FFCP PHASE1:Mm9::chr17:26381063..26381122,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=106581|HGNC=|MCL_coexpression_id=12|UniProt=Q8C0Z1|association_with_transcript=0bp_to_ENSMUST00000118487,uc008bdv.1,uc008bdw.1_5end|description=CAGE_peak_1_at_Itfg3_5end|id=chr17:26381063..26381122,-|ontology_enrichment_celltype=CL:0000066!8.62e-08!25|ontology_enrichment_celltype_v019_2=CL:0000066,8.62e-08,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.12e-16!43;UBERON:0005409!3.96e-14!59;UBERON:0000344!1.81e-09!15;UBERON:0001242!2.73e-08!13;UBERON:0000060!2.73e-08!13;UBERON:0001262!2.73e-08!13;UBERON:0004786!2.73e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.86e-14,31;UBERON:0005409,1.11e-11,47;UBERON:0000344,1.81e-09,15;UBERON:0001242,2.73e-08,13;UBERON:0001262,2.73e-08,13;UBERON:0004786,2.73e-08,13|phase1_expression=22.5809874417759,384.919874626215,344.434424217879,557.139077227181,524.437829253825,86.4578250346232,92.5106056758282,5.55230290798778,5.490760163915,2.57470978954193,0.34243593645101,0.8774937489487,3.42401459862411,2.97229368224591,5.99597571268193,4.85940641735582,3.49780939064073,5.99378114180652,5.21034847701807,2.97072756258621,31.5510606460469,3.67376519443276,2.87319768052829,205.750255712321,212.203584987132,267.592095277599,256.734149710809,218.05688747812,228.028103347649,230.859598860097,140.133682734153,1.90509202037889,0.61506478758457,0,53.7264012737371,51.5327400611326,51.450677778117,30.5528090437943,19.533383613095,18.3233310390829,47.6467505305122,19.8083190637949,24.7610280045888,44.8192671993055,40.5507724878058,58.7349606917381,46.1610893165343,23.1106665763273,64.3680515412002,63.1897171991421,34.0167004549631,64.6886539642372,3.35565212115473,5.07753499407941,8.06625117941913,22.8960898071993,40.4012150313647,37.6440627362533,4.85559506063035,4.7609188134483,5.70448263155561,41.3390329124341,62.2506357277798,136.334807168132,201.728737963663,153.463704828358,97.0704358079631,133.323751946579,2.28117147078651,3.37514845829227,2.73422449756797,13.9968982357864,16.7860091123226,2.57230678351403,1.82106394934649,4.5960939330501,20.9220173898839,16.8547286272448,17.664751324468,6.06676923558892,5.48925861614458,4.68822033501084,19.821992929098,19.6966913511088,15.279824777681,10.0173719061047,10.6778760599327,5.21918448310842,8.85996461998253,16.2478854229589,26.3776684718527,31.8356834483113,39.4383373550495,49.1129904390414,63.6780889098716,67.2040330646003,52.8071019695387,42.2667199993583,27.5373164879041,29.6805242588686,32.1122997090832,42.3477375467249,84.0857291031931,56.8853362522665,16.4533191168523,19.2553497761075,21.2320266906209,84.8386226312616,12.1700805314171,42.8997781897344,12.8379141806941,28.3152894830291,28.5963216597513,29.3909149077614,42.4495232759894,38.70531012954,25.4610816766405,42.512210934454,9.73071607144862,25.5591622916907,23.4092009568017,25.6983884161668,188.255678830303,14.0534782565543,16.7557365450764,307.570294471144,6.70964697233154,5.39912457894067,8.13249453267614,19.0234112044125,12.3525162761029,2.89005009859588,7.82209440865244,9.97290283588289,20.778804455956,14.1149898868949,23.0156962301715,26.1254638281195,20.217820674694,64.1847660453746,11.7108398666433,11.9549094305406,14.5850325142333,19.1395118651358,18.2337817725559,23.5729245324124,25.4868690802462,49.153640440413,6.03590380211958,7.18603104637713,9.14945845652534,11.836569551089,20.5754964426942,37.2629818178718,44.4489414641158,18.7092210809384,2.80885274925294,4.37491442095016,7.38825098428541,9.73491130916859,11.7263029990548,13.3245925481151,17.2823656977203,16.3314312350345,15.1181770629631,23.7184623645416,17.7060444923749,22.068649707395,19.2535024398772,35.1318373129264,41.9125745352074,46.9301959635317,55.7657292839269,68.7136864053103,10.5144974282064,7.20332286654991,783.092515671601,169.777263797995,9.59797127408553,13.7019636397659,28.6085764135047,46