FFCP PHASE1:Hg19::chr5:180022690..180022710,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C108|description=CAGE_peak_at_chr5:180022690..180022710,-|id=chr5:180022690..180022710,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002327;7.35e-18;4|ontology_enrichment_celltype_v019_2=CL:0002327,7.35e-18,4|ontology_enrichment_development_v019=UBERON:0008425;1.23e-66;1!UBERON:0006298;4.66e-66;1!UBERON:0006601;2.72e-07;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:5093;7.35e-18;4!DOID:1612;7.35e-18;4|ontology_enrichment_disease_v019_2=DOID:5093,7.35e-18,4;DOID:1612,7.35e-18,4|ontology_enrichment_uberon=UBERON:0001829!2.45e-26!2;UBERON:0000341!1.27e-25!2;UBERON:0003127!1.85e-25!2;UBERON:0001044!1.04e-19!6;UBERON:0003293!1.04e-19!6;UBERON:0003294!1.04e-19!6;UBERON:0010047!1.04e-19!6;UBERON:0000167!1.04e-19!6;UBERON:0001736!3.98e-14!1;UBERON:0006298!3.98e-14!1;UBERON:0001831!5.15e-14!1;UBERON:0001567!5.15e-14!1;UBERON:0008801!5.15e-14!1;UBERON:0003408!4.47e-12!10;UBERON:0003126!5.87e-08!7;UBERON:0001005!5.87e-08!7;UBERON:0001004!6.32e-08!72;UBERON:0007023!9.19e-08!115;UBERON:0004089!1.20e-07!2;UBERON:0002530!2.25e-07!59;UBERON:0000078!6.15e-07!18;UBERON:0002365!7.93e-07!31;UBERON:0002330!7.93e-07!31|ontology_enrichment_uberon_v019=UBERON:0001736;4.66e-66;1!UBERON:0001044;1.52e-44;6!UBERON:0003293;1.52e-44;6!UBERON:0003294;1.52e-44;6!UBERON:0010047;1.52e-44;6!UBERON:0003408;1.52e-44;6!UBERON:0000167;1.52e-44;6!UBERON:0001829;7.05e-34;2!UBERON:0001041;7.13e-20;14!UBERON:0002365;1.08e-19;31!UBERON:0002330;1.08e-19;31!UBERON:0001911;7.35e-18;4!UBERON:0000161;5.66e-15;19!UBERON:0000166;5.66e-15;19!UBERON:0000165;1.54e-10;28!UBERON:0000310;5.73e-08;10!UBERON:0004921;5.80e-08;33!UBERON:0002530;9.30e-08;57!UBERON:0001443;2.32e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0001736,4.66e-66,1;UBERON:0006298,4.66e-66,1;UBERON:0001044,1.52e-44,6;UBERON:0003293,1.52e-44,6;UBERON:0003294,1.52e-44,6;UBERON:0010047,1.52e-44,6;UBERON:0000167,1.52e-44,6;UBERON:0001829,7.05e-34,2;UBERON:0003408,2.72e-27,10;UBERON:0002365,3.79e-20,31;UBERON:0002330,3.79e-20,31;UBERON:0001911,7.35e-18,4;UBERON:0005333,7.35e-18,4;UBERON:0008425,7.35e-18,4;UBERON:0005311,7.35e-18,4;UBERON:0000166,4.26e-13,22;UBERON:0002530,3.99e-11,59;UBERON:0000165,3.24e-10,29;UBERON:0000930,3.24e-10,29;UBERON:0000076,1.24e-09,8;UBERON:0000161,1.92e-08,36;UBERON:0000310,5.73e-08,10;UBERON:0001443,2.32e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19807999981739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15113679410139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:180022690..180022710,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C108 | |||
|description=CAGE_peak_at_chr5:180022690..180022710,- | |||
|id=chr5:180022690..180022710,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002327;7.35e-18;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002327,7.35e-18,4 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.23e-66;1!UBERON:0006298;4.66e-66;1!UBERON:0006601;2.72e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;7.35e-18;4!DOID:1612;7.35e-18;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,7.35e-18,4;DOID:1612,7.35e-18,4 | |||
