FFCP PHASE1:Mm9::chr1:172797864..172797873,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=226641|HGNC=|UniProt=Q8BZ84|association_with_transcript=28bp_to_NM_001081304,uc007dmj.1_5end|description=CAGE_peak_2_at_Atf6_5end|id=chr1:172797864..172797873,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002100!3.45e-08!98;UBERON:0003914!7.38e-08!47;UBERON:0000926!9.58e-08!193;UBERON:0004120!9.58e-08!193;UBERON:0006603!9.58e-08!193;UBERON:0005256!2.36e-07!47;UBERON:0000466!4.32e-07!79|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.82e-08,90;UBERON:0003914,1.03e-07,47;UBERON:0005256,7.13e-07,45;UBERON:0005177,8.26e-07,79|phase1_expression=2.40223270657191,1.04692622291808,1.81999695755814,0.60492842261366,1.50268718983904,1.51091344720701,0.700837921786577,0,2.111830832275,1.40438715793196,2.56826952338257,2.23362045186942,0.342401459862411,0.262261207256992,0.999329285446988,2.42970320867791,2.79824751251259,4.10100814965709,5.34746291062381,2.97072756258621,2.21112554392781,1.68794617041505,3.39559725880616,0.95995453676044,2.98232065387321,0.57423196411502,0.86152399231815,0.861884930743556,1.71021077510736,3.52842181663903,2.88249663851896,0,2.46025915033828,0,0.288851619751275,0.498703936075477,0.612508068787107,0.837063261473815,3.1253413780952,3.14114246384279,1.17646297606203,2.73218193983378,0.485510353031154,2.7697299954627,2.63580021170738,3.85448179539531,0,0.65407546914134,1.09843091367236,1.94429899074283,0.839918529752175,0,3.02008690903925,0,0,1.54355661621568,2.29226751951005,2.06268836910977,1.01158230429799,0.528990979272033,0.633831403506179,0,0,0.449949858640699,0.988866362566974,0,0.599200221036809,0.768436610643109,0.311068836925433,1.08004750665353,0.210324961351382,0.856952953211411,0.883474163806454,0.489963196859816,0.479227355091182,0,1.10115880999389,1.40456071893706,1.22885226604995,0.131886287730194,0.914876436024097,0.52091337055676,0.837548997004143,0.56276261003168,0.916789486660861,0.883885756421003,1.56608848879013,2.60959224155421,4.92220256665696,2.64500460373749,4.05810284182349,3.44169550792555,5.439770669662,2.69851595818909,9.09686984426737,7.16843019355737,1.82577746171277,2.38602451609281,0.519572009205738,0.35333957451034,2.25349471642689,3.84979432242953,0,0,1.73192832808971,3.04031838570118,2.02209778005913,4.33898742932428,8.54495016035667,2.82040064223167,0.867426633830679,0.913396434936424,1.61430848079241,1.3565037649736,4.11560474974967,2.13633205260448,3.70792451601561,3.90418263683761,0,2.10296904931632,2.42925670306433,0.484875253135222,0,0.292780797011547,1.04723353406728,2.04365644166873,7.18890747035522,4.79922184794726,9.14905634926066,0.748953197024114,2.74500361691176,0.753926112677186,2.9550134432687,2.30143911597297,0.62336413367868,2.75810147215188,1.83310854930569,3.4833951770826,6.82351447770922,1.89397670297827,1.69156575851515,1.60931473103431,1.0803727788321,1.20563854268572,2.04109497453984,2.0498195245576,1.03071897015702,0.776110112217047,0.862271971731369,2.08016688184601,0.703804496655795,0.657587197282725,1.66828349535359,2.43776516565517,1.64625709126355,0.995171334092466,7.02213187313235,4.11756651383544,5.11494298912067,1.86413195281952,1.64168241986767,2.70093092191522,1.42046841351126,0.983821158737019,0.771335564436891,2.32533944750408,1.87791380979733,4.32031766758527,3.94943639792353,2.95501435342371,4.86412857275134,3.36259971078264,3.51280184465681,3.89198614405078,3.15434922846191,0.720332286654991,1.32167513193519,1.05780226665418,0.853153002140936,0.928946687441754,1.54640953586512,1.61346819698674,1.77902435075896,0.951128130562796,1.42358718463353,1.97638745668813,2.01068167040216,2.78539060857611,2.14460495831032,1.79763881730844,2.16138049874694,2.38969527905241,0.948