FFCP PHASE1:Mm9::chr1:94728307..94728326,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14733|HGNC=|MCL_coexpression_id=1431|UniProt=Q3U379,Q9QZF2|association_with_transcript=44bp_to_NM_016696,uc007cbs.1_5end|description=CAGE_peak_7_at_Gpc1_5end|id=chr1:94728307..94728326,+|ontology_enrichment_celltype=CL:0000221!8.56e-10!44;CL:0000133!8.56e-10!44;CL:0002319!2.49e-09!43|ontology_enrichment_celltype_v019_2=CL:0000221,2.17e-09,44;CL:0000133,2.17e-09,44;CL:0002319,7.39e-09,43;CL:0000107,1.95e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000010!1.33e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0000010,3.44e-09,11;UBERON:0002410,1.95e-07,9|phase1_expression=1.92178616525753,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.0992909512008853,0,0.47997726838022,0.91763712426868,0.57423196411502,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0,0,0,1.25559489221072,0.7813353445238,0,0,0.683045484958446,0,0.251793635951155,0.506884656097573,0.367093504323363,0.782391344348039,0.872100625521786,3.73466510648602,2.91644848611425,1.25987779462826,4.31257693094915,0,0,0,0,0,0,1.41621522601718,0.528990979272033,0.633831403506179,1.0165335962074,1.77858959222228,3.5995988691256,4.94433181283487,2.1314403448383,5.69240209984969,5.37905627450176,1.76272340924412,2.02508907497536,1.47227472945967,1.14260393761521,1.32521124570968,2.57230678351403,2.39613677545591,1.83843757322004,2.20231761998777,1.53224805702225,1.53606533256243,0.659431438650969,0.457438218012048,0,1.67509799400829,0.56276261003168,0.45839474333043,0.589257170947335,1.28134512719193,0.745597783301202,21.7334174866238,18.8928900266964,0.289864488701678,0,0.679971333707751,0,0,0.896053774194671,1.82577746171277,1.36344258062446,1.29893002301434,1.06001872353102,3.38024207464033,0,0,7.11066703153331,2.81438353314578,2.78695852022608,2.52762222507392,0.11418387971906,0,0.29688427812965,0.693941307064543,0.608930956624282,0.691846491768175,0.60289056221049,0.940709657085638,0,0.741584903203122,0.144599356919912,2.65383165584962,6.63244084784378,4.85851340612866,2.90925151881133,1.86391761218122,0,0.41889341362691,0,0.239630249011841,0,0.381210681219194,0.599162557619291,1.37250180845588,0.376963056338593,0.695297280769106,0.511430914660661,2.70124457927428,0.973447578406546,2.13862664085664,4.85187185379363,0.505445516867349,0.420883711772948,1.30120442962704,0.919608417733892,0.540186389416048,0.753524089178575,1.42876648217788,0.640568601424249,0.655912071918102,0.776110112217047,3.01795190105979,0.945530400839096,1.40760899331159,1.31517439456545,0.556094498451196,1.39300866608867,1.02891068203972,0.995171334092466,2.1066395619397,0,0.852490498186778,2.48550927042602,1.40715635988658,0.900310307305074,2.13070262026689,1.37734962223183,0.925602677324269,2.09280550275367,2.68273401399619,1.40118410840603,1.81015834904829,1.14917224855367,2.75633952455909,6.14039947186396,7.68425403518677,13.2864354572768,0.841159794256509,1.9551876352064,0,0,2.34617075588757,1.16118335930219,0.38660238396628,0.80673409849337,0.444756087689741,0.190225626112559,0,0.658795818896044,0.251335208800269,0.198956472041151,0.38992817423824,0,0.216138049874694,0,1.89667900953082,1.71372768914593,3.38123207019241,1.22190796707189,1.55161989734101,1.61312385747733,0.379419222745544,0,0.470996183524124,0.246794327843601,0,0.333690211432188,0,0,0.202860121388503,0,0.25462585178142,0,0.972811360650212,0,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,0.923765950833023,0.947457058852424,0.651859905768103,0.509235257325564,0.469380496577004,0.167506257441816,0.714130922658041,0.195133647857799,0.472905432318573,0.44292937929755,0.159454768657487,0.327726629431476,0,0.289298117163023,0,0.54390568381871,0.491764273019036,0,0.80275294993896,1.05490517932983,0.163934945376675,7.57412781613119