FFCP PHASE1:Mm9::chr4:154302654..154302680,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=230979|HGNC=|MCL_coexpression_id=15|UniProt=F6Y2U8|association_with_transcript=0bp_to_ENSMUST00000137803,ENSMUST00000145296,ENSMUST00000152687_5end|description=CAGE_peak_1_at_Tnfrsf14_5end|id=chr4:154302654..154302680,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.54e-07,6;UBERON:0004457,7.54e-07,6;UBERON:0000042,7.54e-07,6;UBERON:0004854,7.54e-07,6;UBERON:0009034,7.54e-07,6;UBERON:0002095,7.54e-07,6;UBERON:0004782,7.54e-07,6;UBERON:0003281,7.54e-07,6;UBERON:0009664,7.54e-07,6;UBERON:0002296,7.54e-07,6;UBERON:0005602,7.54e-07,6;UBERON:0001179,7.54e-07,6;UBERON:0006293,7.54e-07,6|phase1_expression=0,0,0,0.60492842261366,0,0,0,1.29123323441576,0.140788722151667,2.10658073689794,0,0.797721589953364,0.342401459862411,0.786783621770977,198.866527803951,268.887155093689,333.691015867126,1.10411757875383,2.74228867211478,10.1853516431527,0.0850432901510698,0,0,0.639969691173627,0,0,0,0,0.190023419456374,0,0,9.52546010189447,11.6862309641068,0,0.577703239502549,1.16364251750945,1.22501613757421,8.78916424547506,2.3440060335714,2.61761871986899,3.52938892818609,3.41522742479223,1.94204141212461,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,0.285650984403804,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,0,0,0,0.274462930807229,0,0.279182999001381,0,0,0,0.711858403995515,0.931997229126503,0,0,0.579728977403356,0,0,0,0,0,16.0106638950197,0,0,0,0,0,0,0,0,0,0,4.22480354960522,0,0,16.654591369549,14.6143429589828,15.912469310668,6.0289056221049,3.88042733547826,0.125666591329675,0,0.144599356919912,138.88385665613,28.1474318908492,102.912147602543,121.218813283806,0,0,0,0.510914110417183,0.479260498023681,0.599902730993408,0.635351135365324,0,0,0,0.173824320192276,0,0,0,0.509196819251581,72.6536708362943,0,0,1.04096354370163,0.459804208866946,0.180062129805349,6.78171680260718,0.0680364991513279,0,0.187403449119458,0.258703370739016,1.29340795759705,0.567318240503458,0.175951124163949,0.43839146485515,0.278047249225598,0,0.205782136407943,0.796137067273973,0,0.257347907114715,0.568326998791185,6.62802472113606,12.195355119017,1.80062061461015,0.946978942340841,1.77087808572663,0.771335564436891,0.232533944750408,0.536546802799238,0.116765342367169,0,0,0.243206428637567,0.292399974850665,0.878200461164203,0.671032093801859,0,0,0,0.264450566663544,2.77274725695804,6.27039014023184,3.47942145569652,0,0.22237804384487,1.52180500890047,0.474529061544512,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0.432276099749388,0.597423819763102,0.758671603812327,8.91138398355885,0,1.4255592949172,0.387904974335251,0.140271639780637,0.0632365371242573,0.295220295959204,0,0,0,205.720015347944,257.688842593409,303.563851719553,362.916757164032,368.036345782188,291.291974437944,179.810085906757,77.987044078792,94.9982489630762,33.0666875012915,14.1413560114031,0.936113019343682,0.252578877947112,0,0,0,3.7898282354097,2.44447464663039,0.509235257325564,0.469380496577004,0.502518772325447,0.952174563544055,1.56106918286239,0.157635144106191,0,0.159454768657487,0.983179888294428,1.03610989119537,0.144649058581512,0,0,0,0,0,0,0,3.28212205365685,0,0,0,0,0,0,0,0,0,0,0.141940085208269,3.5613120733451,2.11753047159649,0,0,4.37005145078967,3.32555912661226,1.13163047853539,2.65771703592696,0,1.03371317267288,0.727067458955011,0.712994756769443,0,0,5.15677716240934,0,0.900305470156551,0.646793418913773,0.643011105094777,0.177340233642274,0.178368817602071,0.164549020602121,0,1.17335854031855,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0,208.46247457