FFCP PHASE1:Mm9::chr4:132194943..132195033,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14050|HGNC=|MCL_coexpression_id=466|UniProt=G5E831,G5E8I5,Q6P4T3,P97480|association_with_transcript=0bp_to_ENSMUST00000020197,ENSMUST00000079157,ENSMUST00000081726,ENSMUST00000127682,ENSMUST00000134868,ENSMUST00000142998,ENSMUST00000145668,ENSMUST00000157029,NM_010166,NM_210071,NM_211357,uc008vbo.1,uc008vbp.1,uc008vbq.1_5end|description=CAGE_peak_1_at_Eya3_5end|id=chr4:132194943..132195033,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001048!3.21e-13!147;UBERON:0000926!8.13e-11!193;UBERON:0004120!8.13e-11!193;UBERON:0006603!8.13e-11!193;UBERON:0003081!4.59e-08!88|ontology_enrichment_uberon_v019_2=UBERON:0001048,5.06e-13,134;UBERON:0000926,4.89e-09,120;UBERON:0004120,4.89e-09,120;UBERON:0006603,4.89e-09,120;UBERON:0000153,9.69e-08,43;UBERON:0000077,1.17e-07,35;UBERON:0003081,1.27e-07,87|phase1_expression=18.8975639583657,19.1936474201649,17.2899710968024,14.8207463540347,19.5349334679075,16.4521686473652,17.5209480446644,35.638037269875,23.5117165993283,21.7680009479454,32.0177600581694,34.142484050004,37.4929598549341,31.9084468829341,15.6561588053361,30.7762406432535,25.1842276126133,30.7575611224282,35.6497527374921,25.4633791078818,31.9762770968022,29.5887034578638,28.7319768052829,24.1588558418044,21.3350631392468,12.0588712464154,13.7843838770904,21.9780657339607,15.771943814879,17.1380488236753,15.0776747245607,20.9560122241678,25.8327210785519,0,19.6419101430867,17.7871070533587,19.3960888449251,23.4377713212668,18.7520482685712,24.6056159667685,21.7645650571475,24.589637458504,31.558172947025,8.68688044031483,9.22530074097583,11.1963518818626,8.60630478782843,9.3750817243592,9.44650585758229,10.304784650937,13.5786828976602,12.9377307928474,22.8184344238521,34.8173828165445,30.5845357219642,14.9210472900849,16.0458726365704,10.3134418455488,16.1853168687678,12.6957835025288,14.5781222806421,9.82649143000483,9.78224275722253,8.09909745553259,9.88866362566974,4.2628806896766,6.5912024314049,6.91592949578798,23.8486108309499,20.2508907497536,13.8814474491912,6.85562362569129,10.6016899656774,22.6607978547665,22.2361492762308,22.0612508786405,6.60695285996332,13.6625451751151,15.9750794586493,14.1118327871307,13.9976094711687,14.0646610050325,13.959149950069,12.380777420697,17.8773949898868,11.1958862479994,10.5355043791336,14.5391567743734,21.3547865199579,23.2760405128899,36.2330610877097,14.6272059086836,14.2793980078628,16.7307989407723,18.8435161059824,18.3691023709908,22.1902183808168,17.724753548118,16.6263042945836,13.4269038313929,10.9857867425811,16.6824420638613,20.3844191765317,7.11066703153331,15.154372870785,14.9482320630308,14.1546844604139,22.7225920640929,67.5827876319118,25.5320479191499,21.685665845767,17.0500667854799,20.2941637585331,17.0316583824463,25.3991607413122,18.598655516792,37.0792451601561,34.5592463038589,31.8459798701955,22.4855921426899,29.1510804367719,26.183263669302,20.5030937339934,27.814175716097,27.6469652993761,22.480220858356,20.0091257924887,13.7977628128484,17.4086211090099,20.9706895166752,23.33253074375,18.4711897605911,23.6401075461496,16.1100738118108,21.8177446787538,19.3067103050632,20.8770695893148,26.4986847399498,22.7450482590307,32.408045806517,31.8795085258624,19.5416788768452,29.3501271582719,29.086029842293,28.3031836469524,29.4661556655155,28.2042190924784,25.6116337031625,44.6225745370983,48.6002626031296,41.348514178528,27.837858018302,30.8632446640414,39.3524948170048,31.6904490068233,29.457071489137,16.1509033082044,15.4408744268829,17.3339734631312,31.0688658803253,30.2538617375614,28.9899918952234,36.6954340157076,28.3340493716262,30.0820870130388,34.6475577678108,31.6562613651551,27.556620798652,30.6081320839074,33.4901626721354,36.8052395338185,33.1873971455504,28.5415149878366,32.2095405024892,18.5055154736432,18.1112117787541,30.0681092515256,23.800550999719,31.3533728286794,36.2289208102284,35.1808169409315