FFCP PHASE1:Hg19::chr9:132227445..132227446,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=W|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr9:132227445..132227446,-|id=chr9:132227445..132227446,-|ontology_enrichment_celltype=CL:0002057!6.89e-61!42;CL:0000860!3.64e-56!45;CL:0000839!6.45e-47!70;CL:0002194!6.51e-45!63;CL:0000576!6.51e-45!63;CL:0000040!6.51e-45!63;CL:0000559!6.51e-45!63;CL:0002009!3.14e-43!65;CL:0000557!5.68e-41!71;CL:0000766!8.92e-40!76;CL:0000763!5.60e-30!112;CL:0000049!5.60e-30!112;CL:0002031!7.55e-22!124;CL:0002087!3.90e-19!119;CL:0000738!6.95e-17!140;CL:0002032!9.40e-17!165;CL:0000837!9.40e-17!165;CL:0000037!1.25e-15!172;CL:0000566!1.25e-15!172;CL:0000988!3.55e-14!182|ontology_enrichment_celltype_v019=CL:0000473;2.31e-59;39!CL:0000234;2.31e-59;39!CL:0000860;1.13e-56;33!CL:0002057;1.13e-56;33!CL:0000576;8.91e-28;48!CL:0000766;3.12e-17;69!CL:0000235;3.42e-13;6!CL:0002166;2.84e-12;3!CL:0000763;3.04e-11;100!CL:0000738;1.42e-08;136!CL:0002087;5.20e-07;104|ontology_enrichment_celltype_v019_2=CL:0000473,1.89e-59,48;CL:0000234,1.89e-59,48;CL:0000860,5.33e-48,42;CL:0002057,5.33e-48,42;CL:0002194,5.87e-47,59;CL:0000576,5.87e-47,59;CL:0000040,5.87e-47,59;CL:0000559,5.87e-47,59;CL:0002009,2.41e-45,61;CL:0000839,9.85e-42,66;CL:0000557,4.49e-41,67;CL:0000766,4.75e-38,72;CL:0000763,1.90e-24,108;CL:0000049,1.90e-24,108;CL:0002087,8.82e-23,115;CL:0002031,1.04e-21,120;CL:0000738,8.50e-19,136;CL:0002032,2.14e-15,161;CL:0000837,2.14e-15,161;CL:0000037,1.27e-14,168;CL:0000988,1.02e-13,177;CL:0000235,3.80e-13,6;CL:0002166,3.19e-12,3|ontology_enrichment_development_v019=CL:0002057;1.30e-36;42!CL:0000049;1.05e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.68e-37!80;UBERON:0001474!3.73e-34!86;UBERON:0004765!2.35e-31!101;UBERON:0001434!2.35e-31!101;UBERON:0002390!3.68e-27!102;UBERON:0003061!3.68e-27!102;UBERON:0002193!2.94e-25!112;UBERON:0002405!2.53e-24!115;UBERON:0002204!3.93e-19!167;UBERON:0003081!1.66e-10!216|ontology_enrichment_uberon_v019=UBERON:0001708;1.99e-09;4!UBERON:0008895;1.99e-09;4!UBERON:0011159;1.04e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0004765,4.31e-37,90;UBERON:0002371,6.51e-36,76;UBERON:0001434,4.28e-33,100;UBERON:0001474,4.31e-33,82;UBERON:0002405,7.46e-29,93;UBERON:0002390,3.08e-27,98;UBERON:0003061,3.08e-27,98;UBERON:0002193,1.90e-24,108;UBERON:0002204,1.33e-20,167;UBERON:0003081,5.05e-13,203;UBERON:0001708,2.17e-09,4;UBERON:0008895,2.17e-09,4;UBERON:0011159,1.12e-07,5;UBERON:0000926,3.59e-07,315;UBERON:0004120,3.59e-07,315;UBERON:0006603,3.59e-07,315|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,1.01778767145695,0.755751887377619,1.4555043671269,1.39457422143411,0.411167888021826,2.47765096716083,0.863077176966451,1.5369642391746,0.236482229888585,0.344745680736619,1.29096936716765,1.35426486594342,2.25890807451126,0.545812300115692,0.674170453335254,2.14258724659632,0.962787081228281,1.91801137739712,0.989553900560148,0.598390972864896,0.426224750532694,2.03146467040009,1.70215567407342,0,1.00499466102697,1.5644487552606,1.08594422352558,0,1.84138817993782,0.949387162322653,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0.48217676009124,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0.646584227275248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,2.18376766658517,1.27597587518148,0,0,0,0,0.088048434013226,0,0,0,0.190493682876507,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.473107245101804,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=W | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr9:132227445..132227446,- | |||
