FFCP PHASE1:Mm9::chr5:137169991..137170004,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=59310|HGNC=|MCL_coexpression_id=50|UniProt=Q62082|association_with_transcript=-42bp_to_NM_001085387,uc009aaw.1_5end|description=CAGE_peak_5_at_Myl10_5end|id=chr5:137169991..137170004,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!4.80e-27!23;UBERON:0000974!4.80e-27!23;UBERON:0004807!4.80e-27!23;UBERON:0005058!4.80e-27!23;UBERON:0003351!4.80e-27!23;UBERON:0009113!4.80e-27!23;UBERON:0003295!4.80e-27!23;UBERON:0009722!4.80e-27!23;UBERON:0005562!4.80e-27!23;UBERON:0007690!4.80e-27!23;UBERON:0006562!8.41e-26!24;UBERON:0003408!8.41e-26!24;UBERON:0001557!8.41e-26!24;UBERON:0001042!8.41e-26!24;UBERON:0008814!8.41e-26!24;UBERON:0009145!8.41e-26!24;UBERON:0004177!5.98e-24!29;UBERON:0000072!1.27e-22!27;UBERON:0000063!8.28e-17!35;UBERON:0002390!2.34e-14!45;UBERON:0003061!2.34e-14!45;UBERON:0000065!6.18e-14!41;UBERON:0001004!1.55e-13!42;UBERON:0002193!2.85e-13!48;UBERON:0005057!2.59e-12!51;UBERON:0003929!1.13e-09!55;UBERON:0000949!4.02e-09!72;UBERON:0002368!1.23e-08!60;UBERON:0002405!3.74e-08!70;UBERON:0002530!9.31e-08!65;UBERON:0000490!1.34e-07!66;UBERON:0001041!1.99e-07!92;UBERON:0005911!3.78e-07!69;UBERON:0000077!7.17e-07!97;UBERON:0003081!8.40e-07!88|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.80e-17,23;UBERON:0000974,4.80e-17,23;UBERON:0004807,4.80e-17,23;UBERON:0005058,4.80e-17,23;UBERON:0003351,4.80e-17,23;UBERON:0009113,4.80e-17,23;UBERON:0003295,4.80e-17,23;UBERON:0009722,4.80e-17,23;UBERON:0005562,4.80e-17,23;UBERON:0007690,4.80e-17,23;UBERON:0006562,2.42e-16,24;UBERON:0003408,2.42e-16,24;UBERON:0001557,2.42e-16,24;UBERON:0001042,2.42e-16,24;UBERON:0008814,2.42e-16,24;UBERON:0009145,2.42e-16,24;UBERON:0000072,1.53e-14,27;UBERON:0004177,1.50e-13,29;UBERON:0005057,1.50e-13,29;UBERON:0000077,3.04e-11,35;UBERON:0007811,6.22e-11,36;UBERON:0000065,1.32e-09,41;UBERON:0001004,2.23e-09,42;UBERON:0000153,3.68e-09,43;UBERON:0002390,9.38e-09,45;UBERON:0003061,9.38e-09,45;UBERON:0002193,3.31e-08,48;UBERON:0002405,3.31e-08,48;UBERON:0003929,3.69e-07,55|phase1_expression=0,0,0,0,0,0,0,0,0.563154888606667,0,0,0,0,0,0,0,0,0,0,0,0,19.1631535817709,16.4555867157529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0.377210159511796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0.339956859987711,0.279902904647316,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,1.26404448251271,0,2.77319584345034,3.24802057444488,1.43221356533985,0.596044064343795,0.841368146639782,0.295379054349154,1.51449674922221,0.685861259894999,0.806609481094724,0.292373642219257,2.11666051608725,0.935015217452552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p5@Myl10}} | ||
|EntrezGene=59310 | |||
|HGNC= | |||
|MCL_coexpression_id=50 | |||
|UniProt=Q62082 | |||
|association_with_transcript=-42bp_to_NM_001085387,uc009aaw.1_5end | |||
|description=CAGE_peak_5_at_Myl10_5end | |||
|id=chr5:137169991..137170004,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.80e-27!23;UBERON:0000974!4.80e-27!23;UBERON:0004807!4.80e-27!23;UBERON:0005058!4.80e-27!23;UBERON:0003351!4.80e-27!23;UBERON:0009113!4.80e-27!23;UBERON:0003295!4.80e-27!23;UBERON:0009722!4.80e-27!23;UBERON:0005562!4.80e-27!23;UBERON:0007690!4.80e-27!23;UBERON:0006562!8.41e-26!24;UBERON:0003408!8.41e-26!24;UBERON:0001557!8.41e-26!24;UBERON:0001042!8.41e-26!24;UBERON:0008814!8.41e-26!24;UBERON:0009145!8.41e-26!24;UBERON:0004177!5.98e-24!