FFCP PHASE1:Hg19::chr9:131675060..131675070,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56262|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19027|TSSclassifier=S|UniProt=|association_with_transcript=37bp_to_ENST00000492784_5end|description=CAGE_peak_40_at_LRRC8A_5end|id=chr9:131675060..131675070,+|ontology_enrichment_celltype=CL:0002368!2.22e-18!13;CL:0000066!1.32e-16!254;CL:0002076!1.33e-16!43;CL:0000068!8.79e-13!3;CL:0000069!8.79e-13!3;CL:0000307!8.79e-13!3;CL:0000377!8.79e-13!3;CL:0000223!3.92e-11!59;CL:0000240!2.29e-10!6;CL:0000311!2.29e-10!6;CL:0000079!2.29e-10!6;CL:0000237!2.29e-10!6;CL:0000036!2.29e-10!6;CL:0000357!2.29e-10!6;CL:0000114!2.29e-10!6;CL:0000312!2.45e-07!5;CL:0002202!2.69e-07!9;CL:0002632!2.69e-07!9|ontology_enrichment_celltype_v019=CL:0000307;3.11e-27;3!CL:0002252;4.66e-21;1!CL:0002368;1.94e-14;13!CL:0000575;3.18e-11;2!CL:0002202;9.23e-10;9!CL:0002632;9.23e-10;9|ontology_enrichment_celltype_v019_2=CL:0000068,4.07e-27,3;CL:0000069,4.07e-27,3;CL:0000307,4.07e-27,3;CL:0000377,4.07e-27,3;CL:0002252,5.16e-21,1;CL:0002368,2.08e-14,13;CL:0000575,2.23e-11,2;CL:0002202,1.01e-09,9;CL:0002632,1.01e-09,9;CL:0002076,6.48e-08,42;CL:0000066,2.35e-07,253|ontology_enrichment_development_v019=CL:0000377;3.11e-27;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3111;1.69e-21;1!DOID:3603;1.69e-21;1|ontology_enrichment_disease_v019_2=DOID:3111,1.88e-21,1;DOID:3603,1.88e-21,1|ontology_enrichment_uberon=UBERON:0003126!5.35e-09!7;UBERON:0001005!5.35e-09!7;UBERON:0004119!1.15e-07!169;UBERON:0000925!1.15e-07!169;UBERON:0006595!1.15e-07!169|ontology_enrichment_uberon_v019=UBERON:0003126;2.81e-12;7!UBERON:0001005;2.81e-12;7!UBERON:0001043;6.56e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.15e-12,7;UBERON:0001005,3.15e-12,7;UBERON:0001043,6.78e-08,3;UBERON:0009143,6.78e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,1.45718115317017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,1.3082821564276,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,1.1240175325762,0.201057944823262,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460404944679482,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.768760269460425,2.67986696238627,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,1.34060455107157,1.08890984861323,0.0941438007767792,0,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.307160702099232,0,0,0,0,0.211125408127993,0,0,0,0.20453736500431,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.174118413160805,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3244333569449,0,0,0,0,0,0.559518030877778,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p40@LRRC8A}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=56262 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19027 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=37bp_to_ENST00000492784_5end | |||
|description=CAGE_peak_40_at_LRRC8A_5end | |||
|id=chr9:131675060..131675070,+ | |||
|ontology_enrichment_celltype=CL:0002368!2.22e-18!13;CL:0000066!1.32e-16!254;CL:0002076!1.33e-16!43;CL:0000068!8.79e-13!3;CL:0000069!8.79e-13!3;CL:0000307!8.79e-13!3;CL:0000377!8.79e-13!3;CL:0000223!3.92e-11!59;CL:0000240!2.29e-10!6;CL:0000311!2.29e-10!6;CL:0000079!2.29e-10!6;CL:0000237!2.29e-10!6;CL:0000036!2.29e-10!6;CL:0000357!2.29e-10!6;CL:0000114!2.29e-10!6;CL:0000312!2.45e-07!5;CL:0002202!2.69e-07!9;CL:0002632!2.69e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000307;3.11e-27;3!CL:0002252;4.66e-21;1!CL:0002368;1.94e-14;13!CL:0000575;3.18e-11;2!CL:0002202;9.23e-10;9!CL:0002632;9.23e-10;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,4.07e-27,3;CL:0000069,4.07e-27,3;CL:0000307,4.07e-27,3;CL:0000377,4.07e-27,3;CL:0002252,5.16e-21,1;CL:0002368,2.08e-14,13;CL:0000575,2.23e-11,2;CL:0002202,1.01e-09,9;CL:0002632,1.01e-09,9;CL:0002076,6.48e-08,42;CL:0000066,2.35e-07,253 | |||
|ontology_enrichment_development_v019=CL:0000377;3.11e-27;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3111;1.69e-21;1!DOID:3603;1.69e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3111,1.88e-21,1;DOID:3603,1.88e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0003126!5.35e-09!7;UBERON:0001005!5.35e-09!7;UBERON:0004119!1.15e-07!169;UBERON:0000925!1.15e-07!169;UBERON:0006595!1.15e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0003126;2.81e-12;7!UBERON:0001005;2.81e-12;7!UBERON:0001043;6.56e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.15e-12,7;UBERON:0001005,3.15e-12,7;UBERON:0001043,6.78e-08,3;UBERON:0009143,6.78e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,1.39560233594486,0.655324116390517,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,1.45718115317017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,1.3082821564276,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.219500570817251,1.1240175325762,0.201057944823262,0.648119116109707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460404944679482,0,0,0,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.768760269460425,2.67986696238627,0.4046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769776901804097,1.34060455107157,1.08890984861323,0.0941438007767792,0,0,1.33029046061003,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0.307160702099232,0,0,0,0,0.211125408127993,0,0,0,0.20453736500431,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.174118413160805,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3244333569449,0,0,0,0,0,0.559518030877778,1.24415452006595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0.112131862580613,0.0636471582781649,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p40@LRRC8A | |||
}} |
Revision as of 07:43, 14 September 2013
Short description: | p40@LRRC8A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_40_at_LRRC8A_5end |
Coexpression cluster: | NA |
Association with transcript: | 37bp_to_ENST00000492784_5end |
EntrezGene: | LRRC8A |
HGNC: | 19027 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 4.07e-27 | 3 |
branched duct epithelial cell | 4.07e-27 | 3 |
tracheal epithelial cell | 4.07e-27 | 3 |
tracheoblast | 4.07e-27 | 3 |
epithelial cell of esophagus | 5.16e-21 | 1 |
respiratory epithelial cell | 2.08e-14 | 13 |
corneal epithelial cell | 2.23e-11 | 2 |
epithelial cell of tracheobronchial tree | 1.01e-09 | 9 |
epithelial cell of lower respiratory tract | 1.01e-09 | 9 |
endo-epithelial cell | 6.48e-08 | 42 |
epithelial cell | 2.35e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
trachea | 3.15e-12 | 7 |
respiratory airway | 3.15e-12 | 7 |
esophagus | 6.78e-08 | 3 |
esophageal region | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
cystadenocarcinoma | 1.88e-21 | 1 |
mucinous cystadenocarcinoma | 1.88e-21 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.