FFCP PHASE1:Mm9::chr18:76401789..76401814,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17126|HGNC=|UniProt=E9PZV6|association_with_transcript=-13bp_to_ENSMUST00000172198_5end|description=CAGE_peak_4_at_Smad2_5end|id=chr18:76401789..76401814,+|ontology_enrichment_celltype=CL:0000107!9.49e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,3.35e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!2.89e-07!11;UBERON:0002410!9.49e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000010,9.23e-08,11;UBERON:0002410,3.35e-07,9|phase1_expression=1.76163731815273,0.697950815278722,0.909998478779072,0.60492842261366,1.00179145989269,0.503637815735669,0.700837921786577,4.77756296733832,4.08287294239834,6.08567768437183,0.68487187290202,2.47293692885543,1.88320802924326,2.18551006047494,0.333109761815663,1.01237633694913,0,2.20823515750766,1.64537320326887,1.27316895539409,0.765389611359628,1.58865521921416,1.82839852397255,0.799962113967033,1.14704640533585,1.14846392823004,2.15380998079537,0.861884930743556,0.570070258369122,1.51218077855958,0.443461021310609,1.27006134691926,0,0,0,0.831173226792462,0.408338712524738,1.67412652294763,3.1253413780952,2.61761871986899,2.94115744015507,2.73218193983378,1.94204141212461,0.629484089877886,0.608261587317087,1.10128051297009,0,0.218025156380447,0.219686182734472,1.1665793944457,0.419959264876088,0,2.18117387875057,1.45072428402269,1.34437519656986,0.257259436035947,0.573066879877513,3.09403255366465,2.42779753031517,0.528990979272033,1.26766280701236,0.338844532069132,0,0.899899717281399,1.97773272513395,0,0,0.384218305321555,2.07379224616955,2.29510095163874,1.47227472945967,0.856952953211411,0.883474163806454,2.20483438586917,2.39613677545591,2.75765635983006,0,0.255374676170375,0.768032666281217,1.58263545276233,3.20206752608434,1.56274011167028,0.279182999001381,0,0.15279824777681,0.589257170947335,0.569486723196412,1.4911955666024,2.12033341332915,2.19157524309678,1.44932244350839,0.860423876981386,0,0,0,0.448026887097336,0.702222100658759,0.681721290312231,0.519572009205738,0,1.26759077799012,0,2.54805239706646,0,1.29894624606728,0.506719730950197,2.02209778005913,0.5709193985953,2.58937883647172,1.48442139064825,2.4287945747259,1.82679286987285,1.84492397804847,1.65794904607885,1.17588707135705,1.38233250462643,1.48316980640624,0.722996784599558,1.76922110389975,0.970601099684455,0.220841518460394,0,0,0.292780797011547,0,0.510914110417183,3.95389910869537,2.99951365496704,1.65191295194984,0.898743836428936,0,2.01046963380583,0.347648640384553,0.511430914660661,0.20778804455956,0.324482526135515,1.62942982160506,0.870848794270651,1.0108910337347,0.841767423545896,2.08192708740326,3.21862946206862,1.98068342785884,1.50704817835715,1.7009124787832,2.43416068541215,1.59292931751539,0.258703370739016,2.37124792226126,3.40390944302075,2.28736461413134,1.31517439456545,2.50242524303038,1.0447564995665,1.02891068203972,1.99034266818493,1.40442637462647,0.772043721344145,0.852490498186778,2.07125772535502,2.57978665979206,2.16074473753218,2.13070262026689,2.55793501271625,1.69693824176116,1.62773761325285,1.07309360559848,1.16765342367169,1.48103864922132,0.820837320395476,1.05389452409612,1.46199987425332,0.878200461164203,0.805238512562231,0.420579897128254,2.05809224758569,0,0.793351699990633,1.70630600428187,2.78684006232526,1.15980715189884,1.61346819698674,0.889512175379481,0.760902504450237,0.949058123089023,0.658795818896044,0.251335208800269,1.1937388322469,0.779856348476481,0,0.864552199498777,0.199141273254367,1.13800740571849,2.05647322697512,0,1.22190796707189,3.29719228184964,2.10407459670956,1.51767689098217,1.32849133181642,0.941992367048249,0.370191491765402,0.592905254174298,0.500535317148282,0.589676