FFCP PHASE1:Mm9::chr19:10055172..10055187,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=74|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:10055172..10055187,+|id=chr19:10055172..10055187,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,2.54e-07,6;CL:0000677,2.54e-07,6;CL:0000584,2.54e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!8.93e-13!43;UBERON:0001962!7.75e-11!2;UBERON:0001961!7.75e-11!2;UBERON:0001744!7.75e-11!2;UBERON:0005409!1.41e-10!59;UBERON:0000344!2.31e-08!15;UBERON:0002465!1.65e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.79e-20,31;UBERON:0005409,4.14e-13,47;UBERON:0000344,1.02e-10,15;UBERON:0001242,2.17e-07,13;UBERON:0001262,2.17e-07,13;UBERON:0004786,2.17e-07,13;UBERON:0004923,8.07e-07,24|phase1_expression=0,0,0,3.62957053568196,1.00179145989269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,0.45881856213434,0,0,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4947081960441,0.793351699990633,0,0,0,0,0,0,5.21981967698963,0.329397909448022,0,0,0,2.69645822596266,7.99710784536369,7.96565093017469,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:10055172..10055187,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=74 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:10055172..10055187,+ | |||
|id=chr19:10055172..10055187,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.54e-07,6;CL:0000677,2.54e-07,6;CL:0000584,2.54e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!8.93e-13!43;UBERON:0001962!7.75e-11!2;UBERON:0001961!7.75e-11!2;UBERON:0001744!7.75e-11!2;UBERON:0005409!1.41e-10!59;UBERON:0000344!2.31e-08!15;UBERON:0002465!1.65e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.79e-20,31;UBERON:0005409,4.14e-13,47;UBERON:0000344,1.02e-10,15;UBERON:0001242,2.17e-07,13;UBERON:0001262,2.17e-07,13;UBERON:0004786,2.17e-07,13;UBERON:0004923,8.07e-07,24 | |||
|phase1_expression=0,0,0,3.62957053568196,1.00179145989269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59992422793407,0.45881856213434,0,0,0.430942465371778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.4947081960441,0.793351699990633,0,0,0,0,0,0,5.21981967698963,0.329397909448022,0,0,0,2.69645822596266,7.99710784536369,7.96565093017469,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:10055172..10055187,+ | |||
}} |
Revision as of 16:56, 13 September 2013
Short description: | p@chr19:10055172..10055187, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:10055172..10055187, + |
Coexpression cluster: | MCL_coexpression_mm9:74 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.54e-07 | 6 |
gut absorptive cell | 2.54e-07 | 6 |
enterocyte | 2.54e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.79e-20 | 31 |
gastrointestinal system | 4.14e-13 | 47 |
mucosa | 1.02e-10 | 15 |
intestinal mucosa | 2.17e-07 | 13 |
wall of intestine | 2.17e-07 | 13 |
gastrointestinal system mucosa | 2.17e-07 | 13 |
organ component layer | 8.07e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.