,1.57754109708128,1.95219372148319,5.81643173878557,5.9742199488138,14.9275111635204,13.3045969470751,4.04810701674894,5.84511715822624,5.53402889125133,0,0.99358059645788,1.95872164033981,2.11753047159649,2.14461159864296,0,1.69946445308487,1.209294227859,0.754420319023592,0.885905678642318,0.614870295887855,0.258428293168221,0.727067458955011,1.42598951353889,0,1.05418608574999,0,0.340439605753788,1.08036656418786,1.94038025674132,2.14337035031592,0.354680467284547,0.891844088010353,0.822745103010605,1.522324745573,0.938686832254841,3.38931313382112,0.220528398054962,1.48397627647332,1.29171541356724,0.904693873922338,1.79058516004705,1.64140899745061,0,1.48340241608408,0.170870880797853,0.412773735926445,0.740778109478847,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,1.10717597753397,1.01659733563424,0.324016022465404,1.04544148007234,0.218362563746178,0.539457385539283,0.495920734352016,0,0,0,0,2.24274819065968,2.64733584731356,3.88902376688095,3.22899558694328,2.87225413334323,1.99507305697782,0.911430693907651,0,0,0.288030006257865,0.632022241256357,1.82452693761148,2.36235201479103,1.29920822977795,0.179026695667481,0.596044064343795,0.120195449519969,0.14768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| ||
|EntrezGene=14733 | |||
|HGNC= | |||
|MCL_coexpression_id=1431 | |||
|UniProt=Q3U379,Q9QZF2 | |||
|association_with_transcript=44bp_to_NM_016696,uc007cbs.1_5end | |||
|description=CAGE_peak_7_at_Gpc1_5end | |||
|id=chr1:94728307..94728326,+ | |||
|ontology_enrichment_celltype=CL:0000221!8.56e-10!44;CL:0000133!8.56e-10!44;CL:0002319!2.49e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,2.17e-09,44;CL:0000133,2.17e-09,44;CL:0002319,7.39e-09,43;CL:0000107,1.95e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.33e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,3.44e-09,11;UBERON:0002410,1.95e-07,9 | |||
|phase1_expression=1.92178616525753,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0.0992909512008853,0,0.47997726838022,0.91763712426868,0.57423196411502,0.430761996159075,0,0,0,0.221730510655305,0,0,0,0,0,0,1.25559489221072,0.7813353445238,0,0,0.683045484958446,0,0.251793635951155,0.506884656097573,0.367093504323363,0.782391344348039,0.872100625521786,3.73466510648602,2.91644848611425,1.25987779462826,4.31257693094915,0,0,0,0,0,0,1.41621522601718,0.528990979272033,0.633831403506179,1.0165335962074,1.77858959222228,3.5995988691256,4.94433181283487,2.1314403448383,5.69240209984969,5.37905627450176,1.76272340924412,2.02508907497536,1.47227472945967,1.14260393761521,1.32521124570968,2.57230678351403,2.39613677545591,1.83843757322004,2.20231761998777,1.53224805702225,1.53606533256243,0.659431438650969,0.457438218012048,0,1.67509799400829,0.56276261003168,0.45839474333043,0.589257170947335,1.28134512719193,0.745597783301202,21.7334174866238,18.8928900266964,0.289864488701678,0,0.679971333707751,0,0,0.896053774194671,1.82577746171277,1.36344258062446,1.29893002301434,1.06001872353102,3.38024207464033,0,0,7.11066703153331,2.81438353314578,2.78695852022608,2.52762222507392,0.11418387971906,0,0.29688427812965,0.693941307064543,0.608930956624282,0.691846491768175,0.60289056221049,0.940709657085638,0,0.741584903203122,0.144599356919912,2.65383165584962,6.63244084784378,4.85851340612866,2.90925151881133,1.86391761218122,0,0.41889341362691,0,0.239630249011841,0,0.381210681219194,0.599162557619291,1.37250180845588,0.376963056338593,0.695297280769106,0.511430914660661,2.70124457927428,0.973447578406546,2.13862664085664,4.85187185379363,0.505445516867349,0.420883711772948,1.30120442962704,0.919608417733892,0.540186389416048,0.753524089178575,1.42876648217788,0.640568601424249,0.655912071918102,0.776110112217047,3.01795190105979,0.945530400839096,1.40760899331159,1.31517439456545,0.556094498451196,1.39300866