FFCP PHASE1:Mm9::chr19:25107619..25107626,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=308|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:25107619..25107626,+|id=chr19:25107619..25107626,+|ontology_enrichment_celltype=CL:0000063!3.27e-19!66;CL:0000144!5.64e-18!121;CL:0000012!5.64e-18!121;CL:0002371!9.20e-17!118;CL:0000548!2.01e-15!115;CL:0000004!2.01e-15!115;CL:0000255!2.01e-15!115;CL:0000219!6.70e-13!54;CL:0002320!2.69e-11!46;CL:0000134!2.69e-11!46;CL:0000034!1.93e-10!97;CL:0000988!1.03e-09!32;CL:0002032!1.03e-09!32;CL:0000037!1.03e-09!32;CL:0000566!1.03e-09!32;CL:0000837!1.03e-09!32;CL:0002031!1.67e-08!25;CL:0000723!2.19e-08!91;CL:0000048!2.19e-08!91;CL:0000066!4.82e-08!25;CL:0000838!8.16e-07!12|ontology_enrichment_celltype_v019_2=CL:0002320,1.55e-22,46;CL:0000134,1.55e-22,46;CL:0000219,3.36e-22,54;CL:0000988,4.93e-21,32;CL:0002032,4.93e-21,32;CL:0000037,4.93e-21,32;CL:0000837,4.93e-21,32;CL:0002031,2.39e-17,25;CL:0000066,6.20e-17,25;CL:0000034,7.22e-16,97;CL:0000223,2.19e-12,20;CL:0000723,3.37e-12,91;CL:0000048,3.37e-12,91;CL:0000049,5.40e-12,19;CL:0002076,6.95e-12,15;CL:0000838,3.86e-11,12;CL:0000738,9.30e-11,17;CL:0002087,9.30e-11,17;CL:0000084,3.15e-10,11;CL:0000827,3.15e-10,11;CL:0000791,3.25e-10,9;CL:0000789,3.25e-10,9;CL:0002420,3.25e-10,9;CL:0002419,3.25e-10,9;CL:0000790,3.25e-10,9;CL:0000542,4.57e-10,13;CL:0000051,4.57e-10,13;CL:0000624,1.54e-09,8;CL:0002563,3.30e-09,9;CL:0002251,3.30e-09,9;CL:0000763,3.65e-09,16;CL:0000893,6.79e-08,6;CL:0002489,6.79e-08,6;CL:0000898,6.79e-08,6;CL:0000809,6.79e-08,6;CL:0000810,6.79e-08,6;CL:0000895,6.79e-08,6;CL:0000808,6.79e-08,6;CL:0000894,6.79e-08,6;CL:0000806,6.79e-08,6;CL:0000807,6.79e-08,6;CL:0000805,6.79e-08,6;CL:0002425,6.79e-08,6;CL:0002436,6.79e-08,6;CL:0002427,6.79e-08,6;CL:0002428,6.79e-08,6;CL:0002429,6.79e-08,6;CL:0002433,6.79e-08,6;CL:0002431,6.79e-08,6;CL:0002432,6.79e-08,6;CL:0000839,1.05e-07,13;CL:0000075,4.64e-07,7;CL:0000050,5.89e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!2.69e-11!46;UBERON:0000344!2.60e-07!15|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.55e-22,46;UBERON:0000344,1.52e-13,15;UBERON:0001242,3.71e-11,13;UBERON:0001262,3.71e-11,13;UBERON:0004786,3.71e-11,13;UBERON:0000485,6.60e-11,11;UBERON:0003350,3.30e-09,9;UBERON:0004808,3.30e-09,9;UBERON:0001277,3.30e-09,9;UBERON:0002371,4.00e-07,16;UBERON:0004923,4.23e-07,24|phase1_expression=4.16387002472464,2.44282785347553,2.27499619694768,3.93203474698879,2.00358291978539,2.51818907867835,4.43864017131499,5.03580961422147,3.94208422024667,4.21316147379588,9.07455231595176,6.22222840163624,6.67682846731702,5.33264454755884,0,6.47920855647443,8.39474253753776,5.0473946457318,4.9361196098066,5.94145512517242,0.17008658030214,0.198581902401771,10.1867917764185,9.5995453676044,7.34109699414944,4.59385571292016,5.59990595006797,3.44753972297422,9.88121781173144,4.28451220591882,4.21287970245079,4.44521471421742,0,15.8481681015439,4.04392267651784,5.98444723290572,4.49172583777212,0.837063261473815,3.906676722619,5.23523743973798,2.35292595212406,0.683045484958446,2.91306211818692,0,0.202753862439029,0,0.782391344348039,0.436050312760893,0.439372365468944,0,0.279972843250725,1.43752564364972,4.19456515144341,1.45072428402269,2.01656279485478,0,0.286533439938757,0.515672092277442,0.202316460859598,0.528990979272033,1.26766280701236,0.677689064138264,0.889294796111139,0,0,1.4209602298922,