,26.6222252502812,23.3496946037114,23.3977520118448,21.353807769503,20.5873693405014,24.8821856712267,19.8956472041151,21.6410136702223,30.5598598942435,27.6656703839609,23.6978115172697,31.6745394591646,31.9895835307241,30.4310886317317,23.4199027022111,29.6747305366467,24.5475369616115,21.8166053078688,26.2746063403692,24.3348028154131,20.4839292110189,21.6410417773619,37.8738389975533,38.3290040470746,35.0784895320372,29.6175777227214,33.7648023653384,25.462585178142,31.6465751195892,20.7533090272045,18.9447375099776,23.0029130443767,18.6070473834252,15.601883655728,15.4073115547738,22.2452792767171,17.3679667690812,31.0385359479896,32.2135400009824,35.3633998879196,31.0633506968594,30.9791127740823,38.0239204392922,29.7554551107517,25.7576415172294,26.4827042098401,25.6899039992579,28.7018583583477,21.3022309130459,26.0754322617502,25.3135852517645,43.729472342389,30.4587182938477,26.0635064700089,31.4567890787395,23.2798355482298,19.5743516608979,13.114795630134,19.4402613947367,20.82354248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| ||
|EntrezGene=14050 | |||
|HGNC= | |||
|MCL_coexpression_id=466 | |||
|UniProt=G5E831,G5E8I5,Q6P4T3,P97480 | |||
|association_with_transcript=0bp_to_ENSMUST00000020197,ENSMUST00000079157,ENSMUST00000081726,ENSMUST00000127682,ENSMUST00000134868,ENSMUST00000142998,ENSMUST00000145668,ENSMUST00000157029,NM_010166,NM_210071,NM_211357,uc008vbo.1,uc008vbp.1,uc008vbq.1_5end | |||
|description=CAGE_peak_1_at_Eya3_5end | |||
|id=chr4:132194943..132195033,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001048!3.21e-13!147;UBERON:0000926!8.13e-11!193;UBERON:0004120!8.13e-11!193;UBERON:0006603!8.13e-11!193;UBERON:0003081!4.59e-08!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001048,5.06e-13,134;UBERON:0000926,4.89e-09,120;UBERON:0004120,4.89e-09,120;UBERON:0006603,4.89e-09,120;UBERON:0000153,9.69e-08,43;UBERON:0000077,1.17e-07,35;UBERON:0003081,1.27e-07,87 | |||
|phase1_expression=18.8975639583657,19.1936474201649,17.2899710968024,14.8207463540347,19.5349334679075,16.4521686473652,17.5209480446644,35.638037269875,23.5117165993283,21.7680009479454,32.0177600581694,34.142484050004,37.4929598549341,31.9084468829341,15.6561588053361,30.7762406432535,25.1842276126133,30.7575611224282,35.6497527374921,25.4633791078818,31.9762770968022,29.5887034578638,28.7319768052829,24.1588558418044,21.3350631392468,12.0588712464154,13.7843838770904,21.9780657339607,15.771943814879,17.1380488236753,15.0776747245607,20.9560122241678,25.8327210785519,0,19.6419101430867,17.7871070533587,19.3960888449251,23.4377713212668,18.7520482685712,24.6056159667685,21.7645650571475,24.589637458504,31.558172947025,8.68688044031483,9.22530074097583,11.1963518818626,8.60630478782843,9.3750817243592,9.44650585758229,10.304784650937,13.5786828976602,12.9377307928474,22.8184344238521,34.8173828165445,30.5845357219642,14.9210472900849,16.0458726365704,10.3134418455488,16.1853168687678,12.6957835025288,14.5781222806421,9.82649143000483,9.78224275722253,8.09909745553259,9.88866362566974,4.2628806896766,6.5912024314049,6.91592949578798,23.8486108309499,20.2508907497536,13.8814474491912,6.85562362569129,10.6016899656774,22.6607978547665,22.2361492762308,22.0612508786405,6.60695285996332,13.6625451751151,15.9750794586493,14.1118327871307,13.9976094711687,14.0646610050325,13.959149950069,12.380777420697,17.8773949898868,11.1958862479994,10.5355043791336,14.5391567743734,21.3547865199579,23.2760405128899,36.2330610877097,14.6272059086836,14.2793980078628,16.7307989407723,18.8435161059824,18.3691023709908,22.1902183808168,17.724753548118,16.6263042945836,13.4269038313929,10.9857867425811,16.6824420638613,20.3844191765317,7.11066703153331,15.154372870785,14.9482320630308,14.1546844604139,22.7225920640929,67.5827876319118,25.5320479191499,21.685665845767,17.0500667854799,20.2941637585331,17.0316583824463,25.3991607413122,18.598655516792,37.0792451601561,34.5592463038589,31.8459798701955,