716106..25716154,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003914!7.20e-10!47;UBERON:0004535!9.12e-08!23;UBERON:0001009!9.12e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0003914,7.20e-10,47;UBERON:0004535,9.12e-08,23;UBERON:0001009,9.12e-08,23|phase1_expression=29.6275367143869,23.0323769041978,35.0349414329943,12.7034968748869,6.01074875935617,30.3861482160521,39.7141489012394,27.6323912164973,7.74337971834167,8.89445200023575,19.0051944730311,19.3048624768714,26.8785145991993,25.4393371039282,10.3264026162855,10.3262386368811,9.09430441566591,29.8111746263535,27.1486578539363,32.6780031884483,69.9055845041794,33.3617596034975,34.4783721663395,41.1180526579055,61.9405058881359,37.3250776674763,33.1686737042488,39.2157643488318,25.4631382071541,19.6583501212746,45.8982157056481,27.9413496322238,29.5231098040594,0,26.5743490171173,29.0910629377362,31.0337421518801,4.18531630736908,3.1253413780952,5.75876118371178,3.52938892818609,1.36609096991689,3.88408282424923,46.0782353790613,41.6659187312205,40.7473789798933,60.244133514799,34.8840250208714,33.1726135929052,27.8034755676225,34.9966054063406,43.1257693094915,22.1473039996212,19.5847778343063,25.5431287348273,41.1615097657515,31.805211833202,34.5500301825886,15.9830004079082,25.3915670050576,17.1134478946668,36.5952094634663,43.5754450094458,58.9434314819316,84.0536408181928,68.9165711497717,55.1264203353865,60.3222739354841,15.3460626216547,15.9307007231395,17.4569717921647,28.2794474559766,35.5598350932098,15.4338407010842,15.9103481890272,15.6267193723704,35.2370819198044,27.9635270406561,26.5739302533301,22.420668914133,17.199676997253,21.8783615633839,35.4562408731754,23.6360296213306,29.4900618209243,26.8112012781038,22.3523538854592,20.5039390407831,15.22096485997,31.2866258842092,32.4648227345879,78.2985728053062,61.1974200336975,124.671437268336,120.208637227819,110.662641113042,57.72265667415,40.9032774187339,30.3949625385356,31.0938825569099,37.6051930803737,57.746914836443,12.7402619853323,14.2213340630666,17.5357743219083,13.6814327356553,15.6712577954583,45.3310002484668,49.4571357766098,38.8918404349841,29.6659908770092,28.010824004717,37.3597105554815,34.3647620459979,34.4534911907615,39.0823099035291,18.0452326446093,81.6986366597501,15.9229899350977,30.7357014900077,25.1759331044849,19.3950101254089,46.5979403045305,35.4264764383972,30.9981126083913,33.2094171771169,18.2118989248999,25.7958174327165,22.9997111002247,34.601637702514,43.9200578705881,16.5863744788981,35.2863369990321,31.9644321662913,33.8694512632083,35.3685953487712,18.5347642207576,26.74749868117,41.4465323831227,70.2875798660823,27.7156543510559,25.749035696549,30.0703756774933,29.5381442958002,30.8205341155515,40.6120493302974,33.7326208415024,45.2730898793277,18.7544153851573,34.7955187508787,37.829491695249,31.5641854695708,27.2486304241086,33.0839558196058,26.9574598694406,23.6850777514007,29.4929538671559,27.7935739683892,25.8588784449989,37.0755132838548,41.2765865566729,32.7712951859047,45.9284787035308,39.943139044723,37.7954426574077,51.855069679341,43.4602910267383,38.0655016116973,45.912198125861,46.9518947266212,46.8577719175046,45.0295961270024,57.9612304368374,53.9509803416694,43.7403093013385,19.0373532901676,22.1380584599145,30.6762657329711,24.7414370620871,34.3710274353449,34.9230820182873,38.7232367276818,40.9175600674561,44.1323452581137,27.5226855695817,37.7160606317985,31.668236308834,39.9902508802713,32.3640384617739,28.7622210769351,31.9884313814547,28.6763433486289,33.7608863696485,24.5634302110917,22.5415471346161,24.641810669283,24.6319658702885,26.3009324588695,32.0609243219984,51.5159416448812,48.0416107194607,50.5928372079382,107