FFCP PHASE1:Mm9::chr5:66443992..66444014,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:66443992..66444014,-|id=chr5:66443992..66444014,-|ontology_enrichment_celltype=CL:0002563!4.17e-33!9;CL:0002251!4.17e-33!9;CL:0000066!2.17e-23!25;CL:0000239!5.13e-23!6;CL:0000677!5.13e-23!6;CL:0000212!5.13e-23!6;CL:0000584!5.13e-23!6;CL:0000075!1.19e-19!7;CL:0002076!2.77e-19!15;CL:0000223!2.64e-17!20;CL:0000473!2.95e-12!3;CL:0000627!2.95e-12!3;CL:0000682!2.95e-12!3;CL:0002250!1.23e-11!3;CL:0000063!2.63e-07!66|ontology_enrichment_celltype_v019_2=CL:0000239,4.98e-41,6;CL:0000677,4.98e-41,6;CL:0000584,4.98e-41,6;CL:0002563,6.76e-39,9;CL:0002251,6.76e-39,9;CL:0000075,3.15e-35,7;CL:0000066,3.19e-31,25;CL:0000682,1.40e-29,3;CL:0002076,2.05e-23,15;CL:0000223,1.38e-17,20;CL:0000473,4.10e-13,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!1.44e-39!15;UBERON:0003350!4.17e-33!9;UBERON:0004808!4.17e-33!9;UBERON:0001277!4.17e-33!9;UBERON:0001242!4.32e-33!13;UBERON:0000060!4.32e-33!13;UBERON:0001262!4.32e-33!13;UBERON:0004786!4.32e-33!13;UBERON:0000485!7.93e-27!11;UBERON:0004923!7.97e-24!24;UBERON:0000160!2.51e-10!43;UBERON:0001962!5.25e-08!2;UBERON:0001961!5.25e-08!2;UBERON:0001744!5.25e-08!2;UBERON:0005409!6.35e-07!59|ontology_enrichment_uberon_v019_2=UBERON:0003350,6.76e-39,9;UBERON:0004808,6.76e-39,9;UBERON:0001277,6.76e-39,9;UBERON:0000485,7.24e-32,11;UBERON:0001242,5.41e-27,13;UBERON:0001262,5.41e-27,13;UBERON:0004786,5.41e-27,13;UBERON:0000344,2.05e-23,15;UBERON:0004923,1.15e-14,24;UBERON:0000160,2.36e-11,31;UBERON:0005409,1.84e-07,47|phase1_expression=0,7.32848356042658,5.91499011206397,11.1911758183527,11.520601788766,0.671517087647559,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.68822784320151,6.31655160526522,2.58457197695445,1.50829862880122,0,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0.664938581433969,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr5:66443992..66444014,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:66443992..66444014,- | |||
|id=chr5:66443992..66444014,- | |||
|ontology_enrichment_celltype=CL:0002563!4.17e-33!9;CL:0002251!4.17e-33!9;CL:0000066!2.17e-23!25;CL:0000239!5.13e-23!6;CL:0000677!5.13e-23!6;CL:0000212!5.13e-23!6;CL:0000584!5.13e-23!6;CL:0000075!1.19e-19!7;CL:0002076!2.77e-19!15;CL:0000223!2.64e-17!20;CL:0000473!2.95e-12!3;CL:0000627!2.95e-12!3;CL:0000682!2.95e-12!3;CL:0002250!1.23e-11!3;CL:0000063!2.63e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,4.98e-41,6;CL:0000677,4.98e-41,6;CL:0000584,4.98e-41,6;CL:0002563,6.76e-39,9;CL:0002251,6.76e-39,9;CL:0000075,3.15e-35,7;CL:0000066,3.19e-31,25;CL:0000682,1.40e-29,3;CL:0002076,2.05e-23,15;CL:0000223,1.38e-17,20;CL:0000473,4.10e-13,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.44e-39!15;UBERON:0003350!4.17e-33!9;UBERON:0004808!4.17e-33!9;UBERON:0001277!4.17e-33!9;UBERON:0001242!4.32e-33!13;UBERON:0000060!4.32e-33!13;UBERON:0001262!4.32e-33!13;UBERON:0004786!4.32e-33!13;UBERON:0000485!7.93e-27!11;UBERON:0004923!7.97e-24!24;UBERON:0000160!2.51e-10!43;UBERON:0001962!5.25e-08!2;UBERON:0001961!5.25e-08!2;UBERON:0001744!5.25e-08!2;UBERON:0005409!6.35e-07!59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,6.76e-39,9;UBERON:0004808,6.76e-39,9;UBERON:0001277,6.76e-39,9;UBERON:0000485,7.24e-32,11;UBERON:0001242,5.41e-27,13;UBERON:0001262,5.41e-27,13;UBERON:0004786,5.41e-27,13;UBERON:0000344,2.05e-23,15;UBERON:0004923,1.15e-14,24;UBERON:0000160,2.36e-11,31;UBERON:0005409,1.84e-07,47 | |||
|phase1_expression=0,7.32848356042658,5.91499011206397,11.1911758183527,11.520601788766,0.671517087647559,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.68822784320151,6.31655160526522,2.58457197695445,1.50829862880122,0,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0.664938581433969,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr5:66443992..66444014,- | |||
}} |
Revision as of 07:53, 14 September 2013
Short description: | p@chr5:66443992..66444014, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:66443992..66444014, - |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 4.98e-41 | 6 |
gut absorptive cell | 4.98e-41 | 6 |
enterocyte | 4.98e-41 | 6 |
intestinal epithelial cell | 6.76e-39 | 9 |
epithelial cell of alimentary canal | 6.76e-39 | 9 |
columnar/cuboidal epithelial cell | 3.15e-35 | 7 |
epithelial cell | 3.19e-31 | 25 |
M cell of gut | 1.40e-29 | 3 |
endo-epithelial cell | 2.05e-23 | 15 |
endodermal cell | 1.38e-17 | 20 |
defensive cell | 4.10e-13 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 6.76e-39 | 9 |
gastrointestinal system epithelium | 6.76e-39 | 9 |
intestinal epithelium | 6.76e-39 | 9 |
simple columnar epithelium | 7.24e-32 | 11 |
intestinal mucosa | 5.41e-27 | 13 |
wall of intestine | 5.41e-27 | 13 |
gastrointestinal system mucosa | 5.41e-27 | 13 |
mucosa | 2.05e-23 | 15 |
organ component layer | 1.15e-14 | 24 |
intestine | 2.36e-11 | 31 |
gastrointestinal system | 1.84e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.