FFCP PHASE1:Mm9::chr4:117507840..117507880,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14664|HGNC=|MCL_coexpression_id=15|UniProt=P28571|association_with_transcript=0bp_to_NM_008135,uc008uiy.1_5end|description=CAGE_peak_2_at_Slc6a9_5end|id=chr4:117507840..117507880,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000945!5.53e-07!16;UBERON:0010039!5.53e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000945,4.00e-07,16;UBERON:0010039,4.00e-07,16|phase1_expression=3.36312578920067,0.348975407639361,0.454999239389536,1.20985684522732,1.50268718983904,2.35030980676646,3.73780224952841,0.129123323441576,0.563154888606667,0.234064526321993,6.33506482434368,4.3874687447435,0,0,18.3210368998615,44.1396082909821,72.7544353253273,0,0.274228867211478,1.27316895539409,0.935476191661768,0.893618560807968,1.30599894569468,1.59992422793407,2.2940928106717,1.72269589234506,2.58457197695445,1.939241094173,2.66032787238923,3.02436155711917,2.66076612786366,15.2407361630311,17.8368788399525,31.6963362030877,0,0.332469290716985,0.408338712524738,0.837063261473815,0,0,0,0,0,1.51076181570693,0.608261587317087,0.734187008646726,1.56478268869608,0.218025156380447,0.878744730937887,0.972149495371417,0.699932108126813,1.43752564364972,0,0,0,2.31533492432352,3.72493471920384,3.09403255366465,1.01158230429799,0.528990979272033,0,0.338844532069132,0,0,0,0,1.79760066311043,3.45796474789399,0.414758449233911,0.540023753326763,0,5.71301968807607,6.40518768759679,0.244981598429908,0.383381884072945,0.919218786610021,8.8092704799511,4.72443150915195,3.22573719838111,1.18697658957174,0.823388792421687,0.52091337055676,7.2587579740359,2.25105044012672,4.73674568108111,4.12480019663135,3.98640706237488,2.60959224155421,1.36307147999731,1.28471652181535,0,1.72084775396277,2.03991400112325,0,1.94932925234301,1.34408066129201,3.23022166303029,1.36344258062446,0.779358013808606,0.35333957451034,3.52108549441701,2.56652954828636,0,0,1.5154372870785,1.52015919285059,0.505524445014783,1.37020655662872,0,2.52351636410202,4.3371331691534,5.78484408793068,3.22861696158482,2.26083960828934,3.88042733547826,1.25666591329675,0.247194967734374,0.578397427679647,7.96149496754887,3.72063754879041,13.6921741445444,13.091631834651,3.72783522436244,3.22058876712702,5.02672096352292,1.53274233125155,0,0,0,6.44099749440738,0.457500602818626,1.13088916901578,2.43354048269187,1.79000820131231,4.36354893575076,4.38051410282946,1.52759045775474,7.46441823660558,3.28539585963777,2.73574412652416,4.29397461776922,2.5289231487682,1.62055916824814,3.61691562805716,5.17077393550092,7.43059577652129,8.52685693493532,5.43277078551933,3.88022387279116,3.9712276835242,1.93546236580344,1.53437012699302,3.05851974148158,1.39300866608867,2.67516777330327,2.58744546864041,0,0.257347907114715,0.284163499395593,3.93538967817454,5.62862543954631,1.2604344302271,3.78791576936336,1.18058539048442,1.69693824176116,1.39520366850245,1.07309360559848,0.233530684734339,0.822799249567402,0.656669856316381,0.648550476366846,0.438599962275997,0.658650345873152,0.536825675041487,1.26173969138476,1.54356918568927,0.991256348951394,1.58670339998127,2.77274725695804,2.32236671860439,2.19074684247559,1.4117846723634,0.667134131534611,0.190225626112559,1.89811624617805,1.97638745668813,0.502670417600539,1.59165177632921,2.33956904542944,1.79763881730844,1.94524244887225,2.58883655230677,1.89667900953082,3.88444942873