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0.571301968807607,0.441737081903227,0,0.383381884072945,0.919218786610021,0,0.255374676170375,0.46081959976873,0.131886287730194,0.182975287204819,0.52091337055676,0.558365998002762,0,0.15279824777681,0,0,0,6.89108359331975,8.76630097238712,6.37701875143691,14.6272059086836,0,1.07940638327563,0,1.34408066129201,0.702222100658759,0.681721290312231,15.3273742715693,20.8470348961101,2.95771181531029,7.69958864485907,0,0,10.3915699685383,11.9079136773296,9.60496445528088,0.45673551887624,0,0,0,0,0.230615497256059,0.753613202763113,0.117588707135705,0.376999773989026,0,0.433798070759735,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0,0.255457055208591,3.59445373517761,16.197373736822,3.43089613097275,0,0,0,0.173824320192276,0,0.20778804455956,0,0.101839363850316,0.373220911830279,0,0,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0,0,0,7.02213187313235,15.9555702411123,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.925602677324269,0.232533944750408,0.804820204198858,0.467061369468678,0.16455984991348,1.47750717671186,0.729619285912702,0.292399974850665,0.219550115291051,1.07365135008297,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0,0,1.1270773567308,0.203651327845314,0,0.210407459670956,0.0632365371242573,0.147610147979602,0.470996183524124,0.616985819609003,0.592905254174298,0.333690211432188,0,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0.538192240565737,0,0.369506380333209,0,0.325929952884052,0.169745085775188,0,0,0,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,18.0949540727127,14.6854534631052,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0.35613120733451,0,0,0,0.485561272309963,0,0,0,0,0,0,0,0,2.10837217149998,0,0.340439605753788,0.18006109403131,0.388076051348264,0,0,0,0.329098041204242,0.608929898229199,0,0.21183207086382,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0.119372344003136,0,0.582961673259701,0,0.170870880797853,0,0.185194527369712,0,0,0,1.01987057996313,1.25956307091292,2.07299960706636,0,0,0,0.216010681643603,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0.388844919875379,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0.410843828659309,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.302478555410522,0,0,0,0,2.66383144048878,3.85769583420746,5.70807695637867,0.386379188064381,0.187682475451182,0,0.214368379079066,0,0,0,0,14.2638141345261,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0.206035057238894,0,0.505394423527595,0.25347929989024,0.377252682772152,0.187283014939765,0,0.34461281373368,0,0,0,0.412085900803307,0.147198920134397,0,0,0.476872379894642,0.290692833264657,0.0941093804153306,0,0.548783918618318,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.309873682371932,0,0,0.701794825336225,0.214871054048298,0,0.441182838239031,0|short_description=p@chr19:25107619..25107626,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=308 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr19:25107619..25107626,+ | |||
|id=chr19:25107619..25107626,+ | |||