.3872106633688,64.4896327150124,85.7917573767642,292.784430972964,181.004151241688,98.0207314321051,111.614580815086,90.0734082490335,256.163531466453,284.005397535348,338.739305805679,9.67306294860717,12.6815848996799,19.1603150644237,20.3651327845314,23.0803459729475,27.7737846765661,39.8390183882821,55.64902578831,73.4754046297634,68.6088231405211,47.4324203339438,6.00642380577939,9.04171377520734,7.87017393346988,12.1716072833102,16.6412240229168,25.7172110299234,17.2617682470486,25.6173658304556,31.5745625166294,27.3159592401974,49.1226050922424,44.9334249284967,37.3816739361725,37.1352645990358,63.2001012986011,34.3640933709885,7.76914788258988,9.94086356296358,13.9190970335654,7.74477819352057,17.0856382590652,17.139142143793,35.3191902622616,27.270879930371,36.0987444127503,31.7314989628399,35.0667493491679,41.0990256840832,38.1873514655191,147.775458260487,103.342079925555,11.3105782794378,25.3861806600354,32.7523203575096,28.9512865882742,22.1312176258512,50.9991272952833,20.1925260426404,34.3586094981042,31.4518160689886,32.021818925642,26.5130422158049,31.1384183867716,33.5992882390162,24.5494920645502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| ||
|EntrezGene=106581 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=Q8C0Z1 | |||
|association_with_transcript=0bp_to_ENSMUST00000118487,uc008bdv.1,uc008bdw.1_5end | |||
|description=CAGE_peak_1_at_Itfg3_5end | |||
|id=chr17:26381063..26381122,- | |||
|ontology_enrichment_celltype=CL:0000066!8.62e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.62e-08,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.12e-16!43;UBERON:0005409!3.96e-14!59;UBERON:0000344!1.81e-09!15;UBERON:0001242!2.73e-08!13;UBERON:0000060!2.73e-08!13;UBERON:0001262!2.73e-08!13;UBERON:0004786!2.73e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.86e-14,31;UBERON:0005409,1.11e-11,47;UBERON:0000344,1.81e-09,15;UBERON:0001242,2.73e-08,13;UBERON:0001262,2.73e-08,13;UBERON:0004786,2.73e-08,13 | |||
|phase1_expression=22.5809874417759,384.919874626215,344.434424217879,557.139077227181,524.437829253825,86.4578250346232,92.5106056758282,5.55230290798778,5.490760163915,2.57470978954193,0.34243593645101,0.8774937489487,3.42401459862411,2.97229368224591,5.99597571268193,4.85940641735582,3.49780939064073,5.99378114180652,5.21034847701807,2.97072756258621,31.5510606460469,3.67376519443276,2.87319768052829,205.750255712321,212.203584987132,267.592095277599,256.734149710809,218.05688747812,228.028103347649,230.859598860097,140.133682734153,1.90509202037889,0.61506478758457,0,53.7264012737371,51.5327400611326,51.450677778117,30.5528090437943,19.533383613095,18.3233310390829,47.6467505305122,19.8083190637949,24.7610280045888,44.8192671993055,40.5507724878058,58.7349606917381,46.1610893165343,23.1106665763273,64.3680515412002,63.1897171991421,34.0167004549631,64.6886539642372,3.35565212115473,5.07753499407941,8.06625117941913,22.8960898071993,40.4012150313647,37.6440627362533,4.85559506063035,4.7609188134483,5.70448263155561,41.3390329124341,62.2506357277798,136.334807168132,201.728737963663,153.463704828358,97.0704358079631,133.323751946579,2.28117147078651,3.37514845829227,2.73422449756797,13.9968982357864,16.7860091123226,2.57230678351403,1.82106394934649,4.5960939330501,20.9220173898839,16.8547286272448,17.664751324468,6.06676923558892,5.48925861614458,4.68822033501084,19.821992929098,19.6966913511088,15.279824777681,10.0173719061047,10.6778760599327,5.21918448310842,8.85996461998253,16.2478854229589,26.3776684718527,31.8356834483113,39.4383373550495,49.1129904390414,63.6780889098716,67.2040330646003,52.8071019695387,42.2667199993583,27.5373164879041,29.6805242588686,32.1122997090832,42.3477375467249,84.0857291031931,56.8853362522665,16.4533191168523,19.2553497761075,21.2320266906209,84.8386226312616,12.1700805314171,42.8997781897344,12.8379141806941,28.3152894830291,28.5963216597