FFCP PHASE1:Hg19::chr6:134210243..134210257,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6943|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11632|TSSclassifier=S|UniProt=O43680|association_with_transcript=-1bp_to_NM_198392,uc003qei.3,uc003qej.2_5end|description=CAGE_peak_1_at_TCF21_5end|id=chr6:134210243..134210257,+|ontology_enrichment_celltype=CL:0000055!1.64e-25!180;CL:0000183!3.14e-19!59;CL:0000187!3.91e-18!54;CL:0000680!8.65e-17!57;CL:0000056!8.65e-17!57;CL:0000355!8.65e-17!57;CL:0000192!1.99e-16!42;CL:0000514!1.99e-16!42;CL:0000393!2.25e-16!60;CL:0000211!2.25e-16!60;CL:0000057!2.58e-16!75;CL:0002494!1.53e-10!16;CL:0000359!9.77e-10!32;CL:0000222!5.82e-07!119|ontology_enrichment_celltype_v019=CL:0000192;2.54e-13;43!CL:0002494;1.71e-12;16!CL:0000187;1.20e-09;55!CL:0000359;1.21e-09;32!CL:0002539;1.81e-07;10!CL:0000393;2.79e-07;61!CL:0000211;2.79e-07;61!CL:0000057;4.48e-07;73|ontology_enrichment_celltype_v019_2=CL:0000192,1.42e-18,43;CL:0000514,1.42e-18,43;CL:0000187,1.01e-16,55;CL:0000680,4.16e-15,58;CL:0000056,4.16e-15,58;CL:0000355,4.16e-15,58;CL:0000057,1.83e-14,76;CL:0000393,1.13e-13,61;CL:0000211,1.13e-13,61;CL:0002494,1.77e-12,16;CL:0000359,7.06e-10,32;CL:0002539,1.85e-07,10;CL:0000222,7.57e-07,121|ontology_enrichment_development_v019=CL:0000514;2.54e-13;43!CL:0000355;7.83e-08;58|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005256!1.41e-21!143;UBERON:0000481!3.56e-21!347;UBERON:0002385!5.89e-18!63;UBERON:0001015!5.89e-18!63;UBERON:0000383!5.89e-18!63;UBERON:0003103!1.36e-17!69;UBERON:0002100!3.19e-17!216;UBERON:0001134!8.26e-17!61;UBERON:0002036!8.26e-17!61;UBERON:0003082!8.26e-17!61;UBERON:0007100!1.10e-16!27;UBERON:0000914!1.93e-16!83;UBERON:0002329!1.93e-16!83;UBERON:0003077!1.93e-16!83;UBERON:0003059!1.93e-16!83;UBERON:0007282!1.93e-16!83;UBERON:0009618!1.93e-16!83;UBERON:0007285!1.93e-16!83;UBERON:0003914!3.11e-16!118;UBERON:0004290!6.20e-16!70;UBERON:0000475!6.75e-16!365;UBERON:0000948!3.34e-15!24;UBERON:0005498!3.34e-15!24;UBERON:0004140!3.34e-15!24;UBERON:0009881!3.34e-15!24;UBERON:0004141!3.34e-15!24;UBERON:0003084!3.34e-15!24;UBERON:0007005!3.34e-15!24;UBERON:0004139!3.34e-15!24;UBERON:0004291!3.34e-15!24;UBERON:0004872!1.44e-14!84;UBERON:0003104!1.99e-14!238;UBERON:0009142!1.99e-14!238;UBERON:0000477!8.15e-13!286;UBERON:0000468!1.58e-12!659;UBERON:0000119!1.65e-11!312;UBERON:0000483!1.75e-11!309;UBERON:0001009!2.38e-11!113;UBERON:0000486!3.41e-11!82;UBERON:0004535!2.65e-10!110;UBERON:0004111!3.49e-10!241;UBERON:0001135!4.95e-10!15;UBERON:0003886!7.16e-10!63;UBERON:0000467!2.34e-09!625;UBERON:0000480!3.18e-09!626;UBERON:0002049!8.66e-09!79;UBERON:0007798!8.66e-09!79;UBERON:0000025!1.32e-08!194;UBERON:0000490!1.74e-08!138;UBERON:0002553!2.44e-08!70;UBERON:0000062!6.02e-08!511;UBERON:0004876!6.35e-08!20;UBERON:0002417!7.84e-08!61;UBERON:0000916!7.84e-08!61;UBERON:0003887!1.19e-07!21;UBERON:0003064!1.32e-07!37;UBERON:0000466!1.65e-07!126;UBERON:0001048!1.77e-07!168;UBERON:0000922!2.06e-07!612;UBERON:0000926!2.38e-07!448;UBERON:0004120!2.38e-07!448;UBERON:0006603!2.38e-07!448;UBERON:0000479!3.81e-07!787;UBERON:0000464!4.47e-07!104;UBERON:0000080!5.91e-07!18;UBERON:0002120!5.91e-07!18;UBERON:0004875!5.91e-07!18;UBERON:0005721!5.91e-07!18;UBERON:0005