608867,1.02891068203972,0.995171334092466,2.1066395619397,0,0.852490498186778,2.48550927042602,1.40715635988658,0.900310307305074,2.13070262026689,1.37734962223183,0.925602677324269,2.09280550275367,2.68273401399619,1.40118410840603,1.81015834904829,1.14917224855367,2.75633952455909,6.14039947186396,7.68425403518677,13.2864354572768,0.841159794256509,1.9551876352064,0,0,2.34617075588757,1.16118335930219,0.38660238396628,0.80673409849337,0.444756087689741,0.190225626112559,0,0.658795818896044,0.251335208800269,0.198956472041151,0.38992817423824,0,0.216138049874694,0,1.89667900953082,1.71372768914593,3.38123207019241,1.22190796707189,1.55161989734101,1.61312385747733,0.379419222745544,0,0.470996183524124,0.246794327843601,0,0.333690211432188,0,0,0.202860121388503,0,0.25462585178142,0,0.972811360650212,0,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,0.923765950833023,0.947457058852424,0.651859905768103,0.509235257325564,0.469380496577004,0.167506257441816,0.714130922658041,0.195133647857799,0.472905432318573,0.44292937929755,0.159454768657487,0.327726629431476,0,0.289298117163023,0,0.54390568381871,0.491764273019036,0,0.80275294993896,1.05490517932983,0.163934945376675,7.57412781613119,1.57754109708128,1.95219372148319,5.81643173878557,5.9742199488138,14.9275111635204,13.3045969470751,4.04810701674894,5.84511715822624,5.53402889125133,0,0.99358059645788,1.95872164033981,2.11753047159649,2.14461159864296,0,1.69946445308487,1.209294227859,0.754420319023592,0.885905678642318,0.614870295887855,0.258428293168221,0.727067458955011,1.42598951353889,0,1.05418608574999,0,0.340439605753788,1.08036656418786,1.94038025674132,2.14337035031592,0.354680467284547,0.891844088010353,0.822745103010605,1.522324745573,0.938686832254841,3.38931313382112,0.220528398054962,1.48397627647332,1.29171541356724,0.904693873922338,1.79058516004705,1.64140899745061,0,1.48340241608408,0.170870880797853,0.412773735926445,0.740778109478847,0.188368457004691,0.136694227721025,0.228778173206523,0,0,0,0,1.10717597753397,1.01659733563424,0.324016022465404,1.04544148007234,0.218362563746178,0.539457385539283,0.495920734352016,0,0,0,0,2.24274819065968,2.64733584731356,3.88902376688095,3.22899558694328,2.87225413334323,1.99507305697782,0.911430693907651,0,0,0.288030006257865,0.632022241256357,1.82452693761148,2.36235201479103,1.29920822977795,0.179026695667481,0.596044064343795,0.120195449519969,0.147689527174577,0.201932899896295,0.381034033274999,0.201652370273681,0.584747284438515,0.0962118416403295,0.584384510907845,4.30787728868902,1.10992976687032,0.269141569828427,1.67884616364078,0,1.12609485270709,1.46521299413812,0.428736758158132,1.00314420807073,0,0.460325236507177,0,0.343706364687375,0.685082519770642,0,0.675022500231806,0.45032120322422,0.453142408984205,0,0.726511433089237,1.99512436700516,1.87806966329548,0.972426868273176,0.419226325255965,0.551530525350042,2.00022055021454,0.824140228955577,0.320919209591815,1.26348605881899,1.77435509923168,1.69763707247469,1.591905626988,1.21647789569252,2.06767688240208,1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| |||
|short_description=p7@Gpc1 | |||
}} | |||
Revision as of 21:18, 13 September 2013
| Short description: | p7@Gpc1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_7_at_Gpc1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1431 |
| Association with transcript: | 44bp_to_NM_016696, uc007cbs.1_5end |
| EntrezGene: | Gpc1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| ectodermal cell | 2.17e-09 | 44 |
| neurectodermal cell | 2.17e-09 | 44 |
| neural cell | 7.39e-09 | 43 |
| autonomic neuron | 1.95e-07 | 9 |
| Ontology term | p-value | n |
|---|---|---|
| peripheral nervous system | 3.44e-09 | 11 |
| autonomic nervous system | 1.95e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
