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FFCP PHASE1:Mm9::chr5:76733981..76734018,-: Difference between revisions

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{{FFCP
{{FFCP|EntrezGene=12753|HGNC=|MCL_coexpression_id=24|UniProt=Q6ZQD6,O08785|association_with_transcript=-164bp_to_ENSMUST00000031148,ENSMUST00000113497_5end|description=CAGE_peak_3_at_Clock_5end|id=chr5:76733981..76734018,-|ontology_enrichment_celltype=CL:0002563!3.49e-07!9;CL:0002251!3.49e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,7.31e-08,9;CL:0002251,7.31e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.36e-20!43;UBERON:0005409!2.49e-17!59;UBERON:0000344!1.27e-10!15;UBERON:0001242!2.17e-09!13;UBERON:0000060!2.17e-09!13;UBERON:0001262!2.17e-09!13;UBERON:0004786!2.17e-09!13;UBERON:0003350!3.49e-07!9;UBERON:0004808!3.49e-07!9;UBERON:0001277!3.49e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.06e-20,31;UBERON:0005409,3.27e-15,47;UBERON:0000344,1.04e-11,15;UBERON:0001242,2.48e-10,13;UBERON:0001262,2.48e-10,13;UBERON:0004786,2.48e-10,13;UBERON:0003350,7.31e-08,9;UBERON:0004808,7.31e-08,9;UBERON:0001277,7.31e-08,9|phase1_expression=0.640595388419176,16.0528687514106,23.6599604482559,21.7774232140918,17.5313505481222,11.4157904900085,6.54115393667472,0,0,0.468129052643987,0.171217968225505,0.0797721589953364,0,0.262261207256992,0,0.404950534779652,0,0.630924330716475,0.411343300817216,0.84877930359606,0.850432901510698,0,0,8.15961356246374,7.57050627521661,12.6331032105304,11.1998119001359,10.5580904016086,5.70070258369122,5.04060259519861,4.6563407237614,0,0,0,7.51014211353314,4.82080471539628,7.75843553797003,0,0,0,0,0,0,1.00717454380462,1.92616169317078,0.917733760808408,0,0.65407546914134,0.219686182734472,0.777719596297134,0.419959264876088,0,0.335565212115473,0,0.336093799142464,1.02903774414379,0,0.515672092277442,0,0,0.633831403506179,0,0,0,0.988866362566974,0.7104801149461,0.599200221036809,0.384218305321555,0.207379224616955,0,0,0.571301968807607,0.220868540951614,0.122490799214954,0.191690942036473,0,1.10115880999389,1.27687338085188,1.22885226604995,0,0.0914876436024097,0,1.11673199600552,0.56276261003168,0.916789486660861,0.589257170947335,0.427115042397309,0.559198337475902,3.3319525066601,2.72057616384428,1.44932244350839,0.860423876981386,0,0,3.24888208723835,0,0.421333260395256,0.852151612890289,0.519572009205738,0.35333957451034,0.563373679106722,0,0,0,2.59789249213457,2.02687892380079,1.51657333504435,3.9964357901671,1.03575153458869,1.33597925158342,0.520455980298408,0.608930956624282,0.230615497256059,0.904335843315735,2.3517741427141,0.753999547978053,1.23597483867187,1.15679485535929,0.884610551949874,1.45590164952668,1.32504911076236,0,13.0474232852686,1.46390398505774,1.8850203613211,4.08731288333746,0,0,0,1.19832511523858,2.28750301409313,0.125654352112864,0.521472960576829,1.27857728665165,1.66230435647648,1.46017136760982,1.83310854930569,0.995255764880744,1.0108910337347,2.52530227063769,0.390361328888111,0.689706313300419,0.180062129805349,0.452114453507145,1.49680298132921,1.66547836370305,1.87403449119458,1.81092359517311,0,0.945530400839096,0.527853372491847,0.43839146485515,1.11218899690239,1.39300866608867,3.2925141825271,0.796137067273973,0.702213187313235,0,0.568326998791185,0.828503090142008,0.469052119962192,0.540186184383045,0.946978942340841,0.787056926989615,1.3884040159864,0.465067889500816,1.3413670069981,2.10177616260905,1.97471819896177,1.64167464079095,1.21603214318784,1.31579988682799,1.09775057645525,1.47627060636409,1.05144974282064,0.514523061896422,9.91256348951394,6.87571473325215,1.91959425481711,1.85789337488351,4.12375876230699,5.24377164020691,4.89231696458715,2.85338439168839,7.11793592316767,3.29397909448022,3.77002813200404,3.78017296878187,2.72949721966768,7.19055526923377,6.26800344636613,11.1519113022446,0,1.02823661348756,2.25415471346161,1.22190796707189,1.16