FFCP PHASE1:Hg19::chr8:141467818..141467866,-: Difference between revisions
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{{FFCP | 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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=83696 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30832 | |||
|TSSclassifier=S | |||
|UniProt=Q96Q05 | |||
|association_with_transcript=0bp_to_ENST00000389327,ENST00000438773,NM_001160372,uc003yvj.2_5end | |||
|description=CAGE_peak_1_at_TRAPPC9_5end | |||
|id=chr8:141467818..141467866,- | |||
|ontology_enrichment_celltype=CL:0000037!5.01e-12!172;CL:0000566!5.01e-12!172;CL:0000988!1.06e-11!182;CL:0000738!1.01e-10!140;CL:0002032!5.28e-10!165;CL:0000837!5.28e-10!165;CL:0000791!5.20e-07!18;CL:0000789!5.20e-07!18;CL:0002420!5.20e-07!18;CL:0002419!5.20e-07!18;CL:0000790!5.20e-07!18;CL:0002087!9.39e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.45e-07;18!CL:0000789;5.45e-07;18!CL:0002419;5.45e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,8.43e-13,168;CL:0000988,1.87e-12,177;CL:0000738,1.55e-11,136;CL:0002032,1.06e-10,161;CL:0000837,1.06e-10,161;CL:0002087,2.12e-07,115;CL:0000791,5.20e-07,18;CL:0000789,5.20e-07,18;CL:0002420,5.20e-07,18;CL:0002419,5.20e-07,18;CL:0000790,5.20e-07,18;CL:0002031,6.76e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000790;5.45e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.56e-35!115;UBERON:0001049!1.87e-17!57;UBERON:0005068!1.87e-17!57;UBERON:0006241!1.87e-17!57;UBERON:0007135!1.87e-17!57;UBERON:0002616!6.69e-15!59;UBERON:0002780!2.23e-14!41;UBERON:0001890!2.23e-14!41;UBERON:0006240!2.23e-14!41;UBERON:0003080!5.04e-14!42;UBERON:0000955!5.93e-14!69;UBERON:0006238!5.93e-14!69;UBERON:0002346!8.01e-14!90;UBERON:0005743!2.50e-13!86;UBERON:0003075!2.67e-13!86;UBERON:0007284!2.67e-13!86;UBERON:0001017!3.51e-13!82;UBERON:0001893!5.59e-12!34;UBERON:0000073!9.91e-12!94;UBERON:0001016!9.91e-12!94;UBERON:0002791!1.69e-11!33;UBERON:0002020!1.99e-11!34;UBERON:0003528!1.99e-11!34;UBERON:0001869!4.11e-11!32;UBERON:0003056!6.43e-11!61;UBERON:0002619!1.44e-10!22;UBERON:0001950!2.91e-10!20;UBERON:0000956!1.76e-09!25;UBERON:0000203!1.76e-09!25;UBERON:0000153!2.19e-08!129;UBERON:0007811!2.19e-08!129;UBERON:0000033!5.39e-07!123 | |||
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| |||
|short_description=p1@TRAPPC9 | |||
}} |
Revision as of 03:59, 14 September 2013
Short description: | p1@TRAPPC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TRAPPC9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000389327, ENST00000438773, NM_001160372, uc003yvj.2_5end |
EntrezGene: | TRAPPC9 |
HGNC: | 30832 |
UniProt: | Q96Q05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 8.43e-13 | 168 |
hematopoietic cell | 1.87e-12 | 177 |
leukocyte | 1.55e-11 | 136 |
hematopoietic oligopotent progenitor cell | 1.06e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.06e-10 | 161 |
nongranular leukocyte | 2.12e-07 | 115 |
mature alpha-beta T cell | 5.20e-07 | 18 |
alpha-beta T cell | 5.20e-07 | 18 |
immature T cell | 5.20e-07 | 18 |
mature T cell | 5.20e-07 | 18 |
immature alpha-beta T cell | 5.20e-07 | 18 |
hematopoietic lineage restricted progenitor cell | 6.76e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.26e-34 | 114 |
neural tube | 8.76e-18 | 56 |
neural rod | 8.76e-18 | 56 |
future spinal cord | 8.76e-18 | 56 |
neural keel | 8.76e-18 | 56 |
regional part of nervous system | 9.02e-17 | 53 |
regional part of brain | 9.02e-17 | 53 |
regional part of forebrain | 2.23e-14 | 41 |
forebrain | 2.23e-14 | 41 |
anterior neural tube | 2.23e-14 | 41 |
future forebrain | 2.23e-14 | 41 |
neurectoderm | 3.05e-14 | 86 |
brain | 3.57e-14 | 68 |
future brain | 3.57e-14 | 68 |
neural plate | 1.01e-13 | 82 |
presumptive neural plate | 1.01e-13 | 82 |
central nervous system | 2.33e-13 | 81 |
telencephalon | 5.59e-12 | 34 |
nervous system | 1.10e-11 | 89 |
brain grey matter | 1.99e-11 | 34 |
gray matter | 1.99e-11 | 34 |
pre-chordal neural plate | 3.14e-11 | 61 |
cerebral hemisphere | 4.11e-11 | 32 |
regional part of telencephalon | 5.68e-11 | 32 |
regional part of cerebral cortex | 1.44e-10 | 22 |
neocortex | 2.91e-10 | 20 |
cerebral cortex | 1.76e-09 | 25 |
pallium | 1.76e-09 | 25 |
ecto-epithelium | 1.26e-07 | 104 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.