338,25.3855847594764,117.968913934506,351.683909227758,276.532422679634,279.795705831577,0.509935289981566,0.559805809294632,0.138199973804424,0,3.00519193902079,5.28630614529807,2.37611749807963,2.50905955217362,2.40198820120795,3.10187996685088,2.81021749466142,0.26175594198403,0,0,0,2.24274819065968,3.14371131868485,1.36115831840833,1.54991788173277,2.02747350588934,2.46450201156083,1.95306577265925,0,0,0,0,0.810900861160657,1.23253148597793,0.129920822977795,0.179026695667481,0.596044064343795,0,0.147689527174577,0,0.15241361331,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93408612825759,26.3356416444681,36.5369916313847,55.428331491571,44.4379904771322,17.6489768112014,19.3354653187405,22.2517861818006,18.2923949467335,17.1834103999382,20.5318232911094,17.5422497489051,19.8519995836151,15.6221371867881,16.8860278729503,20.0043350338891,16.9191115879489,16.3972837394149,19.3680373377554,20.9022466590844,23.3151091622082,19.8772902898458,16.6905332963125,18.4589949123057,18.4454385614048,16.2460047152019,21.0367168803688,17.8887403777733,17.5187306861162,23.0068331379673,17.0834426098811,18.4203382042304,17.5969348562966,18.43748410113,18.9048478761519,0.249810577937946,14.2698281151699,10.7435527024149,0.765153328275374,18.7502706251588,21.7955765483196|short_description=p1@Tnfrsf14}} | ||
|EntrezGene=230979 | |||
|HGNC= | |||
|MCL_coexpression_id=15 | |||
|UniProt=F6Y2U8 | |||
|association_with_transcript=0bp_to_ENSMUST00000137803,ENSMUST00000145296,ENSMUST00000152687_5end | |||
|description=CAGE_peak_1_at_Tnfrsf14_5end | |||
|id=chr4:154302654..154302680,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.54e-07,6;UBERON:0004457,7.54e-07,6;UBERON:0000042,7.54e-07,6;UBERON:0004854,7.54e-07,6;UBERON:0009034,7.54e-07,6;UBERON:0002095,7.54e-07,6;UBERON:0004782,7.54e-07,6;UBERON:0003281,7.54e-07,6;UBERON:0009664,7.54e-07,6;UBERON:0002296,7.54e-07,6;UBERON:0005602,7.54e-07,6;UBERON:0001179,7.54e-07,6;UBERON:0006293,7.54e-07,6 | |||
|phase1_expression=0,0,0,0.60492842261366,0,0,0,1.29123323441576,0.140788722151667,2.10658073689794,0,0.797721589953364,0.342401459862411,0.786783621770977,198.866527803951,268.887155093689,333.691015867126,1.10411757875383,2.74228867211478,10.1853516431527,0.0850432901510698,0,0,0.639969691173627,0,0,0,0,0.190023419456374,0,0,9.52546010189447,11.6862309641068,0,0.577703239502549,1.16364251750945,1.22501613757421,8.78916424547506,2.3440060335714,2.61761871986899,3.52938892818609,3.41522742479223,1.94204141212461,0,0,0,0,0,0,0,0,0,0,0,0,0.257259436035947,0,0.515672092277442,0.202316460859598,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,0.285650984403804,0.441737081903227,0.244981598429908,0.0958454710182364,0,0,0,0,0,0.274462930807229,0,0.279182999001381,0,0,0,0.711858403995515,0.931997229126503,0,0,0.579728977403356,0,0,0,0,0,16.0106638950197,0,0,0,0,0,0,0,0,0,0,4.22480354960522,0,0,16.654591369549,14.6143429589828,15.912469310668,6.0289056221049,3.88042733547826,0.125666591329675,0,0.144599356919912,138.88385665613,28.1474318908492,102.912147602543,121.218813283806,0,0,0,0.510914110417183,0.479260498023681,0.599902730993408,0.635351135365324,0,0,0,0.173824320192276,0,0,0,0.509196819251581,72.6536708362943,0,0,1.04096354370163,0.459804208866946,0.180062129805349,6.78171680260718,0.0680364991513279,0,0.187403449119458,0.258703370739016,1.29340795759705,0.567318240503458,0.175951124163949,0.43839146485515,0.278047249225598,0,0.205782136407943,0.796137067273973,0,0.257347907114715,0.568326998791185,6.62802472113606,12.195355119017,1.80062061461015,0.946978942340841,1.77087808572663,0.771335564