371492300575,1.68325967736765,1.51767689098217,1.47610147979602,1.8839847340965,1.1105744752962,0.592905254174298,0.333690211432188,0.393117990226406,0.449724224769707,0.405720242777006,0.241177159752417,0,0.575392274901621,0.972811360650212,0.823684239564244,1.43768206527355,0,2.18426371180192,1.01031551178845,2.69096120282868,2.8946611281802,1.10851914099963,0.37898282354097,1.14075483509418,0.678980343100753,0.704070744865506,1.50755631697634,1.90434912708811,1.36593553500459,0.788175720530955,2.21464689648775,1.75400245523236,1.47476983244164,2.07221978239075,2.16973587872267,1.50791283939272,0.54390568381871,1.96705709207614,0.275936746304732,1.76605648986571,1.28932855251423,1.14754461763673,2.01976741763498,0.631016438832513,1.56175497718655,0.861693590931196,0.716906393857656,0.891194696329576,1.41538265394416,2.42886421004937,0.584511715822624,0.790575555893047,1.60660658210904,1.70328102249922,0.178065603667255,0.81443479676788,2.63952196756057,1.32745138339963,0.728341908464944,1.81394134178851,2.64047111658257,1.47650946440386,2.45948118355142,2.06742634534577,2.90826983582004,2.13898427030833,2.52829406348653,2.10837217149998,3.09406629744561,2.04263763452273,0.540183282093931,0.129358683782755,0.857348140126369,1.41872186913819,1.07021290561242,1.15184314421485,0.304464949114599,1.64270195644597,1.0591603543191,1.98475558249466,5.11147384118588,3.22928853391811,2.77439454669517,1.90995750405018,1.47726809770555,4.08073171281791,2.03967832211561,0.512612642393558,0.412773735926445,0.370389054739423,0.565105371014073,0.683471138605126,0.228778173206523,0.339956859987711,0.279902904647316,0.276399947608848,0.954670618015114,0.474503990371703,1.21991680276109,2.91614420218863,1.04544148007234,2.18362563746178,4.98998081623837,3.55409859618945,6.28214260761671,4.01806417204558,0,0.56369293868419,0.149516546043979,0.330916980914195,0.388902376688095,0.258319646955462,0.168956125490778,0.469428954583016,2.21347454234715,2.41176492179135,1.44950472495604,1.44015003128933,0,0.202725215290164,0.308132871494482,0.25984164595559,0.358053391334963,0.596044064343795,0.360586348559907,0.443068581523732,0.504832249740738,0.838274873204998,0.302478555410522,0.194915761479505,0.288635524920988,0.233753804363138,11.5632495643758,1.10992976687032,1.16628013592318,1.84673078000486,2.51146472241848,1.68914227906064,1.28206136987086,13.5052078819811,1.50471631210609,1.12950368523413,0.460325236507177,0.572895513439397,0.68741272937475,2.05524755931193,0.755393897389701,0,1.35096360967266,0.906284817968409,0,0.31136204275253,0.798049746802062,1.19513524027894,2.18796045361465,0,2.20612210140017,1.77797382241292,0.618105171716683,1.60459604795908,2.27427490587418,2.02783439912192,0.565879024158229,1.591905626988,1.40855335290712,2.35485422718014,1.90517476513229,1.50649623728312,0.964546102318525,1.64834360321323,1.61918812147837,2.74295401908332,2.30718548007139,0.715308569841963,2.18019624948493,1.88218760830661,1.60767754994185,1.64635175585495,1.8414879800649,1.49384525230448,2.24456908663095,1.77952527186261,2.26560309463796,1.63692417267876,2.16911577660352,1.54325288784913,0.999242311751784,1.16965804222704,2.57845264857958,1.14772999241306,1.54413993383661,2.31867835620421|short_description=p3@Clock}}
|EntrezGene=12753
|HGNC=
|MCL_coexpression_id=24
|UniProt=Q6ZQD6,O08785
|association_with_transcript=-164bp_to_ENSMUST00000031148,ENSMUST00000113497_5end
|description=CAGE_peak_3_at_Clock_5end
|id=chr5:76733981..76734018,-
|ontology_enrichment_celltype=CL:0002563!3.49e-07!9;CL:0002251!3.49e-07!9
|ontology_enrichment_celltype_v019_2=CL:0002563,7.31e-08,9;CL:0002251,7.31e-08,9