513,29.3909149077614,42.4495232759894,38.70531012954,25.4610816766405,42.512210934454,9.73071607144862,25.5591622916907,23.4092009568017,25.6983884161668,188.255678830303,14.0534782565543,16.7557365450764,307.570294471144,6.70964697233154,5.39912457894067,8.13249453267614,19.0234112044125,12.3525162761029,2.89005009859588,7.82209440865244,9.97290283588289,20.778804455956,14.1149898868949,23.0156962301715,26.1254638281195,20.217820674694,64.1847660453746,11.7108398666433,11.9549094305406,14.5850325142333,19.1395118651358,18.2337817725559,23.5729245324124,25.4868690802462,49.153640440413,6.03590380211958,7.18603104637713,9.14945845652534,11.836569551089,20.5754964426942,37.2629818178718,44.4489414641158,18.7092210809384,2.80885274925294,4.37491442095016,7.38825098428541,9.73491130916859,11.7263029990548,13.3245925481151,17.2823656977203,16.3314312350345,15.1181770629631,23.7184623645416,17.7060444923749,22.068649707395,19.2535024398772,35.1318373129264,41.9125745352074,46.9301959635317,55.7657292839269,68.7136864053103,10.5144974282064,7.20332286654991,783.092515671601,169.777263797995,9.59797127408553,13.7019636397659,28.6085764135047,46.3872106633688,64.4896327150124,85.7917573767642,292.784430972964,181.004151241688,98.0207314321051,111.614580815086,90.0734082490335,256.163531466453,284.005397535348,338.739305805679,9.67306294860717,12.6815848996799,19.1603150644237,20.3651327845314,23.0803459729475,27.7737846765661,39.8390183882821,55.64902578831,73.4754046297634,68.6088231405211,47.4324203339438,6.00642380577939,9.04171377520734,7.87017393346988,12.1716072833102,16.6412240229168,25.7172110299234,17.2617682470486,25.6173658304556,31.5745625166294,27.3159592401974,49.1226050922424,44.9334249284967,37.3816739361725,37.1352645990358,63.2001012986011,34.3640933709885,7.76914788258988,9.94086356296358,13.9190970335654,7.74477819352057,17.0856382590652,17.139142143793,35.3191902622616,27.270879930371,36.0987444127503,31.7314989628399,35.0667493491679,41.0990256840832,38.1873514655191,147.775458260487,103.342079925555,11.3105782794378,25.3861806600354,32.7523203575096,28.9512865882742,22.1312176258512,50.9991272952833,20.1925260426404,34.3586094981042,31.4518160689886,32.021818925642,26.5130422158049,31.1384183867716,33.5992882390162,24.5494920645502,33.204173347508,6.74774764485795,42.0142652216475,31.6956774527714,27.8536700494615,30.8494129958641,22.5666735177937,17.9657670754686,26.9067965698628,79.2141334974772,87.7046621855895,80.8554439092529,80.3711991753168,68.7078748712485,54.5440988928624,37.2923374364263,35.8423269154996,41.2542172992747,10.8940673841212,12.0640933000978,18.3689330971511,21.8623775732224,15.0739198595933,17.3017753074008,21.8850197400821,30.7509598605745,22.7631556821799,77.742370007022,18.0833286405069,69.9117712471875,66.2004149453213,44.6918773717635,68.8778424898097,64.0149509005739,244.843902769075,24.2907145633768,10.423123728669,15.4790150972417,9.4449208958553,10.1718966782533,6.97140561377228,10.066239621087,13.5982743995084,14.2750481370131,11.4705978257672,79.2376612952544,6.16855187483214,19.7219883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| |||
|short_description=p1@Itfg3 | |||
}} | |||
Revision as of 13:49, 13 September 2013
| Short description: | p1@Itfg3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Itfg3_5end |
| Coexpression cluster: | MCL_coexpression_mm9:12 |
| Association with transcript: | 0bp_to_ENSMUST00000118487, uc008bdv.1, uc008bdw.1_5end |
| EntrezGene: | Itfg3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 8.62e-08 | 25 |
| Ontology term | p-value | n |
|---|---|---|
| intestine | 1.86e-14 | 31 |
| gastrointestinal system | 1.11e-11 | 47 |
| mucosa | 1.81e-09 | 15 |
| intestinal mucosa | 2.73e-08 | 13 |
| wall of intestine | 2.73e-08 | 13 |
| gastrointestinal system mucosa | 2.73e-08 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
