FFCP PHASE1:Mm9::chr5:37442147..37442161,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76071|HGNC=|MCL_coexpression_id=12|UniProt=|association_with_transcript=0bp_to_ENSMUST00000152445_5end|description=CAGE_peak_3_at_Jakmip1_5end|id=chr5:37442147..37442161,+|ontology_enrichment_celltype=CL:0002563!5.79e-08!9;CL:0002251!5.79e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,5.41e-12,9;CL:0002251,5.41e-12,9;CL:0000239,1.24e-08,6;CL:0000677,1.24e-08,6;CL:0000584,1.24e-08,6;CL:0000075,3.35e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!3.62e-17!59;UBERON:0001007!1.69e-12!128;UBERON:0001555!1.69e-12!128;UBERON:0007026!1.69e-12!128;UBERON:0004119!2.90e-12!130;UBERON:0000925!2.90e-12!130;UBERON:0006595!2.90e-12!130;UBERON:0000160!3.81e-12!43;UBERON:0000344!3.93e-12!15;UBERON:0004921!1.62e-11!126;UBERON:0004185!1.62e-11!126;UBERON:0001242!7.41e-11!13;UBERON:0000060!7.41e-11!13;UBERON:0001262!7.41e-11!13;UBERON:0004786!7.41e-11!13;UBERON:0004923!3.60e-09!24;UBERON:0003350!5.79e-08!9;UBERON:0004808!5.79e-08!9;UBERON:0001277!5.79e-08!9|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.07e-34,47;UBERON:0000160,2.52e-30,31;UBERON:0001007,2.66e-21,116;UBERON:0001555,2.66e-21,116;UBERON:0007026,2.66e-21,116;UBERON:0004119,1.20e-20,118;UBERON:0000925,1.20e-20,118;UBERON:0006595,1.20e-20,118;UBERON:0004921,1.31e-19,114;UBERON:0000344,8.85e-19,15;UBERON:0001242,1.06e-16,13;UBERON:0001262,1.06e-16,13;UBERON:0004786,1.06e-16,13;UBERON:0004923,2.81e-12,24;UBERON:0003350,5.41e-12,9;UBERON:0004808,5.41e-12,9;UBERON:0001277,5.41e-12,9;UBERON:0000485,2.53e-09,11|phase1_expression=0,15.7038933437712,10.4649825059593,55.9558790917636,51.0913644545274,25.0140115148716,24.7629399031257,2.7115897922731,1.40788722151667,0.936258105287974,0.171217968225505,0,10.9568467155972,9.79108507092771,0.666219523631325,1.01237633694913,0,6.46697438984387,6.30726394586398,4.66828616977833,0.510259740906419,0.0992909512008853,0.261199789138935,14.8792953197868,13.0763290208287,18.9496548157957,16.3689558540448,17.453169847557,22.2327400763957,24.1948924569534,12.1951780860418,0,0,0,17.0422455653252,17.1221684719247,19.6002582011874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6912173332702,15.9579671242496,13.1076581665561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558365998002762,0.56276261003168,0,0,0.142371680799103,0,0,0,0,0.860423876981386,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,2.8545969929765,4.91981978929626,0.148442139064825,0,0,0,0.150722640552623,0,0.251333182659351,0,0.433798070759735,0.884610551949874,0.161766849947409,0.662524555381181,0.484875253135222,5.59175283654366,0,0,27.3339049073193,0.11981512450592,0,0.127070227073065,0.299581278809645,0.915001205637253,0,0.347648640384553,0,0,0.162241263067758,0,1.36847667671102,4.54900965180614,5.26104639716185,0,0,0,0,0,0,0,3.88055056108524,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,40.6415103070072,17.1892868331304,0,0.464473343720877,4.63922860759536,8.0673409849337,3.55804870151792,5.1360919050391,28.9462727542152,5.43506550589236,6.53471542880701,5.57078121715222,7.99352757188393,26.0657628509724,23.342909386467,26.8840718893396,0,0,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,0.923765950833023,0,0,0.339490171550376,0,0.335012514883631,0,0.390267295715598,0.315270288212382,0,0,1.14704320301017,0.172684981865896,0.578596234326046,0,0,0.491764273019036,0.551873492609465,0.160550589987792,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,1.56134093729095,1.06839362200353,0.81443479676788,8.57844639457184,0,0,0.302323556964751,0,0,0.307435147943927,1.80899805217755,0,0,0,0,0,2.7235168460303,0,0,0,0,0,0.164549020602121,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0,0,0,0,23.3184669303881,0,2.05045056957423,0,