|ontology_enrichment_uberon=UBERON:0001829!2.45e-26!2;UBERON:0000341!1.27e-25!2;UBERON:0003127!1.85e-25!2;UBERON:0001044!1.04e-19!6;UBERON:0003293!1.04e-19!6;UBERON:0003294!1.04e-19!6;UBERON:0010047!1.04e-19!6;UBERON:0000167!1.04e-19!6;UBERON:0001736!3.98e-14!1;UBERON:0006298!3.98e-14!1;UBERON:0001831!5.15e-14!1;UBERON:0001567!5.15e-14!1;UBERON:0008801!5.15e-14!1;UBERON:0003408!4.47e-12!10;UBERON:0003126!5.87e-08!7;UBERON:0001005!5.87e-08!7;UBERON:0001004!6.32e-08!72;UBERON:0007023!9.19e-08!115;UBERON:0004089!1.20e-07!2;UBERON:0002530!2.25e-07!59;UBERON:0000078!6.15e-07!18;UBERON:0002365!7.93e-07!31;UBERON:0002330!7.93e-07!31 | |||
|ontology_enrichment_uberon_v019=UBERON:0001736;4.66e-66;1!UBERON:0001044;1.52e-44;6!UBERON:0003293;1.52e-44;6!UBERON:0003294;1.52e-44;6!UBERON:0010047;1.52e-44;6!UBERON:0003408;1.52e-44;6!UBERON:0000167;1.52e-44;6!UBERON:0001829;7.05e-34;2!UBERON:0001041;7.13e-20;14!UBERON:0002365;1.08e-19;31!UBERON:0002330;1.08e-19;31!UBERON:0001911;7.35e-18;4!UBERON:0000161;5.66e-15;19!UBERON:0000166;5.66e-15;19!UBERON:0000165;1.54e-10;28!UBERON:0000310;5.73e-08;10!UBERON:0004921;5.80e-08;33!UBERON:0002530;9.30e-08;57!UBERON:0001443;2.32e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001736,4.66e-66,1;UBERON:0006298,4.66e-66,1;UBERON:0001044,1.52e-44,6;UBERON:0003293,1.52e-44,6;UBERON:0003294,1.52e-44,6;UBERON:0010047,1.52e-44,6;UBERON:0000167,1.52e-44,6;UBERON:0001829,7.05e-34,2;UBERON:0003408,2.72e-27,10;UBERON:0002365,3.79e-20,31;UBERON:0002330,3.79e-20,31;UBERON:0001911,7.35e-18,4;UBERON:0005333,7.35e-18,4;UBERON:0008425,7.35e-18,4;UBERON:0005311,7.35e-18,4;UBERON:0000166,4.26e-13,22;UBERON:0002530,3.99e-11,59;UBERON:0000165,3.24e-10,29;UBERON:0000930,3.24e-10,29;UBERON:0000076,1.24e-09,8;UBERON:0000161,1.92e-08,36;UBERON:0000310,5.73e-08,10;UBERON:0001443,2.32e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19807999981739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427149650270779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.548257766857182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15113679410139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0.23806443146374,0,0,0,0,0.202117188958219,0,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:180022690..180022710,- | |||
}} |
Revision as of 15:15, 13 September 2013
Short description: | p@chr5:180022690..180022710, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:180022690..180022710, - |
Coexpression cluster: | C108_breast_hepatoblastoma_MCF7_parotid_salivary_submaxillary_prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mammary gland epithelial cell | 7.35e-18 | 4 |
Ontology term | p-value | n |
---|---|---|
submandibular gland | 4.66e-66 | 1 |
submandibular gland primordium | 4.66e-66 | 1 |
saliva-secreting gland | 1.52e-44 | 6 |
gland of oral region | 1.52e-44 | 6 |
gland of foregut | 1.52e-44 | 6 |
oral gland | 1.52e-44 | 6 |
oral cavity | 1.52e-44 | 6 |
major salivary gland | 7.05e-34 | 2 |
gland of gut | 2.72e-27 | 10 |
exocrine gland | 3.79e-20 | 31 |
exocrine system | 3.79e-20 | 31 |
mammary gland | 7.35e-18 | 4 |
mammary bud | 7.35e-18 | 4 |
mammary ridge | 7.35e-18 | 4 |
mammary placode | 7.35e-18 | 4 |
oral opening | 4.26e-13 | 22 |
gland | 3.99e-11 | 59 |
mouth | 3.24e-10 | 29 |
stomodeum | 3.24e-10 | 29 |
external ectoderm | 1.24e-09 | 8 |
orifice | 1.92e-08 | 36 |
breast | 5.73e-08 | 10 |
chest | 2.32e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 7.35e-18 | 4 |
breast cancer | 7.35e-18 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.