FFCP PHASE1:Mm9::chr19:56622744..56622773,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=66866|HGNC=|UniProt=Q8BZW8,F6ZR71,B2RR26|association_with_transcript=0bp_to_ENSMUST00000071423,ENSMUST00000165411,NM_025811,uc008hzc.1_5end|description=CAGE_peak_5_at_Nhlrc2_5end|id=chr19:56622744..56622773,+|ontology_enrichment_celltype=CL:0000540!1.97e-08!33;CL:0000047!1.97e-08!33;CL:0000031!1.97e-08!33;CL:0000404!1.97e-08!33;CL:0000117!3.88e-07!23;CL:0000337!3.88e-07!23;CL:0000221!6.38e-07!44;CL:0000133!6.38e-07!44|ontology_enrichment_celltype_v019_2=CL:0000540,2.30e-08,33;CL:0000047,2.30e-08,33;CL:0000031,2.30e-08,33;CL:0000404,2.30e-08,33;CL:0000117,1.04e-07,23;CL:0000337,1.04e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!3.31e-08!94;UBERON:0002346!3.83e-07!71;UBERON:0003075!3.83e-07!71;UBERON:0007284!3.83e-07!71;UBERON:0007811!4.68e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.49e-07,43|phase1_expression=0.960893082628764,0,0,0,0,0,0.233612640595526,0.774739940649458,0.140788722151667,0,1.54096171402954,1.83475965689274,1.19840510951844,0.524522414513984,1.66554880907831,1.82227740650843,1.39912375625629,0.473193248037357,0.685572168028694,1.27316895539409,0.255129870453209,0.695036658406197,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,1.90509202037889,2.46025915033828,0,0,0,0,0,0,0,0,0,0.971020706062307,0.629484089877886,0.202753862439029,0.550640256485045,0.782391344348039,1.30815093828268,0.878744730937887,1.36100929351998,0.279972843250725,0,0.503347818173209,1.45072428402269,0.336093799142464,0.257259436035947,0.573066879877513,0,4.04632921719196,4.7609188134483,2.53532561402472,0.677689064138264,0,0,0,0,0.299600110518405,0.384218305321555,3.11068836925433,4.86021377994086,3.36519938162211,0.571301968807607,0.662605622854841,2.81728838194394,5.07980996396653,0.919218786610021,0,1.65993539510744,1.0752457327937,3.69281605644543,2.28719109006024,2.08365348222704,1.11673199600552,0.56276261003168,1.5279824777681,2.35702868378934,1.13897344639282,2.42319279572891,1.28734528666413,0.68014404096107,0,0.860423876981386,0,0,0,0,0.421333260395256,0.340860645156116,0.519572009205738,0.70667914902068,2.39433813620357,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,0.11418387971906,0.776813650941515,0.445326417194474,0.520455980298408,0.913396434936424,1.84492397804847,0.904335843315735,1.17588707135705,0.628332956648377,0,1.15679485535929,0.884610551949874,0.485300549842228,1.32504911076236,0.484875253135222,0,1.17112318804619,0.628340120440365,0,0.11981512450592,0,0.127070227073065,1.64769703345305,0.457500602818626,1.00523481690292,0.347648640384553,1.27857728665165,0.20778804455956,0.648965052271031,1.32391173005411,0.124406970610093,0.252722758433675,2.10441855886474,1.43132487258974,1.37941262660084,1.98068342785884,1.65775299619287,1.76894897793452,2.17793324484245,2.06143794031403,0.517406741478031,1.29340795759705,2.26927296201383,1.40760899331159,1.7535658594206,1.11218899690239,0.348252166522167,1.64625709126355,1.19420560091096,0,0.51469581422943,0,1.44988040774851,0.703578179943289,0.720248245844059,1.42046841351126,0.590292695242212,1.85120535464854,2.09280550275367,1.3413670069981,0.700592054203017,1.48103864922132,1.47750717671186,0.972825714550269,1.16959989940266,1.97595103761946,1.61047702512446,0.841159794256509,1.23485534855141,0.330418782983798,0,1.2797295032114,0.928946687441754,0.128867461322093,1.4117846723634,0.889512175379481,0.380451252225118,0,0.329397909448022,0.502670417600539,0.397912944082302,0.38992817423824,0,0,0,0.758671603812327,0.342745537829186,1.1270773567308,1.22190796707189,1.55161989734101,1.19230893813542,0.948548056863859,0.295220295959204,0.470996183524124,0.123397163921801,0,1.16791574001266,0.589676985339609,1.12431056192427,1.01430060694251,0.482354319504834,0.50925170356284,0.863088412352432,0.162135226775035,0.274561413188081,0,0,0,0,0,0,1.29327233116623,0.568474