FFCP PHASE1:Mm9::chr1:122161824..122161881,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=68428|HGNC=|UniProt=Q8CI59,D3YTP0|association_with_transcript=0bp_to_ENSMUST00000112640,ENSMUST00000140490,NM_133186,uc007cji.1_5end|description=CAGE_peak_1_at_Steap3_5end|id=chr1:122161824..122161881,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004872!1.59e-09!33;UBERON:0003914!5.93e-09!47|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.38e-09,33;UBERON:0003914,5.26e-09,47|phase1_expression=14.2532473923267,1.04692622291808,0.909998478779072,1.81478526784098,1.00179145989269,1.34303417529512,2.80335168714631,0,0.140788722151667,0.234064526321993,0.34243593645101,0.398860794976682,0.171200729931206,0,47.9678057014554,34.6232707236602,35.6776557845355,1.73504190947031,1.50825876966313,3.81950686618227,5.18764069921526,19.9574811913779,17.7615856614476,1.75991665072747,1.83527424853736,0,0.430761996159075,0.215471232685889,8.36103045608045,5.79669298447841,2.21730510655305,3.17515336729816,9.22597181376855,0,7.79899373328441,8.97667084935859,8.77928231928187,1.25559489221072,3.1253413780952,0.523523743973798,0,1.36609096991689,0,27.697299954627,27.6759022229275,20.3736894899467,71.1976123356716,9.59310688073965,25.2639110144643,16.5265414213141,19.1781397626747,12.9377307928474,0.838913030288682,0,0.672187598284928,7.20326420900652,27.2206767941819,12.3761302146586,0.606949382578793,1.05798195854407,0.633831403506179,24.0579617769084,19.5644855144451,38.6956878431002,45.4878526780808,33.3925654024667,55.4260204459049,66.4697668206289,0.518448061542388,0.540023753326763,0.420649922702764,3.42781181284564,5.07997644188711,0.857435594504678,0.479227355091182,0,2.20231761998777,2.80912143787413,3.37934373163736,1.18697658957174,0.640413505216868,0.52091337055676,2.51264699101243,9.00420176050688,4.12555268997387,2.35702868378934,2.42031857358475,1.4911955666024,42.4823944599163,84.8668619999201,0,2.58127163094416,6.11974200336975,6.47643829965381,9.74664626171504,3.58421509677868,13.0613310722529,25.7349787092867,15.0675882669664,15.1936017039446,2.81686839553361,6.41632387071589,0,0,0.432982082022428,0.253359865475099,1.51657333504435,4.33898742932428,7.76813650941515,11.5784868470563,7.80683970447611,5.1759131313064,8.53277339847416,5.72746034099966,7.99603208522793,13.3206586809456,3.46072954828123,26.8954803871036,22.9998743506967,26.5297633913751,30.2552880290739,22.3042616442202,14.9113408974498,1.75668478206928,1.8850203613211,7.15279754584056,3.23500836165985,7.7987355029143,4.44745794755726,5.54225365797844,5.49000723382352,1.50785222535437,5.21472960576829,2.81287003063364,3.94797284663164,3.0825839982874,11.7115268427864,17.416975885413,2.27450482590307,8.83855794723191,1.17108398666433,1.37941262660084,3.24111833649629,4.21973489940002,5.30684693380357,8.96796041993949,6.74652416830048,13.1938719076898,2.58681591519411,1.70195472151037,3.16712023495108,4.60311038097907,2.78047249225598,6.96504333044333,6.99659263787008,5.37392520409932,7.72434506044558,5.91900186363845,7.10408748488982,14.2916783049496,11.9608290590359,10.4435995647389,12.5474709860161,11.0187969778546,9.87309522479221,12.7893669612724,16.3646774853768,11.5597688943498,21.228220638839,16.2525789438304,18.9701014337302,19.7369983024199,23.9309625667245,19.5941371390143,6.09840850835969,2.6755199218614,0.330418782983798,3.70230793328962,2.77274725695804,1.39342003116263,2.96395161040815,1.4117846723634,1.77902435075896,1.71203063501303,7.11793592316767,1.97638745668813,5.02670417600539,3.18330355265841,7.40863531052657,6.29173586057955,9.94235029