754!5.91e-07!18;UBERON:0007297!5.91e-07!18;UBERON:0002050!6.05e-07!605;UBERON:0005423!6.05e-07!605;UBERON:0007023!7.34e-07!115|ontology_enrichment_uberon_v019=UBERON:0007100;7.41e-19;25!UBERON:0000948;4.58e-17;22!UBERON:0001135;7.06e-12;15!UBERON:0003103;1.69e-08;61!UBERON:0004237;1.81e-07;10!UBERON:0004695;1.81e-07;10!UBERON:0002111;1.81e-07;10!UBERON:0004178;1.81e-07;10!UBERON:0003688;5.51e-07;6!UBERON:0002358;5.51e-07;6!UBERON:0003684;5.51e-07;6!UBERON:0001178;5.51e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0003104,3.69e-24,160;UBERON:0009142,3.69e-24,160;UBERON:0007100,5.94e-20,27;UBERON:0005256,2.71e-18,122;UBERON:0003914,3.15e-18,117;UBERON:0000948,3.79e-18,24;UBERON:0005498,3.79e-18,24;UBERON:0004140,3.79e-18,24;UBERON:0009881,3.79e-18,24;UBERON:0004141,3.79e-18,24;UBERON:0003084,3.79e-18,24;UBERON:0007005,3.79e-18,24;UBERON:0004139,3.79e-18,24;UBERON:0004291,3.79e-18,24;UBERON:0003103,4.40e-18,68;UBERON:0002100,3.06e-17,199;UBERON:0002385,5.38e-16,64;UBERON:0001015,5.38e-16,64;UBERON:0000383,5.38e-16,64;UBERON:0007503,6.73e-16,78;UBERON:0004872,1.03e-15,83;UBERON:0001134,9.66e-15,62;UBERON:0002036,9.66e-15,62;UBERON:0003082,9.66e-15,62;UBERON:0007524,4.45e-14,73;UBERON:0002329,5.75e-14,71;UBERON:0003059,5.75e-14,71;UBERON:0007282,5.75e-14,71;UBERON:0004290,5.75e-14,71;UBERON:0009618,5.75e-14,71;UBERON:0003077,1.46e-13,72;UBERON:0007285,1.46e-13,72;UBERON:0001009,1.11e-12,112;UBERON:0001135,7.35e-12,15;UBERON:0004535,1.94e-11,109;UBERON:0000483,2.41e-11,306;UBERON:0000119,6.45e-11,309;UBERON:0004111,2.12e-10,240;UBERON:0001048,6.74e-10,160;UBERON:0000926,6.92e-10,315;UBERON:0004120,6.92e-10,315;UBERON:0006603,6.92e-10,315;UBERON:0000486,7.50e-10,83;UBERON:0003886,3.20e-09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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=6943 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11632 | |||
|TSSclassifier=S | |||
|UniProt=O43680 | |||
|association_with_transcript=-1bp_to_NM_198392,uc003qei.3,uc003qej.2_5end | |||
|description=CAGE_peak_1_at_TCF21_5end | |||
|id=chr6:134210243..134210257,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.64e-25!180;CL:0000183!3.14e-19!59;CL:0000187!3.91e-18!54;CL:0000680!8.65e-17!57;CL:0000056!8.65e-17!57;CL:0000355!8.65e-17!57;CL:0000192!1.99e-16!42;CL:0000514!1.99e-16!42;CL:0000393!2.25e-16!60;CL:0000211!2.25e-16!60;CL:0000057!2.58e-16!75;CL:0002494!1.53e-10!16;CL:0000359!9.77e-10!32;CL:0000222!5.82e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000192;2.54e-13;43!CL:0002494;1.71e-12;16!CL:0000187;1.20e-09;55!CL:0000359;1.21e-09;32!CL:0002539;1.81e-07;10!CL:0000393;2.79e-07;61!CL:0000211;2.79e-07;61!CL:0000057;4.48e-07;73 | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.42e-18,43;CL:0000514,1.42e-18,43;CL:0000187,1.01e-16,55;CL:0000680,4.16e-15,58;CL:0000056,4.16e-15,58;CL:0000355,4.16e-15,58;CL:0000057,1.83e-14,76;CL:0000393,1.13e-13,61;CL:0000211,1.13e-13,61;CL:0002494,1.77e-12,16;CL:0000359,7.06e-10,32;CL:0002539,1.85e-07,10;CL:0000222,7.57e-07,121 | |||
