FFCP PHASE1:Mm9::chr5:67652057..67652066,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=67878|HGNC=|UniProt=Q9CR67|association_with_transcript=13bp_to_ENSMUST00000161369_5end|description=CAGE_peak_7_at_Tmem33_5end|id=chr5:67652057..67652066,+|ontology_enrichment_celltype=CL:0000548!7.97e-11!115;CL:0000004!7.97e-11!115;CL:0000255!7.97e-11!115;CL:0000144!3.80e-10!121;CL:0000012!3.80e-10!121;CL:0002371!7.52e-10!118;CL:0000063!6.04e-08!66;CL:0000066!3.22e-07!25;CL:0002321!4.85e-07!70;CL:0000220!4.85e-07!70|ontology_enrichment_celltype_v019_2=CL:0000066,1.76e-08,25;CL:0002321,1.83e-07,70;CL:0000223,9.34e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!1.67e-07!25;UBERON:0002330!1.67e-07!25|ontology_enrichment_uberon_v019_2=UBERON:0002365,6.41e-08,25;UBERON:0002330,6.41e-08,25|phase1_expression=1.28119077683835,4.88565570695105,2.27499619694768,1.51232105653415,0.500895729946347,4.53274034162102,1.40167584357315,1.54947988129892,3.94208422024667,3.5109678948299,2.91070545983358,4.30769658574817,0.684802919724823,1.57356724354195,0.999329285446988,1.61980213911861,0.699561878128147,1.10411757875383,0.548457734422955,0,1.87095238332354,1.39007331681239,3.13439746966722,4.31979541542198,5.27641346454491,4.01962374880514,4.73838195774982,5.17130958446134,3.6104449696711,4.03248207615889,4.21287970245079,1.90509202037889,3.07532393792285,0,4.33277429626912,5.15327400611326,1.63335485009895,0.418531630736908,0,1.0470474879476,2.35292595212406,1.36609096991689,1.45653105909346,1.51076181570693,1.82478476195126,2.38610777810186,0.782391344348039,3.2703773457067,3.07560655828261,3.4997381833371,2.37976916763116,1.43752564364972,2.01339127269284,3.62681071005672,2.35265659399725,3.34437266846731,3.43840127926508,2.57836046138721,0,1.5869729378161,0,1.0165335962074,0,3.1496490104849,2.96659908770092,0.7104801149461,3.89480143673926,2.68952813725088,0.725827286159344,0.270011876663381,0.210324961351382,1.14260393761521,1.10434270475807,0.857435594504678,0.479227355091182,0.919218786610021,1.10115880999389,0.893811366596314,2.15049146558741,0.659431438650969,1.00636407962651,1.56274011167028,1.95428099300967,1.68828783009504,1.22238598221448,2.65165726926301,0.854230084794618,0.745597783301202,1.8931548333296,2.26714680320357,4.92769630792852,7.74381489283248,6.79971333707751,9.71465744948071,7.14754059192436,6.72040330646003,5.05599912474307,2.04516387093669,0.259786004602869,0.70667914902068,1.83096445709685,2.56652954828636,0,0,3.89683873820185,3.54703811665138,5.05524445014783,5.1382745873577,2.58937883647172,1.48442139064825,0.173485326766136,1.21786191324856,0.461230994512117,1.65794904607885,0.23517741427141,1.25666591329675,3.46072954828123,3.47038456607788,1.76922110389975,0.808834249737046,0.662524555381181,0.484875253135222,0,0.878342391034642,0.83778682725382,1.78819938646014,1.43778149407104,4.19931911695385,1.39777249780371,0.599162557619291,2.28750301409313,0.125654352112864,0.173824320192276,1.27857728665165,0.41557608911912,0.811206315338788,0.611036183101898,1.36847667671102,2.52722758433675,1.89397670297827,0.910843100738926,1.14951052216736,0,0.30140963567143,0.95251098811859,0.768682321709099,0.562210347358373,0.517406741478031,0.215567992932842,0.378212160335639,0.879755620819744,1.09597866213787,0.834141747676794,0.348252166522167,1.64625709126355,0.398068533636986,1.40442637462647,2.05878325691772,1.70498099637356,0.828503090142008,0.469052119962192,0.36012412292203,0,0.196764231747404,0.308534225774757,0.465067889500816,0.268273401399619,0.350296027101508,0.493679549740441,0.820837320395476,0.324275238183423,1.31579988682799,0.658650345873152,0.671032093801859,0,0,2.31293148088659,2.90895623329899,0.639864751605702,0.464473343720877,0.644337