985339609,1.34917267430912,0.405720242777006,0.482354319504834,0,0,0,1.09824565275233,1.43768206527355,1.48856379067401,2.49630138491648,0.252578877947112,0.358794827043824,0,1.10851914099963,2.27389694124582,1.79261474086228,2.03694102930226,0.938760993154008,1.34005005953453,2.14239276797412,2.34160377429359,1.57635144106191,1.55025282754142,1.11618338060241,1.3109065177259,1.20879487306127,1.15719246865209,0,0.54390568381871,0,1.10374698521893,0.321101179975584,0.937693492737625,0.983609672260053,0.252470927204373,3.47059041357882,3.12350995437311,4.52389135238878,6.21318874676635,5.56996685205985,4.24614796183249,4.04810701674894,3.21481443702443,1.97643888973262,0.321321316421807,0.851640511249612,1.6025904330053,1.79175655288934,0.659880491890142,0,1.21390318077491,0.302323556964751,0.565815239267694,0.590603785761546,1.22974059177571,1.80899805217755,0.727067458955011,1.78248689192361,0.632073515871632,0,0,0.680879211507576,2.52085531643834,0.776152102696527,1.71469628025274,1.41872186913819,1.78368817602071,1.31639216481697,0,1.87737366450968,3.81297727554876,0.441056796109924,1.31909002353184,2.26050197374268,1.86970067277283,2.02932984805332,3.11867709515616,0.582961673259701,0.370850604021019,0.512612642393558,1.23832120777933,0.555583582109135,0.753473828018764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| ||
|EntrezGene=17126 | |||
|HGNC= | |||
|UniProt=E9PZV6 | |||
|association_with_transcript=-13bp_to_ENSMUST00000172198_5end | |||
|description=CAGE_peak_4_at_Smad2_5end | |||
|id=chr18:76401789..76401814,+ | |||
|ontology_enrichment_celltype=CL:0000107!9.49e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,3.35e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!2.89e-07!11;UBERON:0002410!9.49e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,9.23e-08,11;UBERON:0002410,3.35e-07,9 | |||
|phase1_expression=1.76163731815273,0.697950815278722,0.909998478779072,0.60492842261366,1.00179145989269,0.503637815735669,0.700837921786577,4.77756296733832,4.08287294239834,6.08567768437183,0.68487187290202,2.47293692885543,1.88320802924326,2.18551006047494,0.333109761815663,1.01237633694913,0,2.20823515750766,1.64537320326887,1.27316895539409,0.765389611359628,1.58865521921416,1.82839852397255,0.799962113967033,1.14704640533585,1.14846392823004,2.15380998079537,0.861884930743556,0.570070258369122,1.51218077855958,0.443461021310609,1.27006134691926,0,0,0,0.831173226792462,0.408338712524738,1.67412652294763,3.1253413780952,2.61761871986899,2.94115744015507,2.73218193983378,1.94204141212461,0.629484089877886,0.608261587317087,1.10128051297009,0,0.218025156380447,0.219686182734472,1.1665793944457,0.419959264876088,0,2.18117387875057,1.45072428402269,1.34437519656986,0.257259436035947,0.573066879877513,3.09403255366465,2.42779753031517,0.528990979272033,1.26766280701236,0.338844532069132,0,0.899899717281399,1.97773272513395,0,0,0.384218305321555,2.07379224616955,2.29510095163874,1.47227472945967,0.856952953211411,0.883474163806454,2.20483438586917,2.39613677545591,2.75765635983006,0,0.255374676170375,0.768032666281217,1.58263545276233,3.20206752608434,1.56274011167028,0.279182999001381,0,0.15279824777681,0.589257170947335,0.569486723196412,1.4911955666024,2.12033341332915,2.19157524309678,1.44932244350839,0.860423876981386,0,0,0,0.448026887097336,0.702222100658759,0.681721290312231,0.519572009205738,0,1.26759077799012,0,2.54805239706646,0,1.29894624606728,0.506719730950197,2.02209778005913,0.5709193985953,2.58937883647172,1.48442139064825,2.4287945747259,1.82679286987285,1.84492397804847,1.65794904607885,1.17588707135705,1.38233250462643,1.48316980640624,0.722996784599558,1.76922110389975,0.970601099684455,0.220841518460394,0,0,0.292780797011547,0,0