078,1.1270773567308,1.4255592949172,1.55161989734101,1.47285221769669,1.20149420536089,0.442830443938806,1.41298855057237,1.72756029490521,0.296452627087149,42.545501957604,44.2257739004707,60.4879082315257,65.3209590870979,53.782506624789,40.2308845814643,27.0434369203762,8.2688965655268,8.23684239564244,5.75072826109418,2.97712758134803,0.312037673114561,1.01031551178845,1.4351793081753,0,0.923765950833023,3.41084541186873,1.14075483509418,0.678980343100753,0.704070744865506,1.34005005953453,1.90434912708811,0.390267295715598,1.89162172927429,1.55025282754142,2.07291199254733,0.983179888294428,1.38147985492716,1.44649058581512,0,0,1.96705709207614,1.10374698521893,5.61927064957272,6.09500770279457,1.14754461763673,1.00988370881749,2.2085575359138,0.390438744296638,3.66219776145758,2.38968797952552,2.00518806674155,0,1.21443210502468,1.16902343164525,1.18586333383957,5.46246237917072,1.27746076687442,2.49291845134157,2.76907830901079,1.31976098378028,0,2.6705869977048,1.51161778482376,5.84675747243284,6.496641643377,5.22639751504677,3.6179961043551,2.90826983582004,5.34746067577082,0.948110273807448,1.05418608574999,4.12542172992747,0.340439605753788,2.16073312837572,1.94038025674132,1.50035924522115,1.59606210278046,1.96205699362278,0.658196082408484,1.522324745573,0.23467170806371,0.42366414172764,2.20528398054962,1.81374878235628,1.77610869365496,1.44751019827574,1.90995750405018,1.14898629821543,3.49777003955821,5.7481843623258,18.6249260069659,5.57244543500701,15.3711457716861,43.5131135680836,24.8783494452266,28.3684934776088,0.169978429993855,0.139951452323658,0.276399947608848,4.77335309007557,2.84702394223022,2.64315307264903,2.26811215725783,5.22720740036172,4.80397640241591,5.25970950900801,5.12451425497083,5.49687478166462,3.6292192521702,0,1.12738587736838,4.78452947340732,5.46013018508422,5.05573089694524,5.68303223302017,5.06868376472335,3.75543163666413,2.47388331203505,3.56521771047417,0.483168241652012,1.15212002503146,0,0.608175645870493,0.821687657318618,0.25984164595559,0.358053391334963,0,0,0.443068581523732,0.100966449948148,0,0,0.0974578807397524,0.192423683280659,0.116876902181569,1.81384306892169,0.221985953374065,0,0.167884616364078,2.12508553435409,1.68914227906064,1.64836461840539,2.35805216986972,4.51414893631827,1.6942555278512,0.460325236507177,0.572895513439397,1.20297227640581,2.05524755931193,1.5107877947794,2.02506750069542,1.35096360967266,1.35942722695261,4.14208249401456,0.31136204275253,4.38927360741134,7.5122786531819,14.3432963070293,6.28839487883947,2.75765262675021,2.00022055021454,4.12070114477788,2.24643446714271,3.79045817645696,3.04175159868288,3.77252682772152,2.71560371662659,3.3293079250532,3.38869266838118,3.33405583898152,4.75125736373908,3.6652751888104,3.70877310722976,2.50238164228475,4.80016953339582,4.79184676630211,3.81497903915713,4.65108533223451,3.76437521661322,3.89227196301712,2.56099162021882,1.57841826862706,4.48153575691344,3.36685362994643,4.03359061622192,2.65962102414021,1.22769312950907,3.40861050609125,4.43685205256625,1.99848462350357,3.04111090979031,4.08255002691767,1.72159498861959,4.85301122062934,4.63735671240843|short_description=p2@Slc6a9}} | ||
|EntrezGene=14664 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|UniProt=P28571 | |||
|association_with_transcript=0bp_to_NM_008135,uc008uiy.1_5end | |||
|description=CAGE_peak_2_at_Slc6a9_5end | |||