|id=chr9:132227445..132227446,- | |||
|ontology_enrichment_celltype=CL:0002057!6.89e-61!42;CL:0000860!3.64e-56!45;CL:0000839!6.45e-47!70;CL:0002194!6.51e-45!63;CL:0000576!6.51e-45!63;CL:0000040!6.51e-45!63;CL:0000559!6.51e-45!63;CL:0002009!3.14e-43!65;CL:0000557!5.68e-41!71;CL:0000766!8.92e-40!76;CL:0000763!5.60e-30!112;CL:0000049!5.60e-30!112;CL:0002031!7.55e-22!124;CL:0002087!3.90e-19!119;CL:0000738!6.95e-17!140;CL:0002032!9.40e-17!165;CL:0000837!9.40e-17!165;CL:0000037!1.25e-15!172;CL:0000566!1.25e-15!172;CL:0000988!3.55e-14!182 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.31e-59;39!CL:0000234;2.31e-59;39!CL:0000860;1.13e-56;33!CL:0002057;1.13e-56;33!CL:0000576;8.91e-28;48!CL:0000766;3.12e-17;69!CL:0000235;3.42e-13;6!CL:0002166;2.84e-12;3!CL:0000763;3.04e-11;100!CL:0000738;1.42e-08;136!CL:0002087;5.20e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.89e-59,48;CL:0000234,1.89e-59,48;CL:0000860,5.33e-48,42;CL:0002057,5.33e-48,42;CL:0002194,5.87e-47,59;CL:0000576,5.87e-47,59;CL:0000040,5.87e-47,59;CL:0000559,5.87e-47,59;CL:0002009,2.41e-45,61;CL:0000839,9.85e-42,66;CL:0000557,4.49e-41,67;CL:0000766,4.75e-38,72;CL:0000763,1.90e-24,108;CL:0000049,1.90e-24,108;CL:0002087,8.82e-23,115;CL:0002031,1.04e-21,120;CL:0000738,8.50e-19,136;CL:0002032,2.14e-15,161;CL:0000837,2.14e-15,161;CL:0000037,1.27e-14,168;CL:0000988,1.02e-13,177;CL:0000235,3.80e-13,6;CL:0002166,3.19e-12,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.30e-36;42!CL:0000049;1.05e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.68e-37!80;UBERON:0001474!3.73e-34!86;UBERON:0004765!2.35e-31!101;UBERON:0001434!2.35e-31!101;UBERON:0002390!3.68e-27!102;UBERON:0003061!3.68e-27!102;UBERON:0002193!2.94e-25!112;UBERON:0002405!2.53e-24!115;UBERON:0002204!3.93e-19!167;UBERON:0003081!1.66e-10!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001708;1.99e-09;4!UBERON:0008895;1.99e-09;4!UBERON:0011159;1.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,4.31e-37,90;UBERON:0002371,6.51e-36,76;UBERON:0001434,4.28e-33,100;UBERON:0001474,4.31e-33,82;UBERON:0002405,7.46e-29,93;UBERON:0002390,3.08e-27,98;UBERON:0003061,3.08e-27,98;UBERON:0002193,1.90e-24,108;UBERON:0002204,1.33e-20,167;UBERON:0003081,5.05e-13,203;UBERON:0001708,2.17e-09,4;UBERON:0008895,2.17e-09,4;UBERON:0011159,1.12e-07,5;UBERON:0000926,3.59e-07,315;UBERON:0004120,3.59e-07,315;UBERON:0006603,3.59e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,1.20538905604795,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,1.01778767145695,0.755751887377619,1.4555043671269,1.39457422143411,0.411167888021826,2.47765096716083,0.863077176966451,1.5369642391746,0.236482229888585,0.344745680736619,1.29096936716765,1.35426486