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!3.36e-20!43;UBERON:0005409!2.49e-17!59;UBERON:0000344!1.27e-10!15;UBERON:0001242!2.17e-09!13;UBERON:0000060!2.17e-09!13;UBERON:0001262!2.17e-09!13;UBERON:0004786!2.17e-09!13;UBERON:0003350!3.49e-07!9;UBERON:0004808!3.49e-07!9;UBERON:0001277!3.49e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.06e-20,31;UBERON:0005409,3.27e-15,47;UBERON:0000344,1.04e-11,15;UBERON:0001242,2.48e-10,13;UBERON:0001262,2.48e-10,13;UBERON:0004786,2.48e-10,13;UBERON:0003350,7.31e-08,9;UBERON:0004808,7.31e-08,9;UBERON:0001277,7.31e-08,9
|phase1_expression=0.640595388419176,16.0528687514106,23.6599604482559,21.7774232140918,17.5313505481222,11.4157904900085,6.54115393667472,0,0,0.468129052643987,0.171217968225505,0.0797721589953364,0,0.262261207256992,0,0.404950534779652,0,0.630924330716475,0.411343300817216,0.84877930359606,0.850432901510698,0,0,8.15961356246374,7.57050627521661,12.6331032105304,11.1998119001359,10.5580904016086,5.70070258369122,5.04060259519861,4.6563407237614,0,0,0,7.51014211353314,4.82080471539628,7.75843553797003,0,0,0,0,0,0,1.00717454380462,1.92616169317078,0.917733760808408,0,0.65407546914134,0.219686182734472,0.777719596297134,0.419959264876088,0,0.335565212115473,0,0.336093799142464,1.02903774414379,0,0.515672092277442,0,0,0.633831403506179,0,0,0,0.988866362566974,0.7104801149461,0.599200221036809,0.384218305321555,0.207379224616955,0,0,0.571301968807607,0.220868540951614,0.122490799214954,0.191690942036473,0,1.10115880999389,1.27687338085188,1.22885226604995,0,0.0914876436024097,0,1.11673199600552,0.56276261003168,0.916789486660861,0.589257170947335,0.427115042397309,0.559198337475902,3.3319525066601,2.72057616384428,1.44932244350839,0.860423876981386,0,0,3.24888208723835,0,0.421333260395256,0.852151612890289,0.519572009205738,0.35333957451034,0.563373679106722,0,0,0,2.59789249213457,2.02687892380079,1.51657333504435,3.9964357901671,1.03575153458869,1.33597925158342,0.520455980298408,0.608930956624282,0.230615497256059,0.904335843315735,2.3517741427141,0.753999547978053,1.23597483867187,1.15679485535929,0.884610551949874,1.45590164952668,1.32504911076236,0,13.0474232852686,1.46390398505774,1.8850203613211,4.08731288333746,0,0,0,1.19832511523858,2.28750301409313,0.125654352112864,0.521472960576829,1.27857728665165,1.66230435647648,1.46017136760982,1.83310854930569,0.995255764880744,1.0108910337347,2.52530227063769,0.390361328888111,0.689706313300419,0.180062129805349,0.452114453507145,1.49680298132921,1.66547836370305,1.87403449119458,1.81092359517311,0,0.945530400839096,0.527853372491847,0.43839146485515,1.11218899690239,1.39300866608867,3.2925141825271,0.796137067273973,0.702213187313235,0,0.568326998791185,0.828503090142008,0.469052119962192,0.540186184383045,0.946978942340841,0.787056926989615,1.3884040159864,0.465067889500816,1.3413670069981,2.10177616260905,1.97471819896177,1.64167464079095,1.21603214318784,1.31579988682799,1.09775057645525,1.47627060636409,1.05144974282064,0.514523061896422,9.91256348951394,6.87571473325215,1.91959425481711,1.85789337488351,4.12375876230699,5.24377164020691,4.89231696458715,2.85338439168839,7.11793592316767,3.29397909448022,3.77002813200404,3.78017296878187,2.72949721966768,7.19055526923377,6.26800344636613,11.1519113022446,0,1.02823661348756,2.25415471346161,1.22190796707189,1.16371492300575,1.68325967736765,1.51767689098217,1.47610147979602,1.8839847340965,1.1105744752962,0.592905254174298,0.333690211432188,0.393117990226406,0.449724224769707,0.405720242777006,0.241177159752417,0,0.575392274901621,0.972811360650212,0.823684239564244,1.43768206527355,0,2.18426371180192,1.01031551178845,2.69096120282868,2.8946611281802,1.10851914099963,0.37898282354097,1.14075483509418,0.678980343100753,0.704070744865506,1.50755631697634,1.90434912708811,1.36593553500459,0.788175720530955,2.21464689648775,1.75400245523236,1.47476983244164,2.07221978239075,2.16973587872267,1.50791283939272,0.54390568381871,1.96705709207614,0.275936746304732,1.76605648986571,1.28932855251423,1.14754461763673,2.01976741763498,0.631016438832513,1.56175497718655,0.861693590931196,0.716906393857656,0.891194696329