FFCP PHASE1:Mm9::chr4:132089484..132089567,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=11983|HGNC=|UniProt=|association_with_transcript=0bp_to_ENSMUST00000145795_5end|description=CAGE_peak_1_at_Atpif1_5end|id=chr4:132089484..132089567,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!1.96e-12!59;UBERON:0000160!1.40e-09!43;UBERON:0000344!4.97e-09!15;UBERON:0004923!2.87e-08!24;UBERON:0001242!5.40e-08!13;UBERON:0000060!5.40e-08!13;UBERON:0001262!5.40e-08!13;UBERON:0004786!5.40e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.75e-15,47;UBERON:0000160,3.97e-13,31;UBERON:0000344,4.97e-09,15;UBERON:0004923,2.87e-08,24;UBERON:0001242,5.40e-08,13;UBERON:0001262,5.40e-08,13;UBERON:0004786,5.40e-08,13|phase1_expression=536.49863780106,1453.83154822558,1260.34789310901,2104.84844648423,1657.46397039246,801.28776483545,860.862580594512,99.94145234378,21.540674489205,22.9383235795554,41.6059662787977,32.9459016650739,40.0609708039021,33.656854931314,1087.27026256632,1558.65460836688,2039.92243662168,135.9641932694,135.057717101653,210.497267291823,596.068420668848,415.234757922102,463.62962572161,1326.65716980293,1105.52332546269,1734.75476359148,1619.66510555812,1268.04820435646,1760.5669812633,1263.17501035677,1050.55915948483,427.375643238332,385.030557027941,301.115193929334,1155.9841822446,1192.56734580182,1143.144225713,348.636848403844,553.185423922851,501.012222982925,284.11580871898,331.960105689805,334.516633238465,344.831384435106,321.060741172203,389.302661334927,716.670471422804,490.992652168766,428.168370149486,412.191386037481,468.674539601714,468.633359829807,97.3139115134871,40.6202799526353,61.1690714439284,374.055219996267,357.020666163691,456.369801665536,834.7577175067,990.271113197246,823.346993154527,696.325513402066,539.801941239462,571.886270332329,513.22164217226,519.360964025599,592.309418494886,603.222739354841,535.971606022521,683.400059835018,608.049463266845,916.082706982998,980.656321825164,768.017311077762,740.118727202821,773.062999539028,430.55309470761,538.968254057577,583.704826373725,863.195753194119,938.297272786313,905.347438027649,766.636515257792,590.337977923232,552.824060456499,612.827457785229,779.912067417486,781.945675237136,265.723212406143,384.281383143004,407.839335603261,154.87629785665,66.6371907033596,84.7334010871373,88.369592772883,78.8527321291311,439.31014617212,459.991440638178,416.696751383002,378.426684300574,418.727486996071,338.781900373799,438.265012295431,362.644018608199,434.497519309507,422.097535881514,416.046618247167,618.077340919272,191.35509601526,318.259946154984,652.998769947735,816.576412833163,620.355687618797,656.095654325566,504.455553612174,301.474152599891,376.725130827186,116.547081677449,917.34114237202,394.225813321836,548.128648818697,704.523742805478,1041.9299452093,369.196585031561,346.843746483082,1225.68295089082,789.222225120497,1181.80838005701,884.154639974384,596.915698028218,683.048400008209,893.025480466127,777.34235989986,795.530787754658,672.402112194736,672.490035415855,440.149730561067,537.189299094382,618.159867128768,160.777577897266,480.79503674719,538.890532792061,539.286078767021,480.597664078095,304.395297203041,408.170312827531,323.645756629303,258.185963997538,482.010032197835,445.72303095555,412.60538616446,438.829856320005,449.324354748566,370.540305179585,456.836342825634,561.674700961788,1407.93744056304,1070.56729359721,678.29827305728,730.532599732715,971.875992561663,950.007436268314,848.256387601808,1131.78786101107,1191.40491282922,1218.01280260264,1047.60763246551,1168.12048504116,925.484595913414,1069.87936340346,702.623372333932,744.888935932068,674.677504289399,649.559066800199,654.842899828692,866.148122396437,1311.10173087971,1141.89754685318,620.455520806996,596.151536665746,624.105115182898,842.835