339504765408,1.02823661348756,1.1270773567308,2.44381593414377,1.93952487167626,1.96380295692892,1.70738650235495,1.62371162777562,1.41298855057237,2.34454611451421,7.41131567717872,1.83529616287703,0.589676985339609,0.449724224769707,1.01430060694251,0.964708639009667,1.78238096246994,1.43848068725405,6.64754429777645,3.0201755450689,4.31304619582064,4.09355042435354,4.36852742360385,3.53610429125956,6.09951205974501,6.27176577772377,3.51031061316549,0.757965647081939,1.14075483509418,0.678980343100753,2.34690248288502,0.837531287209079,0.952174563544055,4.68320754858717,3.62560831444239,2.6575762757853,1.59454768657487,2.78567635016755,2.07221978239075,2.89298117163023,1.50791283939272,2.17562273527484,2.45882136509518,4.69092468718045,1.44495530989013,0.703270119553219,3.77050374366353,1.76729649043061,1.57754109708128,0.390438744296638,0.430846795465598,0.477937595905104,1.11399337041197,1.13230612315533,0.809621403349789,0.292255857911312,0.790575555893047,0.963963949265421,2.41298144854057,1.42452482933804,2.60619134965722,0.824850614862677,14.6019652173959,0.242780636154981,0.302323556964751,3.58349651536206,3.54362271456927,5.22639751504677,4.65170927702798,4.72593848320757,4.63446591900138,7.90091894839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| ||
|EntrezGene=226641 | |||
|HGNC= | |||
|UniProt=Q8BZ84 | |||
|association_with_transcript=28bp_to_NM_001081304,uc007dmj.1_5end | |||
|description=CAGE_peak_2_at_Atf6_5end | |||
|id=chr1:172797864..172797873,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!3.45e-08!98;UBERON:0003914!7.38e-08!47;UBERON:0000926!9.58e-08!193;UBERON:0004120!9.58e-08!193;UBERON:0006603!9.58e-08!193;UBERON:0005256!2.36e-07!47;UBERON:0000466!4.32e-07!79 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,1.82e-08,90;UBERON:0003914,1.03e-07,47;UBERON:0005256,7.13e-07,45;UBERON:0005177,8.26e-07,79 | |||
|phase1_expression=2.40223270657191,1.04692622291808,1.81999695755814,0.60492842261366,1.50268718983904,1.51091344720701,0.700837921786577,0,2.111830832275,1.40438715793196,2.56826952338257,2.23362045186942,0.342401459862411,0.262261207256992,0.999329285446988,2.42970320867791,2.79824751251259,4.10100814965709,5.34746291062381,2.97072756258621,2.21112554392781,1.68794617041505,3.39559725880616,0.95995453676044,2.98232065387321,0.57423196411502,0.86152399231815,0.861884930743556,1.71021077510736,3.52842181663903,2.88249663851896,0,2.46025915033828,0,0.288851619751275,0.498703936075477,0.612508068787107,0.837063261473815,3.1253413780952,3.14114246384279,1.17646297606203,2.73218193983378,0.485510353031154,2.7697299954627,2.63580021170738,3.85448179539531,0,0.65407546914134,1.09843091367236,1.94429899074283,0.839918529752175,0,3.02008690903925,0,0,1.54355661621568,2.29226751951005,2.06268836910977,1.01158230429799,0.528990979272033,0.633831403506179,0,0,0.449949858640699,0.988866362566974,0,0.599200221036809,0.768436610643109,0.311068836925433,1.08004750665353,0.210324961351382,0.856952953211411,0.883474163806454,0.489963196859816,0.479227355091182,0,1.10115880999389,1.40456071893706,1.22885226604995,0.131886287730194,0.914876436024097,0.52091337055676,0.837548997004143,0.56276261003168,0.916789486660861,0.883885756421003,1.56608848879013,2.60959224155421,4.92220256665696,2.64500460373749,4.05810284182349,3.44169550792555,5.439770669662,2.69851595818909,9.09686984426737,7.16843019355737,1.82577746171277,2.38602451609281,0.519572009205738,0.35333957451034,2.25349471642689,3.84979432242953,0,0,1.73192832808971,3.04031838570118,2.02209778005913,4.33898742932428,8.54495016035667,2.82040064223167,0.867426633830679,0.913396434936424,1.61430848079241,1.3565037649736,4.11560474974967,2.13633205260448,3.70792451601561,3.90418263683761,0