436891,0.232533944750408,0.536546802799238,0.116765342367169,0,0,0.243206428637567,0.292399974850665,0.878200461164203,0.671032093801859,0,0,0,0.264450566663544,2.77274725695804,6.27039014023184,3.47942145569652,0,0.22237804384487,1.52180500890047,0.474529061544512,0,0.502670417600539,0.198956472041151,0.19496408711912,0,0.432276099749388,0.597423819763102,0.758671603812327,8.91138398355885,0,1.4255592949172,0.387904974335251,0.140271639780637,0.0632365371242573,0.295220295959204,0,0,0,205.720015347944,257.688842593409,303.563851719553,362.916757164032,368.036345782188,291.291974437944,179.810085906757,77.987044078792,94.9982489630762,33.0666875012915,14.1413560114031,0.936113019343682,0.252578877947112,0,0,0,3.7898282354097,2.44447464663039,0.509235257325564,0.469380496577004,0.502518772325447,0.952174563544055,1.56106918286239,0.157635144106191,0,0.159454768657487,0.983179888294428,1.03610989119537,0.144649058581512,0,0,0,0,0,0,0,3.28212205365685,0,0,0,0,0,0,0,0,0,0,0.141940085208269,3.5613120733451,2.11753047159649,0,0,4.37005145078967,3.32555912661226,1.13163047853539,2.65771703592696,0,1.03371317267288,0.727067458955011,0.712994756769443,0,0,5.15677716240934,0,0.900305470156551,0.646793418913773,0.643011105094777,0.177340233642274,0.178368817602071,0.164549020602121,0,1.17335854031855,0.21183207086382,0,0,0,0,0,0,0.291480836629851,0,208.46247457338,25.3855847594764,117.968913934506,351.683909227758,276.532422679634,279.795705831577,0.509935289981566,0.559805809294632,0.138199973804424,0,3.00519193902079,5.28630614529807,2.37611749807963,2.50905955217362,2.40198820120795,3.10187996685088,2.81021749466142,0.26175594198403,0,0,0,2.24274819065968,3.14371131868485,1.36115831840833,1.54991788173277,2.02747350588934,2.46450201156083,1.95306577265925,0,0,0,0,0.810900861160657,1.23253148597793,0.129920822977795,0.179026695667481,0.596044064343795,0,0.147689527174577,0,0.15241361331,0.100826185136841,0,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93408612825759,26.3356416444681,36.5369916313847,55.428331491571,44.4379904771322,17.6489768112014,19.3354653187405,22.2517861818006,18.2923949467335,17.1834103999382,20.5318232911094,17.5422497489051,19.8519995836151,15.6221371867881,16.8860278729503,20.0043350338891,16.9191115879489,16.3972837394149,19.3680373377554,20.9022466590844,23.3151091622082,19.8772902898458,16.6905332963125,18.4589949123057,18.4454385614048,16.2460047152019,21.0367168803688,17.8887403777733,17.5187306861162,23.0068331379673,17.0834426098811,18.4203382042304,17.5969348562966,18.43748410113,18.9048478761519,0.249810577937946,14.2698281151699,10.7435527024149,0.765153328275374,18.7502706251588,21.7955765483196 | |||
|short_description=p1@Tnfrsf14 | |||
}} |
Revision as of 04:38, 14 September 2013
Short description: | p1@Tnfrsf14 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tnfrsf14_5end |
Coexpression cluster: | MCL_coexpression_mm9:15 |
Association with transcript: | 0bp_to_ENSMUST00000137803, ENSMUST00000145296, ENSMUST00000152687_5end |
EntrezGene: | Tnfrsf14 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
spleen | 7.54e-07 | 6 |
cavity lining | 7.54e-07 | 6 |
serous membrane | 7.54e-07 | 6 |
gastrointestinal system mesentery | 7.54e-07 | 6 |
stomach region | 7.54e-07 | 6 |
mesentery | 7.54e-07 | 6 |
gastrointestinal system serosa | 7.54e-07 | 6 |
mesentery of stomach | 7.54e-07 | 6 |
gut mesentery | 7.54e-07 | 6 |
dorsal mesentery | 7.54e-07 | 6 |
dorsal mesogastrium | 7.54e-07 | 6 |
peritoneal cavity | 7.54e-07 | 6 |
spleen primordium | 7.54e-07 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.