FFCP PHASE1:Mm9::chr17:74737941..74737954,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:74737941..74737954,-|id=chr17:74737941..74737954,-|ontology_enrichment_celltype=CL:0000540!5.39e-10!33;CL:0000047!5.39e-10!33;CL:0000031!5.39e-10!33;CL:0000404!5.39e-10!33;CL:0000221!8.12e-10!44;CL:0000133!8.12e-10!44;CL:0002319!9.17e-10!43;CL:0000117!1.13e-09!23;CL:0000337!1.13e-09!23;CL:0000393!3.15e-09!39;CL:0000211!3.15e-09!39;CL:0000055!8.14e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,7.31e-20,23;CL:0000337,7.31e-20,23;CL:0000540,1.11e-13,33;CL:0000047,1.11e-13,33;CL:0000031,1.11e-13,33;CL:0000404,1.11e-13,33;CL:0002319,3.25e-13,43;CL:0000221,6.74e-13,44;CL:0000133,6.74e-13,44;CL:0002609,1.57e-11,6;CL:0000393,1.75e-11,39;CL:0000211,1.75e-11,39;CL:0002613,6.48e-11,3;CL:0000120,8.12e-11,3;CL:0002679,1.47e-08,1;CL:0002321,8.30e-08,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!8.48e-13!73;UBERON:0005743!8.48e-13!73;UBERON:0000073!2.15e-12!75;UBERON:0001016!2.15e-12!75;UBERON:0004121!2.32e-12!102;UBERON:0000924!2.32e-12!102;UBERON:0006601!2.32e-12!102;UBERON:0003056!3.97e-11!49;UBERON:0002346!8.86e-10!71;UBERON:0003075!8.86e-10!71;UBERON:0007284!8.86e-10!71;UBERON:0000033!1.66e-09!63;UBERON:0003080!6.52e-09!40;UBERON:0002780!7.53e-09!39;UBERON:0001890!7.53e-09!39;UBERON:0006240!7.53e-09!39;UBERON:0000955!7.32e-08!50;UBERON:0006238!7.32e-08!50;UBERON:0001049!8.56e-08!52;UBERON:0005068!8.56e-08!52;UBERON:0006241!8.56e-08!52;UBERON:0007135!8.56e-08!52;UBERON:0002616!1.44e-07!49|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.32e-10,34;UBERON:0001017,3.15e-09,73;UBERON:0001016,5.88e-09,75;UBERON:0003528,7.83e-09,29;UBERON:0002791,7.83e-09,29;UBERON:0001893,7.83e-09,29;UBERON:0000369,6.78e-07,5;UBERON:0002435,6.78e-07,5;UBERON:0000204,6.78e-07,5;UBERON:0010082,6.78e-07,5;UBERON:0004121,7.31e-07,95;UBERON:0000924,7.31e-07,95;UBERON:0006601,7.31e-07,95|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.183546752161682,0,0,0,0.194429899074283,0.139986421625363,2.87505128729943,0,0,0.336093799142464,0,0,0,0.606949382578793,1.5869729378161,1.26766280701236,0,0,0,0,0,0.599200221036809,0.768436610643109,1.14058573539325,1.75507719831198,0.210324961351382,0.571301968807607,0,0.489963196859816,1.15014565221884,0.919218786610021,0,0.255374676170375,0.307213066512487,1.31886287730194,1.37231465403614,0.52091337055676,0.837548997004143,0,0.61119299110724,0,0.711858403995515,1.3047961207771,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0,0,0,0.304465478312141,0.461230994512117,0,0.587943535678524,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0.376963056338593,0.173824320192276,0.255715457330331,0.20778804455956,0,0.407357455401265,0,0,0,0.520481771850815,0.689706313300419,0.540186389416048,0.60281927134286,0.408218994907967,0.640568601424249,0.187403449119458,0,0.215567992932842,1.32374256117473,0.527853372491847,0.657587197282725,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0.210289948564127,1.13195073617213,0,0,1.2797295032114,0.696710015581316,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0.456994050438915,0,0.203651327845314,0.581857461502877,0.140271639780637,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0,0,0,0,0.54390568381871,0,0,0,0.117211686592203,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0.809621403349789,0.292255857911312,0.395287777946524,0.321321316421807,0.283880170416537,0.35613120733451,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.720244376125241,0.388076051348264,0.428674070063185,0.354680467284547,0.713475270408282,0.329098041204242,