449400948,962.229795716754,1056.70335305527,941.940187165856,846.058530417244,876.154537877739,1010.89783444109,856.282270627176,830.509133596501,1257.70731222085,1130.32586699179,865.075296247006,611.229542462049,520.709738809632,709.113923557384,747.104980569694,599.591124242333,811.388007841345,1269.2996624766,1373.11087370066,1117.11452498406,123.620745495341,1317.74264494571,1249.13241394441,1357.26771035498,1513.53936567962,1237.2388295299,1307.24912304581,1025.92442614959,627.787598072937,687.227217209768,194.087078811929,359.116014500106,275.529265360157,227.068411274453,235.010611713705,159.206362049911,274.912746967908,667.957226490959,581.459035945148,610.233583361801,593.296947673333,463.824826856388,391.343745616607,245.478129005111,445.792187532308,436.506903297735,313.806984717935,261.689713601034,266.452927019077,240.262086303891,431.263072066319,406.297545812576,313.745606186145,362.580884644419,735.482252734075,711.006090868304,588.526453902265,154.007265594668,494.085871605858,577.068464070432,491.380770228514,397.644079793047,395.022049148085,404.79943902803,471.199656749577,457.088161773292,430.863677961711,459.16816116676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| ||
|EntrezGene=11983 | |||
|HGNC= | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000145795_5end | |||
|description=CAGE_peak_1_at_Atpif1_5end | |||
|id=chr4:132089484..132089567,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.96e-12!59;UBERON:0000160!1.40e-09!43;UBERON:0000344!4.97e-09!15;UBERON:0004923!2.87e-08!24;UBERON:0001242!5.40e-08!13;UBERON:0000060!5.40e-08!13;UBERON:0001262!5.40e-08!13;UBERON:0004786!5.40e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.75e-15,47;UBERON:0000160,3.97e-13,31;UBERON:0000344,4.97e-09,15;UBERON:0004923,2.87e-08,24;UBERON:0001242,5.40e-08,13;UBERON:0001262,5.40e-08,13;UBERON:0004786,5.40e-08,13 | |||
|phase1_expression=536.49863780106,1453.83154822558,1260.34789310901,2104.84844648423,1657.46397039246,801.28776483545,860.862580594512,99.94145234378,21.540674489205,22.9383235795554,41.6059662787977,32.9459016650739,40.0609708039021,33.656854931314,1087.27026256632,1558.65460836688,2039.92243662168,135.9641932694,135.057717101653,210.497267291823,596.068420668848,415.234757922102,463.62962572161,1326.65716980293,1105.52332546269,1734.75476359148,1619.66510555812,1268.04820435646,1760.5669812633,1263.17501035677,1050.55915948483,427.375643238332,385.030557027941,301.115193929334,1155.9841822446,1192.56734580182,1143.144225713,348.636848403844,553.185423922851,501.012222982925,284.11580871898,331.960105689805,334.516633238465,344.831384435106,321.060741172203,389.302661334927,716.670471422804,490.992652168766,428.168370149486,412.191386037481,468.674539601714,468.633359829807,97.3139115134871,40.6202799526353,61.1690714439284,374.055219996267,357.020666163691,456.369801665536,834.7577175067,990.271113197246,823.346993154527,696.325513402066,539.801941239462,571.886270332329,513.22164217226,519.360964025599,592.309418494886,603.222739354841,535.971606022521,683.400059835018,608.049463266845,916.082706982998,980.656321825164,768.017311077762,740.118727202821,773.062999539028,430.55309470761,538.968254057577,583.704826373725,863.195753194119,938.297272786313,905.347438027649,766.636515257792,590.337977923232,552.824060456499,612.827457785229,779.912067417486,781.945675237136,265.723212406143,384.281383143004,407.839335603261,154.87629785665,66.6371907033596,84.7334010871373,88.369592772883,78.8527321291311,439.31014617212,459.991440638178,416.696751383002,378.426684300574,418.727486996071,338.781900373799,438.265012295431,362.644018608199,434.497519309507,422.097535881514,416.046618247167,618.077340919272,191.35509601526,318.259946154984,652.998769947735,816.576412833163,620.355687618