423593,6.37252074413975,1.32767530667157,1.82797620175566,1.1270773567308,1.83286195060783,1.93952487167626,2.59502533594179,7.71485752915939,10.4803205065518,7.06494275286187,8.88459580236964,11.2651998293117,42.3786568518879,45.0120098809235,50.1442510618224,41.7891850060316,33.5236252055859,24.6987076227977,18.9879450717535,9.24170792617702,12.6298250066517,12.9391385874619,11.1642284300551,8.11297950097858,6.81962970457202,6.99649912735457,12.0610880340842,16.2582807346612,3.97931964718018,2.28150967018836,1.18821560042632,1.17345124144251,2.01007508930179,3.09456733151818,3.51240566144038,4.25614889086716,3.98636441367795,3.98636921643718,19.3358711364571,15.3689633860647,12.5844680965915,36.1899081454253,16.86107619838,74.7481694988935,32.2845993176537,4.49541651965817,4.57125577709592,46.8853943777292,20.4501451035542,1.89304931649754,2.34263246577983,2.58508077279359,12.4263774935327,29.8550223270408,21.5138163399513,6.47697122679831,9.05993159525067,9.48690667071656,8.03303291054518,31.6526390014439,8.369083372361,8.95878276444668,33.6539050863972,2.65490276679926,3.15614827001476,3.32555912661226,3.58349651536206,5.90603785761546,3.99665692327106,5.42699415653264,12.3601468022352,10.6949213515416,7.9009189483954,8.4334886859999,4.12542172992747,32.0013229408561,2.16073312837572,2.58717367565509,4.28674070063185,2.83744373827638,7.13475270408282,6.08831376227848,7.30715877875038,16.6616912725234,6.99045833850607,0.441056796109924,13.1909002353184,10.0107944551461,11.2785169615651,11.5791173683042,12.9671310798598,4.66369338607761,6.11903496634682,44.2555581266438,8.87463532241857,26.1124283591293,46.9037457941681,47.2962027914747,38.6635112719023,2.03974115992626,3.63873776041511,3.45499934511059,10.5013767981662,2.21435195506795,4.67634774391752,2.16010681643603,1.25452977608681,2.83871332870031,4.85511646985355,8.84391976261094,8.63794608547298,13.3503422490547,3.72803587852155,0,11.8118071374743,11.7475528224539,14.5838391258036,15.4991788173277,16.726656423587,23.4714477291508,17.7077963387772,9.6470596871654,2.41584120826006,3.74439008135225,2.52808896502543,3.24360344464263,4.72470402958205,3.63778304337826,2.8644271306797,4.96703386953162,4.56742708175882,3.39685912501528,2.72609414859999,1.5241361331,1.91569751759997,2.53390489923356,1.92423683280659,2.10378423926824,11.789979947991,1.10992976687032,0.448569283047378,2.01461539636894,12.7505132061246,21.3958022014347,47.8025739337562,15.0057865355346,2.50786052017682,3.3885110557024,4.60325236507177,5.15605962095457,2.749650917499,2.74033007908257,3.7769694869485,4.72515750162264,2.2516060161211,1.81256963593682,3.10656187051092,0.726511433089237,6.3843979744165,9.56108192223151,9.23805524859517,5.65955539095552,7.16989682955055,10.2233494788743,12.7741735488114,14.1204452220399,12.6348605881899,10.6461305953901,11.6948331659367,8.05316964240989,10.4360998419937,8.84506221916444,10.0021675169445,9.15486174964358,11.5745532278223,8.65380391686944,12.3647092912894,8.22886205724997,7.63145966485151,8.10683045820891,11.046327664057,10.0697037044404,7.95377314181759,11.3415343181119,10.7858581689516,10.0495044245938,14.0285567914435,10.3212465768031,10.2444661670586,10.2307760792422,7.7468420592983,10.2240503820005,9.99242311751784,14.7376913320607,10.7435527024149,12.242453252406,29.7798415811346,27.5922724388302|short_description=p1@Steap3}} | ||
|EntrezGene=68428 | |||
|HGNC= | |||
|UniProt=Q8CI59,D3YTP0 | |||
|association_with_transcript=0bp_to_ENSMUST00000112640,ENSMUST00000140490,NM_133186,uc007cji.1_5end | |||
|description=CAGE_peak_1_at_Steap3_5end | |||