|id=chr4:117507840..117507880,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000945!5.53e-07!16;UBERON:0010039!5.53e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,4.00e-07,16;UBERON:0010039,4.00e-07,16 | |||
|phase1_expression=3.36312578920067,0.348975407639361,0.454999239389536,1.20985684522732,1.50268718983904,2.35030980676646,3.73780224952841,0.129123323441576,0.563154888606667,0.234064526321993,6.33506482434368,4.3874687447435,0,0,18.3210368998615,44.1396082909821,72.7544353253273,0,0.274228867211478,1.27316895539409,0.935476191661768,0.893618560807968,1.30599894569468,1.59992422793407,2.2940928106717,1.72269589234506,2.58457197695445,1.939241094173,2.66032787238923,3.02436155711917,2.66076612786366,15.2407361630311,17.8368788399525,31.6963362030877,0,0.332469290716985,0.408338712524738,0.837063261473815,0,0,0,0,0,1.51076181570693,0.608261587317087,0.734187008646726,1.56478268869608,0.218025156380447,0.878744730937887,0.972149495371417,0.699932108126813,1.43752564364972,0,0,0,2.31533492432352,3.72493471920384,3.09403255366465,1.01158230429799,0.528990979272033,0,0.338844532069132,0,0,0,0,1.79760066311043,3.45796474789399,0.414758449233911,0.540023753326763,0,5.71301968807607,6.40518768759679,0.244981598429908,0.383381884072945,0.919218786610021,8.8092704799511,4.72443150915195,3.22573719838111,1.18697658957174,0.823388792421687,0.52091337055676,7.2587579740359,2.25105044012672,4.73674568108111,4.12480019663135,3.98640706237488,2.60959224155421,1.36307147999731,1.28471652181535,0,1.72084775396277,2.03991400112325,0,1.94932925234301,1.34408066129201,3.23022166303029,1.36344258062446,0.779358013808606,0.35333957451034,3.52108549441701,2.56652954828636,0,0,1.5154372870785,1.52015919285059,0.505524445014783,1.37020655662872,0,2.52351636410202,4.3371331691534,5.78484408793068,3.22861696158482,2.26083960828934,3.88042733547826,1.25666591329675,0.247194967734374,0.578397427679647,7.96149496754887,3.72063754879041,13.6921741445444,13.091631834651,3.72783522436244,3.22058876712702,5.02672096352292,1.53274233125155,0,0,0,6.44099749440738,0.457500602818626,1.13088916901578,2.43354048269187,1.79000820131231,4.36354893575076,4.38051410282946,1.52759045775474,7.46441823660558,3.28539585963777,2.73574412652416,4.29397461776922,2.5289231487682,1.62055916824814,3.61691562805716,5.17077393550092,7.43059577652129,8.52685693493532,5.43277078551933,3.88022387279116,3.9712276835242,1.93546236580344,1.53437012699302,3.05851974148158,1.39300866608867,2.67516777330327,2.58744546864041,0,0.257347907114715,0.284163499395593,3.93538967817454,5.62862543954631,1.2604344302271,3.78791576936336,1.18058539048442,1.69693824176116,1.39520366850245,1.07309360559848,0.233530684734339,0.822799249567402,0.656669856316381,0.648550476366846,0.438599962275997,0.658650345873152,0.536825675041487,1.26173969138476,1.54356918568927,0.991256348951394,1.58670339998127,2.77274725695804,2.32236671860439,2.19074684247559,1.4117846723634,0.667134131534611,0.190225626112559,1.89811624617805,1.97638745668813,0.502670417600539,1.59165177632921,2.33956904542944,1.79763881730844,1.94524244887225,2.58883655230677,1.89667900953082,3.88444942873078,1.1270773567308,1.4255592949172,1.55161989734101,1.47285221769669,1.20149420536089,0.442830443938806,1.41298855057237,1.72756029490521,0.296452627087149,42.545501957604,44.2257739004707,60.4879082315257,65.3209590870979,53.782506624789,40.2308845814643,