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0,0.324016022465404,0.209088296014469,0,0.269728692769641,0,0,0,0,0.56369293868419,0.299033092087958,0.496375471371293,0,0.258319646955462,0.337912250981556,0,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0.302899349844443,0,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0.221985953374065,0,0,0,0,0,0.428736758158132,0.501572104035363,0,0.920650473014354,0.572895513439397,0,0,0,0,0.45032120322422,0,0.51776031175182,0.62272408550506,0.399024873401031,0.170733605754134,0.729320151204882,0,0.367687016900028,0,0.206035057238894,0.64183841918363,0,0,0.377252682772152,0.187283014939765,0.128050304809739,0.34461281373368,0.476293691283074,0.115884325944855,0,0.4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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:74737941..74737954,- | |||
|id=chr17:74737941..74737954,- | |||
|ontology_enrichment_celltype=CL:0000540!5.39e-10!33;CL:0000047!5.39e-10!33;CL:0000031!5.39e-10!33;CL:0000404!5.39e-10!33;CL:0000221!8.12e-10!44;CL:0000133!8.12e-10!44;CL:0002319!9.17e-10!43;CL:0000117!1.13e-09!23;CL:0000337!1.13e-09!23;CL:0000393!3.15e-09!39;CL:0000211!3.15e-09!39;CL:0000055!8.14e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.31e-20,23;CL:0000337,7.31e-20,23;CL:0000540,1.11e-13,33;CL:0000047,1.11e-13,33;CL:0000031,1.11e-13,33;CL:0000404,1.11e-13,33;CL:0002319,3.25e-13,43;CL:0000221,6.74e-13,44;CL:0000133,6.74e-13,44;CL:0002609,1.57e-11,6;CL:0000393,1.75e-11,39;CL:0000211,1.75e-11,39;CL:0002613,6.48e-11,3;CL:0000120,8.12e-11,3;CL:0002679,1.47e-08,1;CL:0002321,8.30e-08,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.48e-13!73;UBERON:0005743!8.48e-13!73;UBERON:0000073!2.15e-12!75;UBERON:0001016!2.15e-12!75;UBERON:0004121!2.32e-12!102;UBERON:0000924!2.32e-12!102;UBERON:0006601!2.32e-12!102;UBERON:0003056!3.97e-11!49;UBERON:0002346!8.86e-10!71;UBERON:0003075!8.86e-10!71;UBERON:0007284!8.86e-10!71;UBERON:0000033!1.66e-09!63;UBERON:0003080!6.52e-09!40;UBERON:0002780!7.53e-09!39;UBERON:0001890!7.53e-09!39;UBERON:0006240!7.53e-09!39;UBERON:0000955!7.32e-08!50;UBERON:0006238!7.32e-08!50;UBERON:0001049!8.56e-08!52;UBERON:0005068!8.56e-08!52;UBERON:0006241!8.56e-08!52;UBERON:0007135!8.56e-08!52;UBERON:0002616!1.44e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.32e-10,34;UBERON:0001017,3.15e-09,73;UBERON:0001016,5.88e-09,75;UBERON:0003528,7.83e-09,29;UBERON:0002791,7.83e-09,29;UBERON:0001893,7.83e-09,29;UBERON:0000369,6.78e-07,5;UBERON:0002435,6.78e-07,5;UBERON:0000204,6.78e-07,5;UBERON:0010082,6.78e-07,5;UBERON:0004121,7.31e-07,95;UBERON:0000924,7.31e-07,95;UBERON:0006601,7.31e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.171217968225505,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0,0,0,0,0,0,0.377690453926732,0.405507724878058,0.183546752161682,0,0,0,0.194429899074283,0.139986421625363,2.87505128729943,0,0,0.336093799142464,0,0,0,0.606949382578793,1.5869729378161,1.26766280701236,0,0,0,0,0,0.599200221036809,0.768436610643109,1.14058573539325,1.75507719831198,0.210324961351382,0.571301968807607,0,0.489963196859816,1.15014565221884,0.919218786610021,0,0.255374676170375,0.307213066512487,1.31886287730194,1.37231465403614,0.52091337055676,0.837548997004143,0,0.61119299110724,0,0.711858403995515,1.3047961207771,0,0.0755715601067855,0.289864488701678,0,0,0,0,0,0,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0.253359865475099,0,0,0,0,0,0.304465478312141,0.461230994512117,0,0.587943535678524,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0.376963056338593,0.173824320192276,0.255715