22.4855921426899,29.1510804367719,26.183263669302,20.5030937339934,27.814175716097,27.6469652993761,22.480220858356,20.0091257924887,13.7977628128484,17.4086211090099,20.9706895166752,23.33253074375,18.4711897605911,23.6401075461496,16.1100738118108,21.8177446787538,19.3067103050632,20.8770695893148,26.4986847399498,22.7450482590307,32.408045806517,31.8795085258624,19.5416788768452,29.3501271582719,29.086029842293,28.3031836469524,29.4661556655155,28.2042190924784,25.6116337031625,44.6225745370983,48.6002626031296,41.348514178528,27.837858018302,30.8632446640414,39.3524948170048,31.6904490068233,29.457071489137,16.1509033082044,15.4408744268829,17.3339734631312,31.0688658803253,30.2538617375614,28.9899918952234,36.6954340157076,28.3340493716262,30.0820870130388,34.6475577678108,31.6562613651551,27.556620798652,30.6081320839074,33.4901626721354,36.8052395338185,33.1873971455504,28.5415149878366,32.2095405024892,18.5055154736432,18.1112117787541,30.0681092515256,23.800550999719,31.3533728286794,36.2289208102284,35.1808169409315,26.6222252502812,23.3496946037114,23.3977520118448,21.353807769503,20.5873693405014,24.8821856712267,19.8956472041151,21.6410136702223,30.5598598942435,27.6656703839609,23.6978115172697,31.6745394591646,31.9895835307241,30.4310886317317,23.4199027022111,29.6747305366467,24.5475369616115,21.8166053078688,26.2746063403692,24.3348028154131,20.4839292110189,21.6410417773619,37.8738389975533,38.3290040470746,35.0784895320372,29.6175777227214,33.7648023653384,25.462585178142,31.6465751195892,20.7533090272045,18.9447375099776,23.0029130443767,18.6070473834252,15.601883655728,15.4073115547738,22.2452792767171,17.3679667690812,31.0385359479896,32.2135400009824,35.3633998879196,31.0633506968594,30.9791127740823,38.0239204392922,29.7554551107517,25.7576415172294,26.4827042098401,25.6899039992579,28.7018583583477,21.3022309130459,26.0754322617502,25.3135852517645,43.729472342389,30.4587182938477,26.0635064700089,31.4567890787395,23.2798355482298,19.5743516608979,13.114795630134,19.4402613947367,20.8235424814729,19.1314984705353,22.6194567619439,22.2240982095873,20.2746793414979,21.5138163399513,21.4549671887694,19.2888866221466,22.1361155650053,26.0270266301664,35.7689014724837,24.2169220987467,26.0619134965722,35.6335465620677,38.4960901185892,26.705869977048,21.1626489875326,21.6895841719283,21.2617362874156,23.0576360957946,20.9326917466259,26.9014959813354,26.3808060004694,24.018793603122,27.4088382294997,19.5957532171555,30.9800041235947,28.449652856947,25.6130193889854,25.2917701337279,27.842416681837,25.8634785523002,19.7458824722545,18.8768268451052,31.4460088805372,36.6469482594409,30.6534473296397,39.4078144530137,28.4177390984794,34.3783672090488,25.7844263046775,25.9342621597197,24.7758711135373,23.7344386573452,29.048049735635,28.2750009109615,29.6311243791539,36.5434806589101,40.4614914054235,26.5382680919566,18.8676057293179,13.4353394230712,16.9985967779441,24.821436068393,38.2766552233174,34.970948345818,29.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| |||
|short_description=p1@Eya3 | |||
}} |
Revision as of 03:59, 14 September 2013
Short description: | p1@Eya3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Eya3_5end |
Coexpression cluster: | MCL_coexpression_mm9:466 |
Association with transcript: | 0bp_to_ENSMUST00000020197, ENSMUST00000079157, ENSMUST00000081726, ENSMUST00000127682, ENSMUST00000134868, ENSMUST00000142998, ENSMUST00000145668, ENSMUST00000157029, NM_010166, NM_210071, NM_211357, uc008vbo.1, uc008vbp.1, uc008vbq.1_5end |
EntrezGene: | Eya3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primordium | 5.06e-13 | 134 |
mesoderm | 4.89e-09 | 120 |
mesoderm-derived structure | 4.89e-09 | 120 |
presumptive mesoderm | 4.89e-09 | 120 |
anterior region of body | 9.69e-08 | 43 |
mixed endoderm/mesoderm-derived structure | 1.17e-07 | 35 |
lateral plate mesoderm | 1.27e-07 | 87 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.