FFCP PHASE1:Mm9::chr4:120339219..120339228,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=56222|HGNC=|MCL_coexpression_id=157|UniProt=Q9WUL8,A2A7E7|association_with_transcript=51bp_to_ENSMUST00000094814,NM_019563,uc008unl.1_5end|description=CAGE_peak_2_at_Cited4_5end|id=chr4:120339219..120339228,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0003100,2.06e-08,11;UBERON:0002365,1.02e-07,25;UBERON:0002330,1.02e-07,25;UBERON:0007023,3.46e-07,51;UBERON:0001911,4.56e-07,2;UBERON:0000076,4.56e-07,2;UBERON:0005333,4.56e-07,2;UBERON:0008425,4.56e-07,2;UBERON:0005311,4.56e-07,2;UBERON:0004175,7.42e-07,9|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0.129123323441576,0.140788722151667,0.234064526321993,0,0.0797721589953364,0,0,0.333109761815663,0.809901069559304,0.699561878128147,0,0,0,0.595303031057488,0.496454756004426,0,0,0,0,0,0,0,0,0,5.08024538767705,2.46025915033828,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.599200221036809,0,0,0,0,0,0.441737081903227,0,0,0,0,0,0.153606533256243,0,0,0,0.558365998002762,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.422530259330042,0,0,0,0,0,0,1.02765491747154,0,0.148442139064825,0.346970653532272,0,0.461230994512117,0.301445281105245,0.23517741427141,0.376999773989026,0,0,1.76922110389975,0.161766849947409,0.220841518460394,0.969750506270444,3.72783522436244,0,0.209446706813455,0.255457055208591,0,0,0.127070227073065,0,0.457500602818626,0.125654352112864,0.173824320192276,0.255715457330331,0,0,0.101839363850316,0.622034853050465,3.0326731012041,0.420883711772948,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0.512454881139399,0.468508622798644,0.258703370739016,0.431135985865684,0,0,0,0.556094498451196,0.348252166522167,0.61734640922383,0,0,0,0,1.03562886267751,0.938104239924385,0.180062061461015,0.473489471170421,0.393528463494808,1.07986979021165,0.232533944750408,0.536546802799238,0.817357396570186,0.493679549740441,0.985004784474571,0.972825714550269,1.02339991197733,2.19550115291051,0.536825675041487,0,0,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0.199141273254367,0.569003702859245,0,2.25415471346161,0,0.193952487167626,0.49095073923223,0,0.147610147979602,0,0.246794327843601,0,8.17541018008861,3.93117990226406,4.27238013531222,2.84004169943904,2.17059443777175,0.50925170356284,2.01387296215567,0,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.35999264132362,25.6621174063401,0,0,0,0.252470927204373,0,0,0,0,0.445597348164788,0,0,0,0,0,2.2710413633323,0.534196811001766,0.325773918707152,0.824850614862677,1.32745138339963,0.485561272309963,0,1.50884063804718,1.47650946440386,0.922305443831782,0,0.727067458955011,1.06949213515416,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,1.31909002353184,0.645857706783622,0.904693873922338,2.02932984805332,2.9545361954111,0,0,0.683483523191411,0.206386867963223,0.740778109478847,0.565105371014073,0.820165366326151,0.228778173206523,0,0,0.138199973804424,0.954670618015114,0.316335993581135,0,0.108005340821801,0,0.436725127492355,0.134864346384821,0.495920734352016,2.6175594198403,0.129614973291793,4.97071450469541,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.209718688851422,0.241584120826006,0,0.316011120628178,0,0,0.129920822977795,0.537080087002444,0,0.120195449519969,0,0.302899349844443,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,1.58711268530648,0.221985953374065,0.179427713218951,0.335769232728157,0.19318959403219,2.064507229963,1.83151624267265,1.50057865355346,1.00314420807073,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0.103787347584177,0.399024873401031,0.682934423016537,0,0.628839487883947,0,0.44449345560323,0.824140228955577,0.320919209591815,0,0.25347929989024,0.377252682772152,0.280924522409647,0.384150914429216,0.287177344778066,0,0.463537303779422,0,0.412085900803307,0.735994600671987,0.342869252385415,0,0.238436189947321,0.290692833264657,0.376437521661322,0.507687647350059,0,0,0.271608227691724,0,0.474540072496697,0.197008964751127,0,0.464810523557898,0.771626443924566,0.999242311751784,0,0.644613162144895,0,0.441182838239031,0.231867835620421|short_description=p2@Cited4}} | ||
|EntrezGene=56222 | |||
|HGNC= | |||
|MCL_coexpression_id=157 | |||
|UniProt=Q9WUL8,A2A7E7 | |||
|association_with_transcript=51bp_to_ENSMUST00000094814,NM_019563,uc008unl.1_5end | |||
|description=CAGE_peak_2_at_Cited4_5end | |||