306610467,1.21010114774006,2.44615848229357,1.33157938278791,1.42358718463353,1.15289268306808,2.01068167040216,1.98956472041151,1.9496408711912,0.898819408654221,1.29682829924817,2.38969527905241,0.758671603812327,0.571242563048644,2.25415471346161,0.814605311381257,1.55161989734101,1.33258057791605,1.58091342810643,1.77132177575523,2.35498091762062,3.94870924549762,9.78293669387591,1.50160595144485,2.35870794135844,1.57403478669398,1.82574109249653,0.72353147925725,1.2731292589071,2.01387296215567,2.10775794807546,1.37280706594041,1.43768206527355,1.86070473834252,1.24815069245824,1.26289438973556,3.58794827043824,4.82443521363367,0.923765950833023,1.13694847062291,0.488894929326078,0.509235257325564,0.938760993154008,0.502518772325447,0.238043640886014,1.17080188714679,0.945810864637146,0,0.159454768657487,1.47476983244164,1.03610989119537,1.44649058581512,0,2.71952841909355,7.37646409528554,5.24279817978992,0.321101179975584,1.75817529888305,1.14754461763673,1.26235463602186,1.89304931649754,1.56175497718655,2.15423397732799,2.38968797952552,2.45078541490634,1.13230612315533,2.02405350837447,3.21481443702443,1.97643888973262,0.321321316421807,1.70328102249922,0.890328018336276,0,0.989820737835213,7.96470830039777,0.728341908464944,0.906970670894253,0.377210159511796,1.47650946440386,1.84461088766356,1.03371317267288,0,1.06949213515416,2.21225730555071,0,2.06271086496374,2.38307724027652,0.900305470156551,0.776152102696527,0,1.59606210278046,0.891844088010353,0.822745103010605,0.608929898229199,1.64270195644597,2.96564899209348,2.64634077665954,0.65954501176592,0.484393280087717,0.844380948994182,1.3130957840345,1.47726809770555,2.62332752966866,0.556275906031529,1.19609616558497,0.206386867963223,1.11116716421827,1.13021074202815,1.50363650493128,0.686334519619568,1.01987057996313,1.53946597556024,2.3493995546752,2.86401185404534,0.949007980743406,1.62655573701479,1.51207477150522,1.67270636811575,2.18362563746178,1.07891477107857,2.39695021603474,4.4498510137285,2.59229946583586,1.86401793926078,0,0.448549638131936,0.330916980914195,0.583353565032143,0.387479470433193,0.506868376472335,0.234714477291508,0.13020438484395,0.209718688851422,0.241584120826006,1.15212002503146,0.632022241256357,0.810900861160657,0.308132871494482,0.649604114888975,0.358053391334963,0.79472541912506,0.721172697119813,0.590758108698309,0.605798699688886,0.381034033274999,0.201652370273681,0.487289403698762,0.384847366561318,0.116876902181569,0.226730383615211,3.32978930061097,1.61484941897056,3.8613461763738,1.73870634628971,2.25218970541418,2.01466786693992,0.643105137237198,1.00314420807073,0.564751842617067,0,1.14579102687879,0.343706364687375,0.685082519770642,0,0.675022500231806,0,0.453142408984205,1.03552062350364,0.103787347584177,0.798049746802062,1.02440163452481,1.45864030240976,0.209613162627982,0,0.222246727801615,1.03017528619447,0,1.26348605881899,0.760437899670719,0.754505365544305,0.749132059759059,1.02440243847791,0.631790158511746,1.42888107384922,0.347652977834566,1.35036454324594,1.64834360321323,0.883193520806384,2.05721551431249,1.24233064311536,0.953744759789284,0.436039249896986,0.658765662907314,0.930760686808441,1.64635175585495,0.526139422875686,0.543216455383447,0,0.711810108745045,0.29551344712669,0,1.85924209423159,0.771626443924566,0.249810577937946,0.467863216890817,0.859484216193193,0.765153328275374,0.882365676478062,0.927471342481686|short_description=p7@Tmem33}} | ||
|EntrezGene=67878 | |||
|HGNC= | |||
|UniProt=Q9CR67 | |||
|association_with_transcript=13bp_to_ENSMUST00000161369_5end | |||
|description=CAGE_peak_7_at_Tmem33_5end | |||
|id=chr5:67652057..67652066,+ | |||