576,1.41538265394416,2.42886421004937,0.584511715822624,0.790575555893047,1.60660658210904,1.70328102249922,0.178065603667255,0.81443479676788,2.63952196756057,1.32745138339963,0.728341908464944,1.81394134178851,2.64047111658257,1.47650946440386,2.45948118355142,2.06742634534577,2.90826983582004,2.13898427030833,2.52829406348653,2.10837217149998,3.09406629744561,2.04263763452273,0.540183282093931,0.129358683782755,0.857348140126369,1.41872186913819,1.07021290561242,1.15184314421485,0.304464949114599,1.64270195644597,1.0591603543191,1.98475558249466,5.11147384118588,3.22928853391811,2.77439454669517,1.90995750405018,1.47726809770555,4.08073171281791,2.03967832211561,0.512612642393558,0.412773735926445,0.370389054739423,0.565105371014073,0.683471138605126,0.228778173206523,0.339956859987711,0.279902904647316,0.276399947608848,0.954670618015114,0.474503990371703,1.21991680276109,2.91614420218863,1.04544148007234,2.18362563746178,4.98998081623837,3.55409859618945,6.28214260761671,4.01806417204558,0,0.56369293868419,0.149516546043979,0.330916980914195,0.388902376688095,0.258319646955462,0.168956125490778,0.469428954583016,2.21347454234715,2.41176492179135,1.44950472495604,1.44015003128933,0,0.202725215290164,0.308132871494482,0.25984164595559,0.358053391334963,0.596044064343795,0.360586348559907,0.443068581523732,0.504832249740738,0.838274873204998,0.302478555410522,0.194915761479505,0.288635524920988,0.233753804363138,11.5632495643758,1.10992976687032,1.16628013592318,1.84673078000486,2.51146472241848,1.68914227906064,1.28206136987086,13.5052078819811,1.50471631210609,1.12950368523413,0.460325236507177,0.572895513439397,0.68741272937475,2.05524755931193,0.755393897389701,0,1.35096360967266,0.906284817968409,0,0.31136204275253,0.798049746802062,1.19513524027894,2.18796045361465,0,2.20612210140017,1.77797382241292,0.618105171716683,1.60459604795908,2.27427490587418,2.02783439912192,0.565879024158229,1.591905626988,1.40855335290712,2.35485422718014,1.90517476513229,1.50649623728312,0.964546102318525,1.64834360321323,1.61918812147837,2.74295401908332,2.30718548007139,0.715308569841963,2.18019624948493,1.88218760830661,1.60767754994185,1.64635175585495,1.8414879800649,1.49384525230448,2.24456908663095,1.77952527186261,2.26560309463796,1.63692417267876,2.16911577660352,1.54325288784913,0.999242311751784,1.16965804222704,2.57845264857958,1.14772999241306,1.54413993383661,2.31867835620421
|short_description=p3@Clock
}}

Revision as of 08:02, 14 September 2013

Short description:p3@Clock
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Clock_5end
Coexpression cluster:MCL_coexpression_mm9:24
Association with transcript: -164bp_to_ENSMUST00000031148, ENSMUST00000113497_5end
EntrezGene:Clock
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p3@Clock

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I516.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I623.66
CD326+ enterocyte, pool1.CNhs13542.11848-124I321.78
CD326+ enterocyte, pool2.CNhs13197.11849-124I417.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I711.42
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.54
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.85
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D18.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D27.57
GP2+ M cell, pool1.CNhs13228.11845-124H912.63
GP2+ M cell, pool2.CNhs13231.11846-124I111.20
GP2+ M cell, pool3.CNhs13240.11847-124I210.56
Ileum epithelium, pool1.CNhs13199.10252-104B95.70
Ileum epithelium, pool2.CNhs13232.10253-104C15.04
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C84.66
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F57.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F64.82
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F77.76
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.01
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.93