|id=chr4:120339219..120339228,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003100,2.06e-08,11;UBERON:0002365,1.02e-07,25;UBERON:0002330,1.02e-07,25;UBERON:0007023,3.46e-07,51;UBERON:0001911,4.56e-07,2;UBERON:0000076,4.56e-07,2;UBERON:0005333,4.56e-07,2;UBERON:0008425,4.56e-07,2;UBERON:0005311,4.56e-07,2;UBERON:0004175,7.42e-07,9 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0.129123323441576,0.140788722151667,0.234064526321993,0,0.0797721589953364,0,0,0.333109761815663,0.809901069559304,0.699561878128147,0,0,0,0.595303031057488,0.496454756004426,0,0,0,0,0,0,0,0,0,5.08024538767705,2.46025915033828,0,0.288851619751275,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0.599200221036809,0,0,0,0,0,0.441737081903227,0,0,0,0,0,0.153606533256243,0,0,0,0.558365998002762,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.422530259330042,0,0,0,0,0,0,1.02765491747154,0,0.148442139064825,0.346970653532272,0,0.461230994512117,0.301445281105245,0.23517741427141,0.376999773989026,0,0,1.76922110389975,0.161766849947409,0.220841518460394,0.969750506270444,3.72783522436244,0,0.209446706813455,0.255457055208591,0,0,0.127070227073065,0,0.457500602818626,0.125654352112864,0.173824320192276,0.255715457330331,0,0,0.101839363850316,0.622034853050465,3.0326731012041,0.420883711772948,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0.512454881139399,0.468508622798644,0.258703370739016,0.431135985865684,0,0,0,0.556094498451196,0.348252166522167,0.61734640922383,0,0,0,0,1.03562886267751,0.938104239924385,0.180062061461015,0.473489471170421,0.393528463494808,1.07986979021165,0.232533944750408,0.536546802799238,0.817357396570186,0.493679549740441,0.985004784474571,0.972825714550269,1.02339991197733,2.19550115291051,0.536825675041487,0,0,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0,0,0,0,0,0,0.199141273254367,0.569003702859245,0,2.25415471346161,0,0.193952487167626,0.49095073923223,0,0.147610147979602,0,0.246794327843601,0,8.17541018008861,3.93117990226406,4.27238013531222,2.84004169943904,2.17059443777175,0.50925170356284,2.01387296215567,0,0.274561413188081,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.35999264132362,25.6621174063401,0,0,0,0.252470927204373,0,0,0,0,0.445597348164788,0,0,0,0,0,2.2710413633323,0.534196811001766,0.325773918707152,0.824850614862677,1.32745138339963,0.485561272309963,0,1.50884063804718,1.47650946440386,0.922305443831782,0,0.727067458955011,1.06949213515416,0.316036757935816,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0,1.31909002353184,0.645857706783622,0.904693873922338,2.02932984805332,2.9545361954111,0,0,0.683483523191411,0.206386867963223,0.740778109478847,0.565105371014073,0.820165366326151,0.228778173206523,0,0,0.138199973804424,0.954670618015114,0.316335993581135,0,0.108005340821801,0,0.436725127492355,0.134864346384821,0.495920734352016,2.6175594198403,0.129614973291793,4.97071450469541,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0.209718688851422,0.241584120826006,0,0.316011120628178,0,0,0.129920822977795,0.537080087002444,0,0.120195449519969,0,0.302899349844443,0.0762068066549998,0.100826185136841,0.0974578807397524,0,0,1.58711268530648,0.221985953374065,0.179427713218951,0.335769232728157,0.19318959403219,2.064507229963,1.83151624267265,1.50057865355346,1.00314420807073,0.564751842617067,0.460325236507177,0,0.343706364687375,0,0,0.675022500231806,0,0.453142408984205,0.51776031175182,0.103787347584177,0.399024873401031,0.682934423016537,0,0.628839487883947,0,0.44449345560323,0.824140228955577,0.320919209591815,0,0.25347929989024,0.377252682772152,0.280924522409647,0.384150914429216,0.287177344778066,0,0.463537303779422,0,0.412085900803307,0.735994600671987,0.342869252385415,0,0.238436189947321,0.290692833264657,0.376437521661322,0.507687647350059,0,0,0.271608227691724,0,0.474540072496697,0.197008964751127,0,0.464810523557898,0.771626443924566,0.999242311751784,0,0.644613162144895,0,0.441182838239031,0.231867835620421 | |||
|short_description=p2@Cited4 | |||
}} |
Revision as of 03:39, 14 September 2013
Short description: | p2@Cited4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Cited4_5end |
Coexpression cluster: | MCL_coexpression_mm9:157 |
Association with transcript: | 51bp_to_ENSMUST00000094814, NM_019563, uc008unl.1_5end |
EntrezGene: | Cited4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
female organism | 2.06e-08 | 11 |
exocrine gland | 1.02e-07 | 25 |
exocrine system | 1.02e-07 | 25 |
adult organism | 3.46e-07 | 51 |
mammary gland | 4.56e-07 | 2 |
external ectoderm | 4.56e-07 | 2 |
mammary bud | 4.56e-07 | 2 |
mammary ridge | 4.56e-07 | 2 |
mammary placode | 4.56e-07 | 2 |
internal genitalia | 7.42e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.