235311454,1.62964976442026,2.20668611507745,1.64283173801951,1.34005005953453,1.6663054862021,1.17080188714679,0.788175720530955,1.7717175171902,0.318909537314974,1.47476983244164,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0.963303539926752,0.820481806145422,0.819674726883377,0,1.57754109708128,1.56175497718655,2.36965737506079,0.955875191810208,2.45078541490634,0.849229592366497,0,1.46127928955656,2.37172666767914,1.28528526568723,1.98716119291576,1.24645922567079,0.977321756121456,0.989820737835213,0,0.728341908464944,0.906970670894253,0.377210159511796,0.590603785761546,0.922305443831782,0.516856586336442,0,0.356497378384721,0.316036757935816,1.05418608574999,0,1.36175842301515,2.34079422240703,1.4229455216103,0.643011105094777,0.709360934569094,1.42695054081656,0.987294123612726,0.608929898229199,0.23467170806371,0.21183207086382,0.882113592219848,0.32977250588296,1.45317984026315,1.02531972377865,0.835606408021955,0.820704498725306,0,1.48340241608408,0.683483523191411,0.412773735926445,1.29636169158798,1.13021074202815,1.36694227721025,1.3726690392391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| ||
|EntrezGene=66866 | |||
|HGNC= | |||
|UniProt=Q8BZW8,F6ZR71,B2RR26 | |||
|association_with_transcript=0bp_to_ENSMUST00000071423,ENSMUST00000165411,NM_025811,uc008hzc.1_5end | |||
|description=CAGE_peak_5_at_Nhlrc2_5end | |||
|id=chr19:56622744..56622773,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.97e-08!33;CL:0000047!1.97e-08!33;CL:0000031!1.97e-08!33;CL:0000404!1.97e-08!33;CL:0000117!3.88e-07!23;CL:0000337!3.88e-07!23;CL:0000221!6.38e-07!44;CL:0000133!6.38e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.30e-08,33;CL:0000047,2.30e-08,33;CL:0000031,2.30e-08,33;CL:0000404,2.30e-08,33;CL:0000117,1.04e-07,23;CL:0000337,1.04e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!3.31e-08!94;UBERON:0002346!3.83e-07!71;UBERON:0003075!3.83e-07!71;UBERON:0007284!3.83e-07!71;UBERON:0007811!4.68e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.49e-07,43 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0.233612640595526,0.774739940649458,0.140788722151667,0,1.54096171402954,1.83475965689274,1.19840510951844,0.524522414513984,1.66554880907831,1.82227740650843,1.39912375625629,0.473193248037357,0.685572168028694,1.27316895539409,0.255129870453209,0.695036658406197,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,1.90509202037889,2.46025915033828,0,0,0,0,0,0,0,0,0,0.971020706062307,0.629484089877886,0.202753862439029,0.550640256485045,0.782391344348039,1.30815093828268,0.878744730937887,1.36100929351998,0.279972843250725,0,0.503347818173209,1.45072428402269,0.336093799142464,0.257259436035947,0.573066879877513,0,4.04632921719196,4.7609188134483,2.53532561402472,0.677689064138264,0,0,0,0,0.299600110518405,0.384218305321555,3.11068836925433,4.86021377994086,3.36519938162211,0.571301968807607,0.662605622854841,2.81728838194394,5.07980996396653,0.919218786610021,0,1.65993539510744,1.0752457327937,3.69281605644543,2.28719109006024,2.08365348222704,1.11673199600552,0.56276261003168,1.5279824777681,2.35702868378934,1.13897344639282,2.42319279572891,1.28734528666413,0.68014404096107,0,0.860423876981386,0,0,0,0,0.421333260395256,0.340860645156116,0.519572009205738,0.70667914902068,2.39433813620357,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,0.11418387971906,0.776813650941515,0.445326417194474,0.520455980298408,0.913396434936424,1.84492397804847,0.904335843315735,1.17588707135705,0.628332956648377,0,1.15679485535929,0.884610551949874,0.485300549842228,1.32504911076236,0.484875253135222,0,1.17112318804619,0.628340120440365,0,0.11981512450592,0,0.127070227073065,1.64769703345305,0.457500602818626,1.00523481690292,0.347648640384553,1.27857728665165,0.20778804455956,0.648965052271031,1.32391173005411,0.124406970610093,0.252722758433675,2.10441855886474,1.43132487258974,1.37941262660084,1.98068342785884,1.65