0.185194527369712,0.188368457004691,2.46049609897845,0.457556346413045,0.339956859987711,0.979660166265606,0.829199842826543,13.3653886522116,0.474503990371703,2.43983360552218,3.99619761040665,5.22720740036172,7.86105229486239,5.12484516262319,6.94289028092822,6.28214260761671,16.3314866347659,0,0,0,0,0,0,0,0,0,0,0,0,5.05617793005085,0,0.205421914329655,0.77952493786677,1.25318686967237,1.98681354781265,3.12508168751919,3.69223817936443,2.72609414859999,3.81034033274999,4.03304740547362,5.84747284438514,4.04089734889384,7.83075244616512,0,0,0,0,2.51146472241848,3.19060208267009,8.97442958909599,4.07299920250225,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0.760437899670719,0.754505365544305,0.280924522409647,0.320125762024346,0.287177344778066,0.476293691283074,0.927074607558844,0,0.412085900803307,0.735994600671987,0.342869252385415,0.532427418478012,0.476872379894642,0.581385666529314,0.282328141245992,0.761531471025089,0.182927972872773,0.789209134313529,0.543216455383447,0,0.355905054372522,0.591026894253381,0.409231043169689,0.154936841185966,0.385813221962283,0,0.467863216890817,0.859484216193193,0.191288332068843,0.220591419119515,0.695603506861264|short_description=p3@Jakmip1}} | ||
|EntrezGene=76071 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000152445_5end | |||
|description=CAGE_peak_3_at_Jakmip1_5end | |||
|id=chr5:37442147..37442161,+ | |||
|ontology_enrichment_celltype=CL:0002563!5.79e-08!9;CL:0002251!5.79e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.41e-12,9;CL:0002251,5.41e-12,9;CL:0000239,1.24e-08,6;CL:0000677,1.24e-08,6;CL:0000584,1.24e-08,6;CL:0000075,3.35e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.62e-17!59;UBERON:0001007!1.69e-12!128;UBERON:0001555!1.69e-12!128;UBERON:0007026!1.69e-12!128;UBERON:0004119!2.90e-12!130;UBERON:0000925!2.90e-12!130;UBERON:0006595!2.90e-12!130;UBERON:0000160!3.81e-12!43;UBERON:0000344!3.93e-12!15;UBERON:0004921!1.62e-11!126;UBERON:0004185!1.62e-11!126;UBERON:0001242!7.41e-11!13;UBERON:0000060!7.41e-11!13;UBERON:0001262!7.41e-11!13;UBERON:0004786!7.41e-11!13;UBERON:0004923!3.60e-09!24;UBERON:0003350!5.79e-08!9;UBERON:0004808!5.79e-08!9;UBERON:0001277!5.79e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.07e-34,47;UBERON:0000160,2.52e-30,31;UBERON:0001007,2.66e-21,116;UBERON:0001555,2.66e-21,116;UBERON:0007026,2.66e-21,116;UBERON:0004119,1.20e-20,118;UBERON:0000925,1.20e-20,118;UBERON:0006595,1.20e-20,118;UBERON:0004921,1.31e-19,114;UBERON:0000344,8.85e-19,15;UBERON:0001242,1.06e-16,13;UBERON:0001262,1.06e-16,13;UBERON:0004786,1.06e-16,13;UBERON:0004923,2.81e-12,24;UBERON:0003350,5.41e-12,9;UBERON:0004808,5.41e-12,9;UBERON:0001277,5.41e-12,9;UBERON:0000485,2.53e-09,11 | |||
|phase1_expression=0,15.7038933437712,10.4649825059593,55.9558790917636,51.0913644545274,25.0140115148716,24.7629399031257,2.7115897922731,1.40788722151667,0.936258105287974,0.171217968225505,0,10.9568467155972,9.79108507092771,0.666219523631325,1.01237633694913,0,6.46697438984387,6.30726394586398,4.66828616977833,0.510259740906419,0.0992909512008853,0.261199789138935,14.8792953197868,13.0763290208287,18.9496548157957,16.3689558540448,17.453169847557,22.2327400763957,24.1948924569534,12.1951780860418,0,0,0,17.0422455653252,17.1221684719247,19.6002582011874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.6912173332702,15.9579671242496,13.1076581665561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558365998002762,0.56276261003168,0,0,0.142371680799103,0,0,0,0,0.860423876981386,0,0,0,0,1.26399978118577,0,0,0,0,0,0,0,0,0,0,2.8545969929765,4.91981978929626,0.148442139064825,0,0,0,0.150722640552623,0,0.251333182659351,0,0.433798070759735,0.884610551949874,0.161766849947409,0.662524555381181,0.484875253135222,5.59175283654366,0,0,27.3339049073193