,2.10296904931632,2.42925670306433,0.484875253135222,0,0.292780797011547,1.04723353406728,2.04365644166873,7.18890747035522,4.79922184794726,9.14905634926066,0.748953197024114,2.74500361691176,0.753926112677186,2.9550134432687,2.30143911597297,0.62336413367868,2.75810147215188,1.83310854930569,3.4833951770826,6.82351447770922,1.89397670297827,1.69156575851515,1.60931473103431,1.0803727788321,1.20563854268572,2.04109497453984,2.0498195245576,1.03071897015702,0.776110112217047,0.862271971731369,2.08016688184601,0.703804496655795,0.657587197282725,1.66828349535359,2.43776516565517,1.64625709126355,0.995171334092466,7.02213187313235,4.11756651383544,5.11494298912067,1.86413195281952,1.64168241986767,2.70093092191522,1.42046841351126,0.983821158737019,0.771335564436891,2.32533944750408,1.87791380979733,4.32031766758527,3.94943639792353,2.95501435342371,4.86412857275134,3.36259971078264,3.51280184465681,3.89198614405078,3.15434922846191,0.720332286654991,1.32167513193519,1.05780226665418,0.853153002140936,0.928946687441754,1.54640953586512,1.61346819698674,1.77902435075896,0.951128130562796,1.42358718463353,1.97638745668813,2.01068167040216,2.78539060857611,2.14460495831032,1.79763881730844,2.16138049874694,2.38969527905241,0.948339504765408,1.02823661348756,1.1270773567308,2.44381593414377,1.93952487167626,1.96380295692892,1.70738650235495,1.62371162777562,1.41298855057237,2.34454611451421,7.41131567717872,1.83529616287703,0.589676985339609,0.449724224769707,1.01430060694251,0.964708639009667,1.78238096246994,1.43848068725405,6.64754429777645,3.0201755450689,4.31304619582064,4.09355042435354,4.36852742360385,3.53610429125956,6.09951205974501,6.27176577772377,3.51031061316549,0.757965647081939,1.14075483509418,0.678980343100753,2.34690248288502,0.837531287209079,0.952174563544055,4.68320754858717,3.62560831444239,2.6575762757853,1.59454768657487,2.78567635016755,2.07221978239075,2.89298117163023,1.50791283939272,2.17562273527484,2.45882136509518,4.69092468718045,1.44495530989013,0.703270119553219,3.77050374366353,1.76729649043061,1.57754109708128,0.390438744296638,0.430846795465598,0.477937595905104,1.11399337041197,1.13230612315533,0.809621403349789,0.292255857911312,0.790575555893047,0.963963949265421,2.41298144854057,1.42452482933804,2.60619134965722,0.824850614862677,14.6019652173959,0.242780636154981,0.302323556964751,3.58349651536206,3.54362271456927,5.22639751504677,4.65170927702798,4.72593848320757,4.63446591900138,7.9009189483954,4.21674434299995,8.25084345985495,4.76615448055303,1.08036656418786,1.4229455216103,0.857348140126369,2.12808280370728,0.535106452806212,2.13913726782757,1.522324745573,3.28540391289194,5.2958017715955,14.3343458735725,3.13283880588812,5.9741837877485,3.31721087104857,4.17803204010978,6.07321329056727,2.04036585640896,1.48340241608408,2.05045056957423,1.03193433981611,1.66675074632741,1.31857919903284,1.36694227721025,2.28778173206523,3.73952545986482,3.77868921273877,4.83699908315483,4.77335309007557,0.790839983952838,2.43983360552218,0.972048067396211,1.46361807210128,2.83871332870031,2.69728692769641,2.23164330458407,1.30877970992015,3.24037433229482,6.2133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| |||
|short_description=p2@Atf6 | |||
}} | |||
Revision as of 19:38, 13 September 2013
| Short description: | p2@Atf6 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Atf6_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 28bp_to_NM_001081304, uc007dmj.1_5end |
| EntrezGene: | Atf6 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| trunk | 1.82e-08 | 90 |
| epithelial tube | 1.03e-07 | 47 |
| trunk mesenchyme | 7.13e-07 | 45 |
| trunk region element | 8.26e-07 | 79 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
