FFCP PHASE1:Mm9::chr1:93379594..93379607,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=83|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:93379594..93379607,+|id=chr1:93379594..93379607,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002369!4.68e-18!7;UBERON:0006858!4.68e-18!7;UBERON:0002342!2.91e-12!10;UBERON:0005062!2.91e-12!10;UBERON:0003064!2.11e-08!14;UBERON:0005172!1.12e-07!49;UBERON:0005173!1.12e-07!49;UBERON:0002417!1.12e-07!49;UBERON:0000916!1.12e-07!49;UBERON:0000991!1.34e-07!18;UBERON:0005564!1.34e-07!18|ontology_enrichment_uberon_v019_2=UBERON:0002369,6.06e-45,7;UBERON:0006858,6.06e-45,7;UBERON:0003064,2.80e-22,14;UBERON:0000991,4.50e-12,18;UBERON:0005564,4.50e-12,18;UBERON:0000473,4.64e-11,14;UBERON:0003135,2.55e-10,15;UBERON:0003101,1.13e-09,16;UBERON:0000079,1.13e-09,16;UBERON:0004176,4.23e-09,17;UBERON:0009196,4.23e-09,17;UBERON:0009117,4.23e-09,17;UBERON:0003133,5.58e-09,24;UBERON:0005156,2.90e-08,26;UBERON:0000990,2.90e-08,26;UBERON:0005172,1.17e-07,49;UBERON:0005173,1.17e-07,49;UBERON:0002417,1.17e-07,49;UBERON:0000916,1.17e-07,49;UBERON:0000926,1.47e-07,120;UBERON:0004120,1.47e-07,120;UBERON:0006603,1.47e-07,120|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,46.3139473882253,3.46970653532272,33.4912026143355,49.8129474073086,90.7350296126788,31.7489509266403,15.2056575508907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18937693500343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,1.02823661348756,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13984746692355,5.29467169462712,4.66682852025714,1.03327858782185,4.05494701177868,0.469428954583016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0.50695859978048,0,0.0936415074698824,0.128050304809739,0.17230640686684,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0|short_description=p@chr1:93379594..93379607,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=83 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:93379594..93379607,+ | |||
|id=chr1:93379594..93379607,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002369!4.68e-18!7;UBERON:0006858!4.68e-18!7;UBERON:0002342!2.91e-12!10;UBERON:0005062!2.91e-12!10;UBERON:0003064!2.11e-08!14;UBERON:0005172!1.12e-07!49;UBERON:0005173!1.12e-07!49;UBERON:0002417!1.12e-07!49;UBERON:0000916!1.12e-07!49;UBERON:0000991!1.34e-07!18;UBERON:0005564!1.34e-07!18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,6.06e-45,7;UBERON:0006858,6.06e-45,7;UBERON:0003064,2.80e-22,14;UBERON:0000991,4.50e-12,18;UBERON:0005564,4.50e-12,18;UBERON:0000473,4.64e-11,14;UBERON:0003135,2.55e-10,15;UBERON:0003101,1.13e-09,16;UBERON:0000079,1.13e-09,16;UBERON:0004176,4.23e-09,17;UBERON:0009196,4.23e-09,17;UBERON:0009117,4.23e-09,17;UBERON:0003133,5.58e-09,24;UBERON:0005156,2.90e-08,26;UBERON:0000990,2.90e-08,26;UBERON:0005172,1.17e-07,49;UBERON:0005173,1.17e-07,49;UBERON:0002417,1.17e-07,49;UBERON:0000916,1.17e-07,49;UBERON:0000926,1.47e-07,120;UBERON:0004120,1.47e-07,120;UBERON:0006603,1.47e-07,120 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,46.3139473882253,3.46970653532272,33.4912026143355,49.8129474073086,90.7350296126788,31.7489509266403,15.2056575508907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18937693500343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189667900953082,1.02823661348756,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325773918707152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.13984746692355,5.29467169462712,4.66682852025714,1.03327858782185,4.05494701177868,0.469428954583016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0,0,0.50695859978048,0,0.0936415074698824,0.128050304809739,0.17230640686684,0,0,0.192909220463705,0.412085900803307,0.147198920134397,0,0,0.238436189947321,0,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0,0,0,0 | |||
|short_description=p@chr1:93379594..93379607,+ | |||
}} |
Revision as of 21:17, 13 September 2013
Short description: | p@chr1:93379594..93379607, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:93379594..93379607, + |
Coexpression cluster: | MCL_coexpression_mm9:83 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adrenal gland | 6.06e-45 | 7 |
adrenal/interrenal gland | 6.06e-45 | 7 |
intermediate mesoderm | 2.80e-22 | 14 |
gonad | 4.50e-12 | 18 |
gonad primordium | 4.50e-12 | 18 |
testis | 4.64e-11 | 14 |
male reproductive organ | 2.55e-10 | 15 |
male organism | 1.13e-09 | 16 |
male reproductive system | 1.13e-09 | 16 |
external genitalia | 4.23e-09 | 17 |
indifferent external genitalia | 4.23e-09 | 17 |
indifferent gonad | 4.23e-09 | 17 |
reproductive organ | 5.58e-09 | 24 |
reproductive structure | 2.90e-08 | 26 |
reproductive system | 2.90e-08 | 26 |
abdomen element | 1.17e-07 | 49 |
abdominal segment element | 1.17e-07 | 49 |
abdominal segment of trunk | 1.17e-07 | 49 |
abdomen | 1.17e-07 | 49 |
mesoderm | 1.47e-07 | 120 |
mesoderm-derived structure | 1.47e-07 | 120 |
presumptive mesoderm | 1.47e-07 | 120 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.