FFCP PHASE1:Hg19::chr5:77655924..77655948,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9522|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=10563|TSSclassifier=S|UniProt=O15126|association_with_transcript=-390bp_to_ENST00000538629,NM_004866,uc003kfl.2,uc010jaa.2,uc011ctc.1,uc011ctd.1_5end|coexpression_cluster_id=C53|description=CAGE_peak_7_at_SCAMP1_5end|id=chr5:77655924..77655948,+|ontology_enrichment_celltype=CL:0000066!8.64e-17!254|ontology_enrichment_celltype_v019=CL:0002097;1.05e-08;2|ontology_enrichment_celltype_v019_2=CL:0000066,2.34e-08,253;CL:0002097,2.88e-08,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!3.90e-26!239;DOID:162!1.36e-25!235;DOID:305!1.26e-22!106;DOID:0050687!2.93e-22!143;DOID:0050686!8.08e-07!137|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=DOID:305,6.28e-09,106;DOID:0050687,5.08e-08,143;DOID:162,3.79e-07,235;DOID:14566,7.21e-07,239|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,1.46379839637152,0.246242116153576,0,0,0,0.273748850145768,0,0.382067028739756,0.492603536699674,0.236132343941038,0,0,0,0,0,0,0.774672005803016,0.142169232487422,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0,0,0,0.485168122375632,0.929716147622738,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0.272906150057846,0.674170453335254,0.306083892370903,0,0.639337125799041,0,0.398927315243264,0,0.870627715885752,1.13477044938228,0.622822248995575,0.502497330513487,0,0.217188844705117,0,1.10483290796269,0,0,0,0,0,0,0,0,0.19891667719909,0,1.75996244461323,0,0,0.426730222566507,0,0.574752439954483,0,0,0.569212969109448,0,0.382273228125229,0,0.560508562981536,0,0.590129310341499,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0.267540828089713,0,0.113309342697566,0,0.68725489096526,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0,0,0,0,0.361439152384566,0,0.144846518960824,0.795285947051099,0,0.0945348171640679,0.443458794925128,0.43917392846563,0.130979075497713,0,0,0,0,0,0.476981248610684,0,0.74291500265913,0,0,0,0,0,0,0.208994966536811,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.529636723252875,0.286836620748814,0.354668382198357,0.560677600142307,0,0.24666754841716,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.149448680551801,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0.257640540045629,0,0,0.0974370051611986,0,0,0,0,0,0,1.35282597214308,1.63647672354501,0.286804595389004,0.487894824518382,0.927708378250397,1.16193942869518,0.518305275076852,1.7662459561294,1.45990943630332,0,0,0,0,0,0.946454400318751,1.01150814046861,0.964044119533928,0.441175890929576,0.871517776369625,0.474541238222193,0.404493924480493,0.392442930250692,0.769494313892781,0,0,0,0,0,0,0,0.441463099414651,0.368965315629341,0,0.439001141634502,0,0.502644862058154,0.277765335475589,0,0,0,0,0.117408694235822,0,0,0.190254152234598,1.58040879591855,0,0,0,0,1.87467667973554,2.35174979478403,0.992425680696705,0.895585227028483,0.581267877027924,0.383382679165211,0,0,0,0,0,0,0.381988425558278,0,1.71072446022705,0,0,0,0.336393253036082,0,0.07333828582095,0.387815147273333,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.799783929456456,1.2162378064119,0,0,0,0,0,0.144781306667579,0.205476322550383,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0.414415513436035,0.24538298343828,0.500170521059677,0.542530047399471,0,0.356857977594324,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0.106727557803444,0,0,0,0.248107807818777,0.153461973288062,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0.519254429183621,0,0.362578348774867,1.00253235151642,0.644566922551274,0.114814448164607,0.182091168006717,0,0.451199612907412,0.385076685522074,0.784349769176855,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0.650756789328606,0.103041011647722,0.0915694648183434,0.082509499920588,1.14853107599234,0,0,0.096670718292122,0,0,0,0,0,0,0.0890320356467374,0.330569830721956,0.576570202095319,0.765676274967505,0.910420027699949,0,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0.48763373908959,0.487426979262569,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0,0,0.0982490410131212,0,0,0,0,0.379473173765715,0,0.288666338176536,1.34060455107157,1.08890984861323,0.188287601553558,0.43050537267123,0,0,0.229723400206959,0.507447609232169,0,0,0,0,0,0,0,0.427296284509893,0.962479855263359,0.980160863924127,0.185803175125719,0,0,0.637705090915289,0.199579371432817,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0.33307196799782,0,0.18714054040822,0.293016358543788,0.36408156524854,0.222886768554957,0.284136146806413,0.47748896947538,0,0,0,0,0.222617410045812,0.824019371133798,0.844501632511974,0,0,0.503865495708552,0.20453736500431,0.369254416383208,0,0.539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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9522 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=10563 | |||
|TSSclassifier=S | |||
|UniProt=O15126 | |||
|association_with_transcript=-390bp_to_ENST00000538629,NM_004866,uc003kfl.2,uc010jaa.2,uc011ctc.1,uc011ctd.1_5end | |||
|coexpression_cluster_id=C53 | |||
|description=CAGE_peak_7_at_SCAMP1_5end | |||
|id=chr5:77655924..77655948,+ | |||
|ontology_enrichment_celltype=CL:0000066!8.64e-17!254 | |||
|ontology_enrichment_celltype_v019=CL:0002097;1.05e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.34e-08,253;CL:0002097,2.88e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!3.90e-26!239;DOID:162!1.36e-25!235;DOID:305!1.26e-22!106;DOID:0050687!2.93e-22!143;DOID:0050686!8.08e-07!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,6.28e-09,106;DOID:0050687,5.08e-08,143;DOID:162,3.79e-07,235;DOID:14566,7.21e-07,239 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p7@SCAMP1 | |||
}} |
Revision as of 16:31, 13 September 2013
Short description: | p7@SCAMP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SCAMP1_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | -390bp_to_ENST00000538629, NM_004866, uc003kfl.2, uc010jaa.2, uc011ctc.1, uc011ctd.1_5end |
EntrezGene: | SCAMP1 |
HGNC: | 10563 |
UniProt: | O15126 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.34e-08 | 253 |
cortical cell of adrenal gland | 2.88e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 6.28e-09 | 106 |
cell type cancer | 5.08e-08 | 143 |
cancer | 3.79e-07 | 235 |
disease of cellular proliferation | 7.21e-07 | 239 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.