,0.11981512450592,0,0.127070227073065,0.299581278809645,0.915001205637253,0,0.347648640384553,0,0,0.162241263067758,0,1.36847667671102,4.54900965180614,5.26104639716185,0,0,0,0,0,0,0,3.88055056108524,0,0,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,40.6415103070072,17.1892868331304,0,0.464473343720877,4.63922860759536,8.0673409849337,3.55804870151792,5.1360919050391,28.9462727542152,5.43506550589236,6.53471542880701,5.57078121715222,7.99352757188393,26.0657628509724,23.342909386467,26.8840718893396,0,0,0,0,0.193952487167626,0.140271639780637,0.126473074248515,0,0,0,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0.482443521363367,0.923765950833023,0,0,0.339490171550376,0,0.335012514883631,0,0.390267295715598,0.315270288212382,0,0,1.14704320301017,0.172684981865896,0.578596234326046,0,0,0.491764273019036,0.551873492609465,0.160550589987792,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,1.56134093729095,1.06839362200353,0.81443479676788,8.57844639457184,0,0,0.302323556964751,0,0,0.307435147943927,1.80899805217755,0,0,0,0,0,2.7235168460303,0,0,0,0,0,0.164549020602121,0.304464949114599,0.23467170806371,0,0.220528398054962,0,0,0,0,0,23.3184669303881,0,2.05045056957423,0,0.185194527369712,0.188368457004691,2.46049609897845,0.457556346413045,0.339956859987711,0.979660166265606,0.829199842826543,13.3653886522116,0.474503990371703,2.43983360552218,3.99619761040665,5.22720740036172,7.86105229486239,5.12484516262319,6.94289028092822,6.28214260761671,16.3314866347659,0,0,0,0,0,0,0,0,0,0,0,0,5.05617793005085,0,0.205421914329655,0.77952493786677,1.25318686967237,1.98681354781265,3.12508168751919,3.69223817936443,2.72609414859999,3.81034033274999,4.03304740547362,5.84747284438514,4.04089734889384,7.83075244616512,0,0,0,0,2.51146472241848,3.19060208267009,8.97442958909599,4.07299920250225,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,0.183843508450014,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0.760437899670719,0.754505365544305,0.280924522409647,0.320125762024346,0.287177344778066,0.476293691283074,0.927074607558844,0,0.412085900803307,0.735994600671987,0.342869252385415,0.532427418478012,0.476872379894642,0.581385666529314,0.282328141245992,0.761531471025089,0.182927972872773,0.789209134313529,0.543216455383447,0,0.355905054372522,0.591026894253381,0.409231043169689,0.154936841185966,0.385813221962283,0,0.467863216890817,0.859484216193193,0.191288332068843,0.220591419119515,0.695603506861264 | |||
|short_description=p3@Jakmip1 | |||
}} |
Revision as of 07:36, 14 September 2013
Short description: | p3@Jakmip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Jakmip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000152445_5end |
EntrezGene: | Jakmip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.41e-12 | 9 |
epithelial cell of alimentary canal | 5.41e-12 | 9 |
brush border epithelial cell | 1.24e-08 | 6 |
gut absorptive cell | 1.24e-08 | 6 |
enterocyte | 1.24e-08 | 6 |
columnar/cuboidal epithelial cell | 3.35e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.07e-34 | 47 |
intestine | 2.52e-30 | 31 |
digestive system | 2.66e-21 | 116 |
digestive tract | 2.66e-21 | 116 |
primitive gut | 2.66e-21 | 116 |
endoderm-derived structure | 1.20e-20 | 118 |
endoderm | 1.20e-20 | 118 |
presumptive endoderm | 1.20e-20 | 118 |
subdivision of digestive tract | 1.31e-19 | 114 |
mucosa | 8.85e-19 | 15 |
intestinal mucosa | 1.06e-16 | 13 |
wall of intestine | 1.06e-16 | 13 |
gastrointestinal system mucosa | 1.06e-16 | 13 |
organ component layer | 2.81e-12 | 24 |
epithelium of mucosa | 5.41e-12 | 9 |
gastrointestinal system epithelium | 5.41e-12 | 9 |
intestinal epithelium | 5.41e-12 | 9 |
simple columnar epithelium | 2.53e-09 | 11 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.