|ontology_enrichment_development_v019=CL:0000514;2.54e-13;43!CL:0000355;7.83e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.41e-21!143;UBERON:0000481!3.56e-21!347;UBERON:0002385!5.89e-18!63;UBERON:0001015!5.89e-18!63;UBERON:0000383!5.89e-18!63;UBERON:0003103!1.36e-17!69;UBERON:0002100!3.19e-17!216;UBERON:0001134!8.26e-17!61;UBERON:0002036!8.26e-17!61;UBERON:0003082!8.26e-17!61;UBERON:0007100!1.10e-16!27;UBERON:0000914!1.93e-16!83;UBERON:0002329!1.93e-16!83;UBERON:0003077!1.93e-16!83;UBERON:0003059!1.93e-16!83;UBERON:0007282!1.93e-16!83;UBERON:0009618!1.93e-16!83;UBERON:0007285!1.93e-16!83;UBERON:0003914!3.11e-16!118;UBERON:0004290!6.20e-16!70;UBERON:0000475!6.75e-16!365;UBERON:0000948!3.34e-15!24;UBERON:0005498!3.34e-15!24;UBERON:0004140!3.34e-15!24;UBERON:0009881!3.34e-15!24;UBERON:0004141!3.34e-15!24;UBERON:0003084!3.34e-15!24;UBERON:0007005!3.34e-15!24;UBERON:0004139!3.34e-15!24;UBERON:0004291!3.34e-15!24;UBERON:0004872!1.44e-14!84;UBERON:0003104!1.99e-14!238;UBERON:0009142!1.99e-14!238;UBERON:0000477!8.15e-13!286;UBERON:0000468!1.58e-12!659;UBERON:0000119!1.65e-11!312;UBERON:0000483!1.75e-11!309;UBERON:0001009!2.38e-11!113;UBERON:0000486!3.41e-11!82;UBERON:0004535!2.65e-10!110;UBERON:0004111!3.49e-10!241;UBERON:0001135!4.95e-10!15;UBERON:0003886!7.16e-10!63;UBERON:0000467!2.34e-09!625;UBERON:0000480!3.18e-09!626;UBERON:0002049!8.66e-09!79;UBERON:0007798!8.66e-09!79;UBERON:0000025!1.32e-08!194;UBERON:0000490!1.74e-08!138;UBERON:0002553!2.44e-08!70;UBERON:0000062!6.02e-08!511;UBERON:0004876!6.35e-08!20;UBERON:0002417!7.84e-08!61;UBERON:0000916!7.84e-08!61;UBERON:0003887!1.19e-07!21;UBERON:0003064!1.32e-07!37;UBERON:0000466!1.65e-07!126;UBERON:0001048!1.77e-07!168;UBERON:0000922!2.06e-07!612;UBERON:0000926!2.38e-07!448;UBERON:0004120!2.38e-07!448;UBERON:0006603!2.38e-07!448;UBERON:0000479!3.81e-07!787;UBERON:0000464!4.47e-07!104;UBERON:0000080!5.91e-07!18;UBERON:0002120!5.91e-07!18;UBERON:0004875!5.91e-07!18;UBERON:0005721!5.91e-07!18;UBERON:0005754!5.91e-07!18;UBERON:0007297!5.91e-07!18;UBERON:0002050!6.05e-07!605;UBERON:0005423!6.05e-07!605;UBERON:0007023!7.34e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;7.41e-19;25!UBERON:0000948;4.58e-17;22!UBERON:0001135;7.06e-12;15!UBERON:0003103;1.69e-08;61!UBERON:0004237;1.81e-07;10!UBERON:0004695;1.81e-07;10!UBERON:0002111;1.81e-07;10!UBERON:0004178;1.81e-07;10!UBERON:0003688;5.51e-07;6!UBERON:0002358;5.51e-07;6!UBERON:0003684;5.51e-07;6!UBERON:0001178;5.51e-07;6 | |||
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| |||
|short_description=p1@TCF21 | |||
}} |
Revision as of 18:04, 13 September 2013
Short description: | p1@TCF21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TCF21_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_NM_198392, uc003qei.3, uc003qej.2_5end |
EntrezGene: | TCF21 |
HGNC: | 11632 |
UniProt: | O43680 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.42e-18 | 43 |
smooth muscle myoblast | 1.42e-18 | 43 |
muscle cell | 1.01e-16 | 55 |
muscle precursor cell | 4.16e-15 | 58 |
myoblast | 4.16e-15 | 58 |
multi-potent skeletal muscle stem cell | 4.16e-15 | 58 |
fibroblast | 1.83e-14 | 76 |
electrically responsive cell | 1.13e-13 | 61 |
electrically active cell | 1.13e-13 | 61 |
cardiocyte | 1.77e-12 | 16 |
vascular associated smooth muscle cell | 7.06e-10 | 32 |
aortic smooth muscle cell | 1.85e-07 | 10 |
mesodermal cell | 7.57e-07 | 121 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.