.510914110417183,3.95389910869537,2.99951365496704,1.65191295194984,0.898743836428936,0,2.01046963380583,0.347648640384553,0.511430914660661,0.20778804455956,0.324482526135515,1.62942982160506,0.870848794270651,1.0108910337347,0.841767423545896,2.08192708740326,3.21862946206862,1.98068342785884,1.50704817835715,1.7009124787832,2.43416068541215,1.59292931751539,0.258703370739016,2.37124792226126,3.40390944302075,2.28736461413134,1.31517439456545,2.50242524303038,1.0447564995665,1.02891068203972,1.99034266818493,1.40442637462647,0.772043721344145,0.852490498186778,2.07125772535502,2.57978665979206,2.16074473753218,2.13070262026689,2.55793501271625,1.69693824176116,1.62773761325285,1.07309360559848,1.16765342367169,1.48103864922132,0.820837320395476,1.05389452409612,1.46199987425332,0.878200461164203,0.805238512562231,0.420579897128254,2.05809224758569,0,0.793351699990633,1.70630600428187,2.78684006232526,1.15980715189884,1.61346819698674,0.889512175379481,0.760902504450237,0.949058123089023,0.658795818896044,0.251335208800269,1.1937388322469,0.779856348476481,0,0.864552199498777,0.199141273254367,1.13800740571849,2.05647322697512,0,1.22190796707189,3.29719228184964,2.10407459670956,1.51767689098217,1.32849133181642,0.941992367048249,0.370191491765402,0.592905254174298,0.500535317148282,0.589676985339609,1.34917267430912,0.405720242777006,0.482354319504834,0,0,0,1.09824565275233,1.43768206527355,1.48856379067401,2.49630138491648,0.252578877947112,0.358794827043824,0,1.10851914099963,2.27389694124582,1.79261474086228,2.03694102930226,0.938760993154008,1.34005005953453,2.14239276797412,2.34160377429359,1.57635144106191,1.55025282754142,1.11618338060241,1.3109065177259,1.20879487306127,1.15719246865209,0,0.54390568381871,0,1.10374698521893,0.321101179975584,0.937693492737625,0.983609672260053,0.252470927204373,3.47059041357882,3.12350995437311,4.52389135238878,6.21318874676635,5.56996685205985,4.24614796183249,4.04810701674894,3.21481443702443,1.97643888973262,0.321321316421807,0.851640511249612,1.6025904330053,1.79175655288934,0.659880491890142,0,1.21390318077491,0.302323556964751,0.565815239267694,0.590603785761546,1.22974059177571,1.80899805217755,0.727067458955011,1.78248689192361,0.632073515871632,0,0,0.680879211507576,2.52085531643834,0.776152102696527,1.71469628025274,1.41872186913819,1.78368817602071,1.31639216481697,0,1.87737366450968,3.81297727554876,0.441056796109924,1.31909002353184,2.26050197374268,1.86970067277283,2.02932984805332,3.11867709515616,0.582961673259701,0.370850604021019,0.512612642393558,1.23832120777933,0.555583582109135,0.753473828018764,0.546776910884101,1.60144721244566,4.58941760983409,2.79902904647316,2.21119958087078,0,2.05618395827738,1.82987520414164,1.40406943068342,1.04544148007234,1.09181281873089,0.404593039154462,1.40510874733071,1.04702376793612,0.90730481304255,0.621339313086926,1.12738587736838,1.64468200648377,1.48912641411388,1.55560950675238,1.6790777052105,1.18269287843545,2.34714477291508,2.21347454234715,1.57289016638566,0.724752362478018,0.576060012515731,0.632022241256357,0.810900861160657,1.74608627180206,1.0393665838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| |||
|short_description=p4@Smad2 | |||
}} | |||
Revision as of 16:46, 13 September 2013
| Short description: | p4@Smad2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Smad2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -13bp_to_ENSMUST00000172198_5end |
| EntrezGene: | Smad2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| autonomic neuron | 3.35e-07 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| peripheral nervous system | 9.23e-08 | 11 |
| autonomic nervous system | 3.35e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