|ontology_enrichment_celltype=CL:0000063!3.27e-19!66;CL:0000144!5.64e-18!121;CL:0000012!5.64e-18!121;CL:0002371!9.20e-17!118;CL:0000548!2.01e-15!115;CL:0000004!2.01e-15!115;CL:0000255!2.01e-15!115;CL:0000219!6.70e-13!54;CL:0002320!2.69e-11!46;CL:0000134!2.69e-11!46;CL:0000034!1.93e-10!97;CL:0000988!1.03e-09!32;CL:0002032!1.03e-09!32;CL:0000037!1.03e-09!32;CL:0000566!1.03e-09!32;CL:0000837!1.03e-09!32;CL:0002031!1.67e-08!25;CL:0000723!2.19e-08!91;CL:0000048!2.19e-08!91;CL:0000066!4.82e-08!25;CL:0000838!8.16e-07!12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.55e-22,46;CL:0000134,1.55e-22,46;CL:0000219,3.36e-22,54;CL:0000988,4.93e-21,32;CL:0002032,4.93e-21,32;CL:0000037,4.93e-21,32;CL:0000837,4.93e-21,32;CL:0002031,2.39e-17,25;CL:0000066,6.20e-17,25;CL:0000034,7.22e-16,97;CL:0000223,2.19e-12,20;CL:0000723,3.37e-12,91;CL:0000048,3.37e-12,91;CL:0000049,5.40e-12,19;CL:0002076,6.95e-12,15;CL:0000838,3.86e-11,12;CL:0000738,9.30e-11,17;CL:0002087,9.30e-11,17;CL:0000084,3.15e-10,11;CL:0000827,3.15e-10,11;CL:0000791,3.25e-10,9;CL:0000789,3.25e-10,9;CL:0002420,3.25e-10,9;CL:0002419,3.25e-10,9;CL:0000790,3.25e-10,9;CL:0000542,4.57e-10,13;CL:0000051,4.57e-10,13;CL:0000624,1.54e-09,8;CL:0002563,3.30e-09,9;CL:0002251,3.30e-09,9;CL:0000763,3.65e-09,16;CL:0000893,6.79e-08,6;CL:0002489,6.79e-08,6;CL:0000898,6.79e-08,6;CL:0000809,6.79e-08,6;CL:0000810,6.79e-08,6;CL:0000895,6.79e-08,6;CL:0000808,6.79e-08,6;CL:0000894,6.79e-08,6;CL:0000806,6.79e-08,6;CL:0000807,6.79e-08,6;CL:0000805,6.79e-08,6;CL:0002425,6.79e-08,6;CL:0002436,6.79e-08,6;CL:0002427,6.79e-08,6;CL:0002428,6.79e-08,6;CL:0002429,6.79e-08,6;CL:0002433,6.79e-08,6;CL:0002431,6.79e-08,6;CL:0002432,6.79e-08,6;CL:0000839,1.05e-07,13;CL:0000075,4.64e-07,7;CL:0000050,5.89e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.69e-11!46;UBERON:0000344!2.60e-07!15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.55e-22,46;UBERON:0000344,1.52e-13,15;UBERON:0001242,3.71e-11,13;UBERON:0001262,3.71e-11,13;UBERON:0004786,3.71e-11,13;UBERON:0000485,6.60e-11,11;UBERON:0003350,3.30e-09,9;UBERON:0004808,3.30e-09,9;UBERON:0001277,3.30e-09,9;UBERON:0002371,4.00e-07,16;UBERON:0004923,4.23e-07,24 | |||
|phase1_expression=4.16387002472464,2.44282785347553,2.27499619694768,3.93203474698879,2.00358291978539,2.51818907867835,4.43864017131499,5.03580961422147,3.94208422024667,4.21316147379588,9.07455231595176,6.22222840163624,6.67682846731702,5.33264454755884,0,6.47920855647443,8.39474253753776,5.0473946457318,4.9361196098066,5.94145512517242,0.17008658030214,0.198581902401771,10.1867917764185,9.5995453676044,7.34109699414944,4.59385571292016,5.59990595006797,3.44753972297422,9.88121781173144,4.28451220591882,4.21287970245079,4.44521471421742,0,15.8481681015439,4.04392267651784,5.98444723290572,4.49172583777212,0.837063261473815,3.906676722619,5.23523743973798,2.35292595212406,0.683045484958446,2.91306211818692,0,0.202753862439029,0,0.782391344348039,0.436050312760893,0.439372365468944,0,0.279972843250725,1.43752564364972,4.19456515144341,1.45072428402269,2.01656279485478,0,0.286533439938757,0.515672092277442,0.202316460859598,0.528990979272033,1.26766280701236,0.677689064138264,0.889294796111139,0,0,1.4209602298922,0,0,0.207379224616955,0.135005938331691,0.210324961351382,0.571301968807607,0.441737081903227,0,0.383381884072945,0.919218786610021,0,0.255374676170375,0.46081959976873,0.131886287730194,0.182975287204819,0.52091337055676,0.558365998002762,0,0.15279824777681,0,0,0,6.89108359331975,8.76630097238712,6.37701875143691,14.6272059086836,0,1.07940638327563,0,1.34408066129201,0.702222100658759,0.681721290312231,15.3273742715693,20.8470348961101,2.95771181531029,7.69958864485907,0,0,10.3915699685383,11.9079136773296,9.60496445528088,0.45673