|id=chr1:122161824..122161881,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!1.59e-09!33;UBERON:0003914!5.93e-09!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,1.38e-09,33;UBERON:0003914,5.26e-09,47 | |||
|phase1_expression=14.2532473923267,1.04692622291808,0.909998478779072,1.81478526784098,1.00179145989269,1.34303417529512,2.80335168714631,0,0.140788722151667,0.234064526321993,0.34243593645101,0.398860794976682,0.171200729931206,0,47.9678057014554,34.6232707236602,35.6776557845355,1.73504190947031,1.50825876966313,3.81950686618227,5.18764069921526,19.9574811913779,17.7615856614476,1.75991665072747,1.83527424853736,0,0.430761996159075,0.215471232685889,8.36103045608045,5.79669298447841,2.21730510655305,3.17515336729816,9.22597181376855,0,7.79899373328441,8.97667084935859,8.77928231928187,1.25559489221072,3.1253413780952,0.523523743973798,0,1.36609096991689,0,27.697299954627,27.6759022229275,20.3736894899467,71.1976123356716,9.59310688073965,25.2639110144643,16.5265414213141,19.1781397626747,12.9377307928474,0.838913030288682,0,0.672187598284928,7.20326420900652,27.2206767941819,12.3761302146586,0.606949382578793,1.05798195854407,0.633831403506179,24.0579617769084,19.5644855144451,38.6956878431002,45.4878526780808,33.3925654024667,55.4260204459049,66.4697668206289,0.518448061542388,0.540023753326763,0.420649922702764,3.42781181284564,5.07997644188711,0.857435594504678,0.479227355091182,0,2.20231761998777,2.80912143787413,3.37934373163736,1.18697658957174,0.640413505216868,0.52091337055676,2.51264699101243,9.00420176050688,4.12555268997387,2.35702868378934,2.42031857358475,1.4911955666024,42.4823944599163,84.8668619999201,0,2.58127163094416,6.11974200336975,6.47643829965381,9.74664626171504,3.58421509677868,13.0613310722529,25.7349787092867,15.0675882669664,15.1936017039446,2.81686839553361,6.41632387071589,0,0,0.432982082022428,0.253359865475099,1.51657333504435,4.33898742932428,7.76813650941515,11.5784868470563,7.80683970447611,5.1759131313064,8.53277339847416,5.72746034099966,7.99603208522793,13.3206586809456,3.46072954828123,26.8954803871036,22.9998743506967,26.5297633913751,30.2552880290739,22.3042616442202,14.9113408974498,1.75668478206928,1.8850203613211,7.15279754584056,3.23500836165985,7.7987355029143,4.44745794755726,5.54225365797844,5.49000723382352,1.50785222535437,5.21472960576829,2.81287003063364,3.94797284663164,3.0825839982874,11.7115268427864,17.416975885413,2.27450482590307,8.83855794723191,1.17108398666433,1.37941262660084,3.24111833649629,4.21973489940002,5.30684693380357,8.96796041993949,6.74652416830048,13.1938719076898,2.58681591519411,1.70195472151037,3.16712023495108,4.60311038097907,2.78047249225598,6.96504333044333,6.99659263787008,5.37392520409932,7.72434506044558,5.91900186363845,7.10408748488982,14.2916783049496,11.9608290590359,10.4435995647389,12.5474709860161,11.0187969778546,9.87309522479221,12.7893669612724,16.3646774853768,11.5597688943498,21.228220638839,16.2525789438304,18.9701014337302,19.7369983024199,23.9309625667245,19.5941371390143,6.09840850835969,2.6755199218614,0.330418782983798,3.70230793328962,2.77274725695804,1.39342003116263,2.96395161040815,1.4117846723634,1.77902435075896,1.71203063501303,7.11793592316767,1.97638745668813,5.02670417600539,3.18330355265841,7.40863531052657,6.29173586057955,9.94235029423593,6.37252074413975,1.32767530667157,1.82797620175566,1.1270773567308,1.83286195060783,1.93952487167626,2.59502533594179,7.71485752915939,10.4803205065518,7.06494275286187,8.88459580236964,11.2651998293117,42.3786568518879,45.0120098809235,50.1442510618224,41.7