797,656.095654325566,504.455553612174,301.474152599891,376.725130827186,116.547081677449,917.34114237202,394.225813321836,548.128648818697,704.523742805478,1041.9299452093,369.196585031561,346.843746483082,1225.68295089082,789.222225120497,1181.80838005701,884.154639974384,596.915698028218,683.048400008209,893.025480466127,777.34235989986,795.530787754658,672.402112194736,672.490035415855,440.149730561067,537.189299094382,618.159867128768,160.777577897266,480.79503674719,538.890532792061,539.286078767021,480.597664078095,304.395297203041,408.170312827531,323.645756629303,258.185963997538,482.010032197835,445.72303095555,412.60538616446,438.829856320005,449.324354748566,370.540305179585,456.836342825634,561.674700961788,1407.93744056304,1070.56729359721,678.29827305728,730.532599732715,971.875992561663,950.007436268314,848.256387601808,1131.78786101107,1191.40491282922,1218.01280260264,1047.60763246551,1168.12048504116,925.484595913414,1069.87936340346,702.623372333932,744.888935932068,674.677504289399,649.559066800199,654.842899828692,866.148122396437,1311.10173087971,1141.89754685318,620.455520806996,596.151536665746,624.105115182898,842.835449400948,962.229795716754,1056.70335305527,941.940187165856,846.058530417244,876.154537877739,1010.89783444109,856.282270627176,830.509133596501,1257.70731222085,1130.32586699179,865.075296247006,611.229542462049,520.709738809632,709.113923557384,747.104980569694,599.591124242333,811.388007841345,1269.2996624766,1373.11087370066,1117.11452498406,123.620745495341,1317.74264494571,1249.13241394441,1357.26771035498,1513.53936567962,1237.2388295299,1307.24912304581,1025.92442614959,627.787598072937,687.227217209768,194.087078811929,359.116014500106,275.529265360157,227.068411274453,235.010611713705,159.206362049911,274.912746967908,667.957226490959,581.459035945148,610.233583361801,593.296947673333,463.824826856388,391.343745616607,245.478129005111,445.792187532308,436.506903297735,313.806984717935,261.689713601034,266.452927019077,240.262086303891,431.263072066319,406.297545812576,313.745606186145,362.580884644419,735.482252734075,711.006090868304,588.526453902265,154.007265594668,494.085871605858,577.068464070432,491.380770228514,397.644079793047,395.022049148085,404.79943902803,471.199656749577,457.088161773292,430.863677961711,459.168161166762,458.608415307916,441.246565887458,400.864806969151,363.594151031468,278.764790513922,610.107738657468,562.624139511402,830.239561085463,714.925882664351,705.25622938337,523.575721958816,623.096812324444,616.740464605568,377.031852217428,316.255825724996,323.845605799307,496.360945189023,513.534240177297,636.056648159804,551.489191136287,563.055241814219,506.56744198988,538.568944430742,473.138530924087,363.741147498751,347.404596216665,416.357615527768,624.754012395268,391.066841457483,410.851644610598,327.796456632613,379.822042010072,1020.18292820448,613.757749654787,1123.47604124588,551.672098065694,833.190178636333,1921.16989299084,1586.19981847478,1263.31307244642,499.736584181935,520.199548287037,430.769318348389,1268.75725134209,552.797148783034,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| |||
|short_description=p1@Atpif1 | |||
}} | |||
Revision as of 03:59, 14 September 2013
| Short description: | p1@Atpif1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Atpif1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENSMUST00000145795_5end |
| EntrezGene: | Atpif1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| gastrointestinal system | 1.75e-15 | 47 |
| intestine | 3.97e-13 | 31 |
| mucosa | 4.97e-09 | 15 |
| organ component layer | 2.87e-08 | 24 |
| intestinal mucosa | 5.40e-08 | 13 |
| wall of intestine | 5.40e-08 | 13 |
| gastrointestinal system mucosa | 5.40e-08 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