.908756259722,23.1914696945371,22.9974024282448,23.1607975756399,17.0402501966342,27.9765505312804,34.1198641387103,40.8528515180151,29.1843408195064,35.9675451276387,37.3797336971122,50.6111688829165,54.9186304681627,77.0365577738691,68.8886067924143,68.9894235549615,35.4726125119881,25.012866353704,30.4744505946588,26.8197235524797,25.5812370634467,34.6737952904559,37.1348079782181,22.8306367993625,25.8521636334153,25.4684393096091,29.0207678956627,27.3651735575282,33.6735714638496,26.9047248961612,30.1582567878545,31.5465296614852,64.4211197654937,76.1585419801062,43.0275581167282,38.5626448888348,35.7378180921152,43.6774704063565,32.4973465998744,31.2350995437311,33.6060500463166,32.021818925642,34.5337944827711,30.5722653251939,32.3848561339915,31.27137679651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| ||
|EntrezGene=76483 | |||
|HGNC= | |||
|MCL_coexpression_id=1533 | |||
|UniProt=Q3U3R4,D6RDS1,F6RND1,Q3UQQ2 | |||
|association_with_transcript=0bp_to_ENSMUST00000063344,ENSMUST00000115111,ENSMUST00000116641,ENSMUST00000126164,ENSMUST00000127280,ENSMUST00000128146,ENSMUST00000137201,ENSMUST00000142264,ENSMUST00000154842,ENSMUST00000164596,NM_029624,NR_045520,uc008bbc.2,uc008bbd.2,uc008bbe.2,uc008bbf.2_5end | |||
|description=CAGE_peak_1_at_Lmf1_5end | |||
|id=chr17:25716106..25716154,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!7.20e-10!47;UBERON:0004535!9.12e-08!23;UBERON:0001009!9.12e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,7.20e-10,47;UBERON:0004535,9.12e-08,23;UBERON:0001009,9.12e-08,23 | |||
|phase1_expression=29.6275367143869,23.0323769041978,35.0349414329943,12.7034968748869,6.01074875935617,30.3861482160521,39.7141489012394,27.6323912164973,7.74337971834167,8.89445200023575,19.0051944730311,19.3048624768714,26.8785145991993,25.4393371039282,10.3264026162855,10.3262386368811,9.09430441566591,29.8111746263535,27.1486578539363,32.6780031884483,69.9055845041794,33.3617596034975,34.4783721663395,41.1180526579055,61.9405058881359,37.3250776674763,33.1686737042488,39.2157643488318,25.4631382071541,19.6583501212746,45.8982157056481,27.9413496322238,29.5231098040594,0,26.5743490171173,29.0910629377362,31.0337421518801,4.18531630736908,3.1253413780952,5.75876118371178,3.52938892818609,1.36609096991689,3.88408282424923,46.0782353790613,41.6659187312205,40.7473789798933,60.244133514799,34.8840250208714,33.1726135929052,27.8034755676225,34.9966054063406,43.1257693094915,22.1473039996212,19.5847778343063,25.5431287348273,41.1615097657515,31.805211833202,34.5500301825886,15.9830004079082,25.3915670050576,17.1134478946668,36.5952094634663,43.5754450094458,58.9434314819316,84.0536408181928,68.9165711497717,55.1264203353865,60.3222739354841,15.3460626216547,15.9307007231395,17.4569717921647,28.2794474559766,35.5598350932098,15.4338407010842,15.9103481890272,15.6267193723704,35.2370819198044,27.9635270406561,26.5739302533301,22.420668914133,17.199676997253,21.8783615633839,35.4562408731754,23.6360296213306,29.4900618209243,26.8112012781038,22.3523538854592,20.5039390407831,15.22096485997,31.2866258842092,32.4648227345879,78.2985728053062,61.1974200336975,124.671437268336,120.208637227819,110.662641113042,57.72265667415,40.9032774187339,30.3949625385356,31.0938825569099,37.6051930803737,57.746914836443,12.7402619853323,14.2213340630666,17.5357743219083,13.6814327356553,15.6712577954583,45.3310002484668,49.4571357766098,38.8918404349841,29.6659908770092,28.010824004717,37.3597105554815,34.3647620459979,34.4534911907615,39.0823099035291,18.0452326446093,81.6986366597501,15.9229899350977,30.7357014900077,25.1759331044849,19.3950101254089,46.5979403045305,35.4264764383972,30.9981126083913,33.2094171