594342,2.25890807451126,0.545812300115692,0.674170453335254,2.14258724659632,0.962787081228281,1.91801137739712,0.989553900560148,0.598390972864896,0.426224750532694,2.03146467040009,1.70215567407342,0,1.00499466102697,1.5644487552606,1.08594422352558,0,1.84138817993782,0.949387162322653,0,0.212604299965044,0,0.112328631146495,0.150176892841506,0.48217676009124,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0.646584227275248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,2.18376766658517,1.27597587518148,0,0,0,0,0.088048434013226,0,0,0,0.190493682876507,0,0,0,0,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,1.50677127429638,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0.473107245101804,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.657779629937804,0.522870902049801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0,0,0.47748896947538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258565912723101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,0,0,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0.449803112163605,0,0,0,0.521745061811734,0,0.761610424337591,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588925401344836,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr9:132227445..132227446,- | |||
}} |
Revision as of 07:46, 14 September 2013
Short description: | p@chr9:132227445..132227446, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr9:132227445..132227446, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.89e-59 | 48 |
phagocyte | 1.89e-59 | 48 |
classical monocyte | 5.33e-48 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.33e-48 | 42 |
monopoietic cell | 5.87e-47 | 59 |
monocyte | 5.87e-47 | 59 |
monoblast | 5.87e-47 | 59 |
promonocyte | 5.87e-47 | 59 |
macrophage dendritic cell progenitor | 2.41e-45 | 61 |
myeloid lineage restricted progenitor cell | 9.85e-42 | 66 |
granulocyte monocyte progenitor cell | 4.49e-41 | 67 |
myeloid leukocyte | 4.75e-38 | 72 |
myeloid cell | 1.90e-24 | 108 |
common myeloid progenitor | 1.90e-24 | 108 |
nongranular leukocyte | 8.82e-23 | 115 |
hematopoietic lineage restricted progenitor cell | 1.04e-21 | 120 |
leukocyte | 8.50e-19 | 136 |
hematopoietic oligopotent progenitor cell | 2.14e-15 | 161 |
hematopoietic multipotent progenitor cell | 2.14e-15 | 161 |
hematopoietic stem cell | 1.27e-14 | 168 |
hematopoietic cell | 1.02e-13 | 177 |
macrophage | 3.80e-13 | 6 |
epithelial cell of Malassez | 3.19e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 4.31e-37 | 90 |
bone marrow | 6.51e-36 | 76 |
skeletal system | 4.28e-33 | 100 |
bone element | 4.31e-33 | 82 |
immune system | 7.46e-29 | 93 |
hematopoietic system | 3.08e-27 | 98 |
blood island | 3.08e-27 | 98 |
hemolymphoid system | 1.90e-24 | 108 |
musculoskeletal system | 1.33e-20 | 167 |
lateral plate mesoderm | 5.05e-13 | 203 |
jaw skeleton | 2.17e-09 | 4 |
splanchnocranium | 2.17e-09 | 4 |
primary subdivision of cranial skeletal system | 1.12e-07 | 5 |
mesoderm | 3.59e-07 | 315 |
mesoderm-derived structure | 3.59e-07 | 315 |
presumptive mesoderm | 3.59e-07 | 315 |
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