29;UBERON:0000072!1.27e-22!27;UBERON:0000063!8.28e-17!35;UBERON:0002390!2.34e-14!45;UBERON:0003061!2.34e-14!45;UBERON:0000065!6.18e-14!41;UBERON:0001004!1.55e-13!42;UBERON:0002193!2.85e-13!48;UBERON:0005057!2.59e-12!51;UBERON:0003929!1.13e-09!55;UBERON:0000949!4.02e-09!72;UBERON:0002368!1.23e-08!60;UBERON:0002405!3.74e-08!70;UBERON:0002530!9.31e-08!65;UBERON:0000490!1.34e-07!66;UBERON:0001041!1.99e-07!92;UBERON:0005911!3.78e-07!69;UBERON:0000077!7.17e-07!97;UBERON:0003081!8.40e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.80e-17,23;UBERON:0000974,4.80e-17,23;UBERON:0004807,4.80e-17,23;UBERON:0005058,4.80e-17,23;UBERON:0003351,4.80e-17,23;UBERON:0009113,4.80e-17,23;UBERON:0003295,4.80e-17,23;UBERON:0009722,4.80e-17,23;UBERON:0005562,4.80e-17,23;UBERON:0007690,4.80e-17,23;UBERON:0006562,2.42e-16,24;UBERON:0003408,2.42e-16,24;UBERON:0001557,2.42e-16,24;UBERON:0001042,2.42e-16,24;UBERON:0008814,2.42e-16,24;UBERON:0009145,2.42e-16,24;UBERON:0000072,1.53e-14,27;UBERON:0004177,1.50e-13,29;UBERON:0005057,1.50e-13,29;UBERON:0000077,3.04e-11,35;UBERON:0007811,6.22e-11,36;UBERON:0000065,1.32e-09,41;UBERON:0001004,2.23e-09,42;UBERON:0000153,3.68e-09,43;UBERON:0002390,9.38e-09,45;UBERON:0003061,9.38e-09,45;UBERON:0002193,3.31e-08,48;UBERON:0002405,3.31e-08,48;UBERON:0003929,3.69e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.563154888606667,0,0,0,0,0,0,0,0,0,0,0,0,19.1631535817709,16.4555867157529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0.377210159511796,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206386867963223,0,0,0,0,0.339956859987711,0.279902904647316,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,1.26404448251271,0,2.77319584345034,3.24802057444488,1.43221356533985,0.596044064343795,0.841368146639782,0.295379054349154,1.51449674922221,0.685861259894999,0.806609481094724,0.292373642219257,2.11666051608725,0.935015217452552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@Myl10 | |||
}} |
Revision as of 06:43, 14 September 2013
Short description: | p5@Myl10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Myl10_5end |
Coexpression cluster: | MCL_coexpression_mm9:50 |
Association with transcript: | -42bp_to_NM_001085387, uc009aaw.1_5end |
EntrezGene: | Myl10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 4.80e-17 | 23 |
neck | 4.80e-17 | 23 |
respiratory system epithelium | 4.80e-17 | 23 |
hemolymphoid system gland | 4.80e-17 | 23 |
pharyngeal epithelium | 4.80e-17 | 23 |
thymic region | 4.80e-17 | 23 |
pharyngeal gland | 4.80e-17 | 23 |
entire pharyngeal arch endoderm | 4.80e-17 | 23 |
thymus primordium | 4.80e-17 | 23 |
early pharyngeal endoderm | 4.80e-17 | 23 |
pharynx | 2.42e-16 | 24 |
gland of gut | 2.42e-16 | 24 |
upper respiratory tract | 2.42e-16 | 24 |
chordate pharynx | 2.42e-16 | 24 |
pharyngeal arch system | 2.42e-16 | 24 |
pharyngeal region of foregut | 2.42e-16 | 24 |
segment of respiratory tract | 1.53e-14 | 27 |
hemopoietic organ | 1.50e-13 | 29 |
immune organ | 1.50e-13 | 29 |
mixed endoderm/mesoderm-derived structure | 3.04e-11 | 35 |
craniocervical region | 6.22e-11 | 36 |
respiratory tract | 1.32e-09 | 41 |
respiratory system | 2.23e-09 | 42 |
anterior region of body | 3.68e-09 | 43 |
hematopoietic system | 9.38e-09 | 45 |
blood island | 9.38e-09 | 45 |
hemolymphoid system | 3.31e-08 | 48 |
immune system | 3.31e-08 | 48 |
gut epithelium | 3.69e-07 | 55 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.