457330331,0.20778804455956,0,0.407357455401265,0,0,0,0.520481771850815,0.689706313300419,0.540186389416048,0.60281927134286,0.408218994907967,0.640568601424249,0.187403449119458,0,0.215567992932842,1.32374256117473,0.527853372491847,0.657587197282725,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0.146199987425332,0,0,0.210289948564127,1.13195073617213,0,0,1.2797295032114,0.696710015581316,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0.189667900953082,0.456994050438915,0,0.203651327845314,0.581857461502877,0.140271639780637,0.126473074248515,0,0,0,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0,0,0,0,0.54390568381871,0,0,0,0.117211686592203,0,0,0,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0.809621403349789,0.292255857911312,0.395287777946524,0.321321316421807,0.283880170416537,0.35613120733451,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0.363533729477506,0.356497378384721,0,0,0,0.340439605753788,0.720244376125241,0.388076051348264,0.428674070063185,0.354680467284547,0.713475270408282,0.329098041204242,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0.164140899745061,0,0,0,0,0,0,0,0,0,0,0,0,0.632671987162271,0,0.324016022465404,0.209088296014469,0,0.269728692769641,0,0,0,0,0.56369293868419,0.299033092087958,0.496375471371293,0,0.258319646955462,0.337912250981556,0,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0,0,0,0.302899349844443,0,0.100826185136841,0.0974578807397524,0,0,0.226730383615211,0.221985953374065,0,0,0,0,0,0.428736758158132,0.501572104035363,0,0.920650473014354,0.572895513439397,0,0,0,0,0.45032120322422,0,0.51776031175182,0.62272408550506,0.399024873401031,0.170733605754134,0.729320151204882,0,0.367687016900028,0,0.206035057238894,0.64183841918363,0,0,0.377252682772152,0.187283014939765,0.128050304809739,0.34461281373368,0.476293691283074,0.115884325944855,0,0.412085900803307,0.147198920134397,0.342869252385415,0,0.476872379894642,0.290692833264657,0.470546902076653,0,0.365855945745545,0.263069711437843,0.271608227691724,0.561142271657738,0.118635018124174,0.197008964751127,0.409231043169689,0,0.192906610981141,0.749431733813838,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr17:74737941..74737954,- | |||
}} |
Revision as of 15:18, 13 September 2013
Short description: | p@chr17:74737941..74737954, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:74737941..74737954, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.31e-20 | 23 |
neuroblast (sensu Vertebrata) | 7.31e-20 | 23 |
neuron | 1.11e-13 | 33 |
neuronal stem cell | 1.11e-13 | 33 |
neuroblast | 1.11e-13 | 33 |
electrically signaling cell | 1.11e-13 | 33 |
neural cell | 3.25e-13 | 43 |
ectodermal cell | 6.74e-13 | 44 |
neurectodermal cell | 6.74e-13 | 44 |
neuron of cerebral cortex | 1.57e-11 | 6 |
electrically responsive cell | 1.75e-11 | 39 |
electrically active cell | 1.75e-11 | 39 |
striatum neuron | 6.48e-11 | 3 |
granule cell | 8.12e-11 | 3 |
natural helper lymphocyte | 1.47e-08 | 1 |
embryonic cell | 8.30e-08 | 70 |
Ontology term | p-value | n |
---|---|---|
gray matter | 4.32e-10 | 34 |
central nervous system | 3.15e-09 | 73 |
nervous system | 5.88e-09 | 75 |
brain grey matter | 7.83e-09 | 29 |
regional part of telencephalon | 7.83e-09 | 29 |
telencephalon | 7.83e-09 | 29 |
corpus striatum | 6.78e-07 | 5 |
striatum | 6.78e-07 | 5 |
ventral part of telencephalon | 6.78e-07 | 5 |
future corpus striatum | 6.78e-07 | 5 |
ectoderm-derived structure | 7.31e-07 | 95 |
ectoderm | 7.31e-07 | 95 |
presumptive ectoderm | 7.31e-07 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.