|ontology_enrichment_celltype=CL:0000548!7.97e-11!115;CL:0000004!7.97e-11!115;CL:0000255!7.97e-11!115;CL:0000144!3.80e-10!121;CL:0000012!3.80e-10!121;CL:0002371!7.52e-10!118;CL:0000063!6.04e-08!66;CL:0000066!3.22e-07!25;CL:0002321!4.85e-07!70;CL:0000220!4.85e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.76e-08,25;CL:0002321,1.83e-07,70;CL:0000223,9.34e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002365!1.67e-07!25;UBERON:0002330!1.67e-07!25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002365,6.41e-08,25;UBERON:0002330,6.41e-08,25 | |||
|phase1_expression=1.28119077683835,4.88565570695105,2.27499619694768,1.51232105653415,0.500895729946347,4.53274034162102,1.40167584357315,1.54947988129892,3.94208422024667,3.5109678948299,2.91070545983358,4.30769658574817,0.684802919724823,1.57356724354195,0.999329285446988,1.61980213911861,0.699561878128147,1.10411757875383,0.548457734422955,0,1.87095238332354,1.39007331681239,3.13439746966722,4.31979541542198,5.27641346454491,4.01962374880514,4.73838195774982,5.17130958446134,3.6104449696711,4.03248207615889,4.21287970245079,1.90509202037889,3.07532393792285,0,4.33277429626912,5.15327400611326,1.63335485009895,0.418531630736908,0,1.0470474879476,2.35292595212406,1.36609096991689,1.45653105909346,1.51076181570693,1.82478476195126,2.38610777810186,0.782391344348039,3.2703773457067,3.07560655828261,3.4997381833371,2.37976916763116,1.43752564364972,2.01339127269284,3.62681071005672,2.35265659399725,3.34437266846731,3.43840127926508,2.57836046138721,0,1.5869729378161,0,1.0165335962074,0,3.1496490104849,2.96659908770092,0.7104801149461,3.89480143673926,2.68952813725088,0.725827286159344,0.270011876663381,0.210324961351382,1.14260393761521,1.10434270475807,0.857435594504678,0.479227355091182,0.919218786610021,1.10115880999389,0.893811366596314,2.15049146558741,0.659431438650969,1.00636407962651,1.56274011167028,1.95428099300967,1.68828783009504,1.22238598221448,2.65165726926301,0.854230084794618,0.745597783301202,1.8931548333296,2.26714680320357,4.92769630792852,7.74381489283248,6.79971333707751,9.71465744948071,7.14754059192436,6.72040330646003,5.05599912474307,2.04516387093669,0.259786004602869,0.70667914902068,1.83096445709685,2.56652954828636,0,0,3.89683873820185,3.54703811665138,5.05524445014783,5.1382745873577,2.58937883647172,1.48442139064825,0.173485326766136,1.21786191324856,0.461230994512117,1.65794904607885,0.23517741427141,1.25666591329675,3.46072954828123,3.47038456607788,1.76922110389975,0.808834249737046,0.662524555381181,0.484875253135222,0,0.878342391034642,0.83778682725382,1.78819938646014,1.43778149407104,4.19931911695385,1.39777249780371,0.599162557619291,2.28750301409313,0.125654352112864,0.173824320192276,1.27857728665165,0.41557608911912,0.811206315338788,0.611036183101898,1.36847667671102,2.52722758433675,1.89397670297827,0.910843100738926,1.14951052216736,0,0.30140963567143,0.95251098811859,0.768682321709099,0.562210347358373,0.517406741478031,0.215567992932842,0.378212160335639,0.879755620819744,1.09597866213787,0.834141747676794,0.348252166522167,1.64625709126355,0.398068533636986,1.40442637462647,2.05878325691772,1.70498099637356,0.828503090142008,0.469052119962192,0.36012412292203,0,0.196764231747404,0.308534225774757,0.465067889500816,0.268273401399619,0.350296027101508,0.493679549740441,0.820837320395476,0.324275238183423,1.31579988682799,0.658650345873152,0.671032093801859,0,0,2.31293148088659,2.90895623329899,0.639864751605702,0.464473343720877,0.644337306610467,1.21010114774006,2.44615848229357,1.33157938278791,1.42358718463353,1.15289268306808,2.01068167040216,1.98956472041151,1.9496408711912,0.898819408654221,1.29682829924817,2.38969527905241,0.758671603812327,0.571242563048644,2.25415471346161,0.814605311381257,1.55161989734101,1.33258057791