775299619287,1.76894897793452,2.17793324484245,2.06143794031403,0.517406741478031,1.29340795759705,2.26927296201383,1.40760899331159,1.7535658594206,1.11218899690239,0.348252166522167,1.64625709126355,1.19420560091096,0,0.51469581422943,0,1.44988040774851,0.703578179943289,0.720248245844059,1.42046841351126,0.590292695242212,1.85120535464854,2.09280550275367,1.3413670069981,0.700592054203017,1.48103864922132,1.47750717671186,0.972825714550269,1.16959989940266,1.97595103761946,1.61047702512446,0.841159794256509,1.23485534855141,0.330418782983798,0,1.2797295032114,0.928946687441754,0.128867461322093,1.4117846723634,0.889512175379481,0.380451252225118,0,0.329397909448022,0.502670417600539,0.397912944082302,0.38992817423824,0,0,0,0.758671603812327,0.342745537829186,1.1270773567308,1.22190796707189,1.55161989734101,1.19230893813542,0.948548056863859,0.295220295959204,0.470996183524124,0.123397163921801,0,1.16791574001266,0.589676985339609,1.12431056192427,1.01430060694251,0.482354319504834,0.50925170356284,0.863088412352432,0.162135226775035,0.274561413188081,0,0,0,0,0,0,1.29327233116623,0.568474235311454,1.62964976442026,2.20668611507745,1.64283173801951,1.34005005953453,1.6663054862021,1.17080188714679,0.788175720530955,1.7717175171902,0.318909537314974,1.47476983244164,0.345369963731791,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0.963303539926752,0.820481806145422,0.819674726883377,0,1.57754109708128,1.56175497718655,2.36965737506079,0.955875191810208,2.45078541490634,0.849229592366497,0,1.46127928955656,2.37172666767914,1.28528526568723,1.98716119291576,1.24645922567079,0.977321756121456,0.989820737835213,0,0.728341908464944,0.906970670894253,0.377210159511796,0.590603785761546,0.922305443831782,0.516856586336442,0,0.356497378384721,0.316036757935816,1.05418608574999,0,1.36175842301515,2.34079422240703,1.4229455216103,0.643011105094777,0.709360934569094,1.42695054081656,0.987294123612726,0.608929898229199,0.23467170806371,0.21183207086382,0.882113592219848,0.32977250588296,1.45317984026315,1.02531972377865,0.835606408021955,0.820704498725306,0,1.48340241608408,0.683483523191411,0.412773735926445,1.29636169158798,1.13021074202815,1.36694227721025,1.37266903923914,0.509935289981566,0.419854356970974,0.138199973804424,0,1.73984796469624,1.62655573701479,1.40406943068342,1.46361807210128,0.655087691238533,1.21377911746339,0.495920734352016,0.26175594198403,0.388844919875379,0,0.56369293868419,1.34564891439581,1.98550188548517,1.94451188344048,1.03327858782185,1.35164900392623,1.87771581833206,0.5208175393758,0.943734099831398,1.69108884578204,0.576060012515731,1.58005560314089,1.01362607645082,1.74608627180206,1.42912905275575,1.9692936523423,1.78813219303138,2.76449533895928,1.62458479892035,1.81739609906666,1.143102099825,1.20991422164209,1.16949456887703,1.44317762460494,1.75315353272353,0.453460767230423,0,0.179427713218951,0.167884616364078,0.579568782096571,0.187682475451182,0.549454872801795,0,1.50471631210609,1.12950368523413,0,1.71868654031819,1.03111909406213,0,0.755393897389701,0.675022500231806,0.900642406448441,0.453142408984205,0.5177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| |||
|short_description=p5@Nhlrc2 | |||
}} | |||
Revision as of 18:09, 13 September 2013
| Short description: | p5@Nhlrc2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Nhlrc2_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000071423, ENSMUST00000165411, NM_025811, uc008hzc.1_5end |
| EntrezGene: | Nhlrc2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuron | 2.30e-08 | 33 |
| neuronal stem cell | 2.30e-08 | 33 |
| neuroblast | 2.30e-08 | 33 |
| electrically signaling cell | 2.30e-08 | 33 |
| CNS neuron (sensu Vertebrata) | 1.04e-07 | 23 |
| neuroblast (sensu Vertebrata) | 1.04e-07 | 23 |
| Ontology term | p-value | n |
|---|---|---|
| anterior region of body | 1.49e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