891850060316,33.5236252055859,24.6987076227977,18.9879450717535,9.24170792617702,12.6298250066517,12.9391385874619,11.1642284300551,8.11297950097858,6.81962970457202,6.99649912735457,12.0610880340842,16.2582807346612,3.97931964718018,2.28150967018836,1.18821560042632,1.17345124144251,2.01007508930179,3.09456733151818,3.51240566144038,4.25614889086716,3.98636441367795,3.98636921643718,19.3358711364571,15.3689633860647,12.5844680965915,36.1899081454253,16.86107619838,74.7481694988935,32.2845993176537,4.49541651965817,4.57125577709592,46.8853943777292,20.4501451035542,1.89304931649754,2.34263246577983,2.58508077279359,12.4263774935327,29.8550223270408,21.5138163399513,6.47697122679831,9.05993159525067,9.48690667071656,8.03303291054518,31.6526390014439,8.369083372361,8.95878276444668,33.6539050863972,2.65490276679926,3.15614827001476,3.32555912661226,3.58349651536206,5.90603785761546,3.99665692327106,5.42699415653264,12.3601468022352,10.6949213515416,7.9009189483954,8.4334886859999,4.12542172992747,32.0013229408561,2.16073312837572,2.58717367565509,4.28674070063185,2.83744373827638,7.13475270408282,6.08831376227848,7.30715877875038,16.6616912725234,6.99045833850607,0.441056796109924,13.1909002353184,10.0107944551461,11.2785169615651,11.5791173683042,12.9671310798598,4.66369338607761,6.11903496634682,44.2555581266438,8.87463532241857,26.1124283591293,46.9037457941681,47.2962027914747,38.6635112719023,2.03974115992626,3.63873776041511,3.45499934511059,10.5013767981662,2.21435195506795,4.67634774391752,2.16010681643603,1.25452977608681,2.83871332870031,4.85511646985355,8.84391976261094,8.63794608547298,13.3503422490547,3.72803587852155,0,11.8118071374743,11.7475528224539,14.5838391258036,15.4991788173277,16.726656423587,23.4714477291508,17.7077963387772,9.6470596871654,2.41584120826006,3.74439008135225,2.52808896502543,3.24360344464263,4.72470402958205,3.63778304337826,2.8644271306797,4.96703386953162,4.56742708175882,3.39685912501528,2.72609414859999,1.5241361331,1.91569751759997,2.53390489923356,1.92423683280659,2.10378423926824,11.789979947991,1.10992976687032,0.448569283047378,2.01461539636894,12.7505132061246,21.3958022014347,47.8025739337562,15.0057865355346,2.50786052017682,3.3885110557024,4.60325236507177,5.15605962095457,2.749650917499,2.74033007908257,3.7769694869485,4.72515750162264,2.2516060161211,1.81256963593682,3.10656187051092,0.726511433089237,6.3843979744165,9.56108192223151,9.23805524859517,5.65955539095552,7.16989682955055,10.2233494788743,12.7741735488114,14.1204452220399,12.6348605881899,10.6461305953901,11.6948331659367,8.05316964240989,10.4360998419937,8.84506221916444,10.0021675169445,9.15486174964358,11.5745532278223,8.65380391686944,12.3647092912894,8.22886205724997,7.63145966485151,8.10683045820891,11.046327664057,10.0697037044404,7.95377314181759,11.3415343181119,10.7858581689516,10.0495044245938,14.0285567914435,10.3212465768031,10.2444661670586,10.2307760792422,7.7468420592983,10.2240503820005,9.99242311751784,14.7376913320607,10.7435527024149,12.242453252406,29.7798415811346,27.5922724388302 | |||
|short_description=p1@Steap3 | |||
}} | |||
Revision as of 18:36, 13 September 2013
| Short description: | p1@Steap3 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Steap3_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000112640, ENSMUST00000140490, NM_133186, uc007cji.1_5end |
| EntrezGene: | Steap3 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| splanchnic layer of lateral plate mesoderm | 1.38e-09 | 33 |
| epithelial tube | 5.26e-09 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