27.0434369203762,8.2688965655268,8.23684239564244,5.75072826109418,2.97712758134803,0.312037673114561,1.01031551178845,1.4351793081753,0,0.923765950833023,3.41084541186873,1.14075483509418,0.678980343100753,0.704070744865506,1.34005005953453,1.90434912708811,0.390267295715598,1.89162172927429,1.55025282754142,2.07291199254733,0.983179888294428,1.38147985492716,1.44649058581512,0,0,1.96705709207614,1.10374698521893,5.61927064957272,6.09500770279457,1.14754461763673,1.00988370881749,2.2085575359138,0.390438744296638,3.66219776145758,2.38968797952552,2.00518806674155,0,1.21443210502468,1.16902343164525,1.18586333383957,5.46246237917072,1.27746076687442,2.49291845134157,2.76907830901079,1.31976098378028,0,2.6705869977048,1.51161778482376,5.84675747243284,6.496641643377,5.22639751504677,3.6179961043551,2.90826983582004,5.34746067577082,0.948110273807448,1.05418608574999,4.12542172992747,0.340439605753788,2.16073312837572,1.94038025674132,1.50035924522115,1.59606210278046,1.96205699362278,0.658196082408484,1.522324745573,0.23467170806371,0.42366414172764,2.20528398054962,1.81374878235628,1.77610869365496,1.44751019827574,1.90995750405018,1.14898629821543,3.49777003955821,5.7481843623258,18.6249260069659,5.57244543500701,15.3711457716861,43.5131135680836,24.8783494452266,28.3684934776088,0.169978429993855,0.139951452323658,0.276399947608848,4.77335309007557,2.84702394223022,2.64315307264903,2.26811215725783,5.22720740036172,4.80397640241591,5.25970950900801,5.12451425497083,5.49687478166462,3.6292192521702,0,1.12738587736838,4.78452947340732,5.46013018508422,5.05573089694524,5.68303223302017,5.06868376472335,3.75543163666413,2.47388331203505,3.56521771047417,0.483168241652012,1.15212002503146,0,0.608175645870493,0.821687657318618,0.25984164595559,0.358053391334963,0,0,0.443068581523732,0.100966449948148,0,0,0.0974578807397524,0.192423683280659,0.116876902181569,1.81384306892169,0.221985953374065,0,0.167884616364078,2.12508553435409,1.68914227906064,1.64836461840539,2.35805216986972,4.51414893631827,1.6942555278512,0.460325236507177,0.572895513439397,1.20297227640581,2.05524755931193,1.5107877947794,2.02506750069542,1.35096360967266,1.35942722695261,4.14208249401456,0.31136204275253,4.38927360741134,7.5122786531819,14.3432963070293,6.28839487883947,2.75765262675021,2.00022055021454,4.12070114477788,2.24643446714271,3.79045817645696,3.04175159868288,3.77252682772152,2.71560371662659,3.3293079250532,3.38869266838118,3.33405583898152,4.75125736373908,3.6652751888104,3.70877310722976,2.50238164228475,4.80016953339582,4.79184676630211,3.81497903915713,4.65108533223451,3.76437521661322,3.89227196301712,2.56099162021882,1.57841826862706,4.48153575691344,3.36685362994643,4.03359061622192,2.65962102414021,1.22769312950907,3.40861050609125,4.43685205256625,1.99848462350357,3.04111090979031,4.08255002691767,1.72159498861959,4.85301122062934,4.63735671240843 | |||
|short_description=p2@Slc6a9 | |||
}} | |||
Revision as of 03:34, 14 September 2013
| Short description: | p2@Slc6a9 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_2_at_Slc6a9_5end |
| Coexpression cluster: | MCL_coexpression_mm9:15 |
| Association with transcript: | 0bp_to_NM_008135, uc008uiy.1_5end |
| EntrezGene: | Slc6a9 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| stomach | 4.00e-07 | 16 |
| food storage organ | 4.00e-07 | 16 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