605,1.58091342810643,1.77132177575523,2.35498091762062,3.94870924549762,9.78293669387591,1.50160595144485,2.35870794135844,1.57403478669398,1.82574109249653,0.72353147925725,1.2731292589071,2.01387296215567,2.10775794807546,1.37280706594041,1.43768206527355,1.86070473834252,1.24815069245824,1.26289438973556,3.58794827043824,4.82443521363367,0.923765950833023,1.13694847062291,0.488894929326078,0.509235257325564,0.938760993154008,0.502518772325447,0.238043640886014,1.17080188714679,0.945810864637146,0,0.159454768657487,1.47476983244164,1.03610989119537,1.44649058581512,0,2.71952841909355,7.37646409528554,5.24279817978992,0.321101179975584,1.75817529888305,1.14754461763673,1.26235463602186,1.89304931649754,1.56175497718655,2.15423397732799,2.38968797952552,2.45078541490634,1.13230612315533,2.02405350837447,3.21481443702443,1.97643888973262,0.321321316421807,1.70328102249922,0.890328018336276,0,0.989820737835213,7.96470830039777,0.728341908464944,0.906970670894253,0.377210159511796,1.47650946440386,1.84461088766356,1.03371317267288,0,1.06949213515416,2.21225730555071,0,2.06271086496374,2.38307724027652,0.900305470156551,0.776152102696527,0,1.59606210278046,0.891844088010353,0.822745103010605,0.608929898229199,1.64270195644597,2.96564899209348,2.64634077665954,0.65954501176592,0.484393280087717,0.844380948994182,1.3130957840345,1.47726809770555,2.62332752966866,0.556275906031529,1.19609616558497,0.206386867963223,1.11116716421827,1.13021074202815,1.50363650493128,0.686334519619568,1.01987057996313,1.53946597556024,2.3493995546752,2.86401185404534,0.949007980743406,1.62655573701479,1.51207477150522,1.67270636811575,2.18362563746178,1.07891477107857,2.39695021603474,4.4498510137285,2.59229946583586,1.86401793926078,0,0.448549638131936,0.330916980914195,0.583353565032143,0.387479470433193,0.506868376472335,0.234714477291508,0.13020438484395,0.209718688851422,0.241584120826006,1.15212002503146,0.632022241256357,0.810900861160657,0.308132871494482,0.649604114888975,0.358053391334963,0.79472541912506,0.721172697119813,0.590758108698309,0.605798699688886,0.381034033274999,0.201652370273681,0.487289403698762,0.384847366561318,0.116876902181569,0.226730383615211,3.32978930061097,1.61484941897056,3.8613461763738,1.73870634628971,2.25218970541418,2.01466786693992,0.643105137237198,1.00314420807073,0.564751842617067,0,1.14579102687879,0.343706364687375,0.685082519770642,0,0.675022500231806,0,0.453142408984205,1.03552062350364,0.103787347584177,0.798049746802062,1.02440163452481,1.45864030240976,0.209613162627982,0,0.222246727801615,1.03017528619447,0,1.26348605881899,0.760437899670719,0.754505365544305,0.749132059759059,1.02440243847791,0.631790158511746,1.42888107384922,0.347652977834566,1.35036454324594,1.64834360321323,0.883193520806384,2.05721551431249,1.24233064311536,0.953744759789284,0.436039249896986,0.658765662907314,0.930760686808441,1.64635175585495,0.526139422875686,0.543216455383447,0,0.711810108745045,0.29551344712669,0,1.85924209423159,0.771626443924566,0.249810577937946,0.467863216890817,0.859484216193193,0.765153328275374,0.882365676478062,0.927471342481686 | |||
|short_description=p7@Tmem33 | |||
}} | |||
Revision as of 07:55, 14 September 2013
| Short description: | p7@Tmem33 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_7_at_Tmem33_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 13bp_to_ENSMUST00000161369_5end |
| EntrezGene: | Tmem33 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 1.76e-08 | 25 |
| embryonic cell | 1.83e-07 | 70 |
| endodermal cell | 9.34e-07 | 20 |
| Ontology term | p-value | n |
|---|---|---|
| exocrine gland | 6.41e-08 | 25 |
| exocrine system | 6.41e-08 | 25 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