551887624,0,0,0,0,0.230615497256059,0.753613202763113,0.117588707135705,0.376999773989026,0,0.433798070759735,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0.292780797011547,0,0.255457055208591,3.59445373517761,16.197373736822,3.43089613097275,0,0,0,0.173824320192276,0,0.20778804455956,0,0.101839363850316,0.373220911830279,0,0,0,0.229902104433473,0,0.150704817835715,0.136072998302656,0,0.0937017245597288,0,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0,0,0,7.02213187313235,15.9555702411123,0,0,0.234526059981096,0.180062061461015,0.23674473558521,0.393528463494808,0.925602677324269,0.232533944750408,0.804820204198858,0.467061369468678,0.16455984991348,1.47750717671186,0.729619285912702,0.292399974850665,0.219550115291051,1.07365135008297,0,0,0,0.264450566663544,0,0,0.128867461322093,0,0.22237804384487,0,0,0.329397909448022,0,0,0,0,0.216138049874694,0,0,0,1.1270773567308,0.203651327845314,0,0.210407459670956,0.0632365371242573,0.147610147979602,0.470996183524124,0.616985819609003,0.592905254174298,0.333690211432188,0,0,0,0.241177159752417,0,0.287696137450811,0,0,0,0,0,0,0.538192240565737,0,0.369506380333209,0,0.325929952884052,0.169745085775188,0,0,0,0.195133647857799,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,18.0949540727127,14.6854534631052,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0.35613120733451,0,0,0,0.485561272309963,0,0,0,0,0,0,0,0,2.10837217149998,0,0.340439605753788,0.18006109403131,0.388076051348264,0,0,0,0.329098041204242,0.608929898229199,0,0.21183207086382,0.220528398054962,0.16488625294148,0.161464426695906,0.120625849856312,0.119372344003136,0,0.582961673259701,0,0.170870880797853,0,0.185194527369712,0,0,0,1.01987057996313,1.25956307091292,2.07299960706636,0,0,0,0.216010681643603,0.209088296014469,0,0,0.0826534557253359,0.26175594198403,0.388844919875379,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0.241584120826006,0.288030006257865,0,0,0.410843828659309,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0,0.0762068066549998,0.302478555410522,0,0,0,0,2.66383144048878,3.85769583420746,5.70807695637867,0.386379188064381,0.187682475451182,0,0.214368379079066,0,0,0,0,14.2638141345261,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0.206035057238894,0,0.505394423527595,0.25347929989024,0.377252682772152,0.187283014939765,0,0.34461281373368,0,0,0,0.412085900803307,0.147198920134397,0,0,0.476872379894642,0.290692833264657,0.0941093804153306,0,0.548783918618318,0.263069711437843,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0.309873682371932,0,0,0.701794825336225,0.214871054048298,0,0.441182838239031,0 | |||
|short_description=p@chr19:25107619..25107626,+ | |||
}} |
Revision as of 17:15, 13 September 2013
Short description: | p@chr19:25107619..25107626, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:25107619..25107626, + |
Coexpression cluster: | MCL_coexpression_mm9:308 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.55e-22 | 46 |
mucosa | 1.52e-13 | 15 |
intestinal mucosa | 3.71e-11 | 13 |
wall of intestine | 3.71e-11 | 13 |
gastrointestinal system mucosa | 3.71e-11 | 13 |
simple columnar epithelium | 6.60e-11 | 11 |
epithelium of mucosa | 3.30e-09 | 9 |
gastrointestinal system epithelium | 3.30e-09 | 9 |
intestinal epithelium | 3.30e-09 | 9 |
bone marrow | 4.00e-07 | 16 |
organ component layer | 4.23e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.