771169,18.2118989248999,25.7958174327165,22.9997111002247,34.601637702514,43.9200578705881,16.5863744788981,35.2863369990321,31.9644321662913,33.8694512632083,35.3685953487712,18.5347642207576,26.74749868117,41.4465323831227,70.2875798660823,27.7156543510559,25.749035696549,30.0703756774933,29.5381442958002,30.8205341155515,40.6120493302974,33.7326208415024,45.2730898793277,18.7544153851573,34.7955187508787,37.829491695249,31.5641854695708,27.2486304241086,33.0839558196058,26.9574598694406,23.6850777514007,29.4929538671559,27.7935739683892,25.8588784449989,37.0755132838548,41.2765865566729,32.7712951859047,45.9284787035308,39.943139044723,37.7954426574077,51.855069679341,43.4602910267383,38.0655016116973,45.912198125861,46.9518947266212,46.8577719175046,45.0295961270024,57.9612304368374,53.9509803416694,43.7403093013385,19.0373532901676,22.1380584599145,30.6762657329711,24.7414370620871,34.3710274353449,34.9230820182873,38.7232367276818,40.9175600674561,44.1323452581137,27.5226855695817,37.7160606317985,31.668236308834,39.9902508802713,32.3640384617739,28.7622210769351,31.9884313814547,28.6763433486289,33.7608863696485,24.5634302110917,22.5415471346161,24.641810669283,24.6319658702885,26.3009324588695,32.0609243219984,51.5159416448812,48.0416107194607,50.5928372079382,107.908756259722,23.1914696945371,22.9974024282448,23.1607975756399,17.0402501966342,27.9765505312804,34.1198641387103,40.8528515180151,29.1843408195064,35.9675451276387,37.3797336971122,50.6111688829165,54.9186304681627,77.0365577738691,68.8886067924143,68.9894235549615,35.4726125119881,25.012866353704,30.4744505946588,26.8197235524797,25.5812370634467,34.6737952904559,37.1348079782181,22.8306367993625,25.8521636334153,25.4684393096091,29.0207678956627,27.3651735575282,33.6735714638496,26.9047248961612,30.1582567878545,31.5465296614852,64.4211197654937,76.1585419801062,43.0275581167282,38.5626448888348,35.7378180921152,43.6774704063565,32.4973465998744,31.2350995437311,33.6060500463166,32.021818925642,34.5337944827711,30.5722653251939,32.3848561339915,31.2713767965104,32.0183100136684,33.4174169078679,39.6012837731069,30.4492182271006,20.360869919197,34.1488154553148,69.0274719367807,41.5154887825018,30.2323556964751,39.7956718284945,64.0805107551277,45.5004018957013,22.7416897988035,40.3522439720031,37.7887221087805,48.3536239641798,61.1427929734993,68.0694585438033,42.8953903249773,30.0702027032288,34.1506925186472,30.6501960095177,32.4532627565361,39.4195086900576,35.5425884500581,40.7983031813563,28.395276675709,29.0209937083434,65.9379910184336,18.1374878235628,21.9591620306432,20.6270203254293,22.9194900486022,23.9645713627789,26.2332752966866,35.2308073819968,22.3840853845187,23.9408766837338,21.6677597022563,14.8811081033706,20.7775226135958,19.6749228957609,20.3974115992626,18.1936888020755,20.3153961492503,44.8695190467103,31.3172633645324,35.377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| |||
|short_description=p1@Lmf1 | |||
}} |
Revision as of 13:46, 13 September 2013
Short description: | p1@Lmf1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lmf1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1533 |
Association with transcript: | 0bp_to_ENSMUST00000063344, ENSMUST00000115111, ENSMUST00000116641, ENSMUST00000126164, ENSMUST00000127280, ENSMUST00000128146, ENSMUST00000137201, ENSMUST00000142264, ENSMUST00000154842, ENSMUST00000164596, NM_029624, NR_045520, uc008bbc.2, uc008bbd.2, uc008bbe.2, uc008bbf.2_5end |
EntrezGene: | Lmf1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 7.20e-10 | 47 |
cardiovascular system | 9.12e-08 | 23 |
circulatory system | 9.12e-08 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.