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.92
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.63
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.43
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.56
Mouse Schwann, donor1.CNhs12507.11728-123D93.33
Mouse Schwann, donor2.CNhs12573.11746-123F92.72
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.52
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G12.60
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B64.00
accessory axillary lymph node, adult.CNhs10475.1063-29H91.04
adrenal gland, adult.CNhs10508.49-24D71.34
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.61
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C12.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A81.24
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F51.46
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H413.05
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.89
colon, adult.CNhs10468.36-18H74.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.83
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.00
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G42.53
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C61.50
eyeball, neonate N01.CNhs11140.1532-43E71.67
eyeball, neonate N02.CNhs11205.1551-44G81.87
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.95
forelimb, embryo E13.CNhs10589.384-1E20.53
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B53.29
gonad, embryo E13.CNhs11044.1564-45I60.80
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.83
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.54
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.39
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I21.97
heart, neonate N10.CNhs11118.749-24G11.64
heart, neonate N16.CNhs11209.782-15G11.22
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I39.91
intestine, adult.CNhs10496.178-9A36.88
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D51.86
intestine, embryo E15.CNhs10602.976-16D84.12
intestine, embryo E16.CNhs10585.463-22H45.24
intestine, embryo E17.CNhs10582.482-18D34.89
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D17.12
intestine, neonate N01.CNhs11192.1322-23E93.29
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F23.78
intestine, neonate N10.CNhs11098.755-23A52.73
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E36.27
intestine, neonate N30.CNhs11131.1384-42G111.15
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.22
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G71.68
kidney, neonate N10.CNhs11206.758-6D51.52
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F31.88
kidney, neonate N30.CNhs11203.1385-42H11.11
liver, adult pregnant day01.CNhs10466.508-5B20.59
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B92.18
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H12.69
liver, neonate N30.CNhs11106.1382-42D12.89
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F81.14
lung, embryo E15.CNhs11020.432-17C50.68
lung, embryo E16.CNhs10998.458-17B60.70
lung, embryo E17.CNhs10605.480-44A61.51
lung, embryo E18.CNhs10583.1287-20I61.90
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.79
lung, neonate N07.CNhs11111.715-19A32.21
lung, neonate N10.CNhs11219.750-23E61.75
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C72.07
lung, neonate N30.CNhs11133.1394-42H22.17
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B61.97
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C21.77
medulla oblongata, neonate N30.CNhs11200.1396-42A31.29
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.02
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.89
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I71.70
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G62.64
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E52.64
pancreas, embryo E17.CNhs10599.1558-45G31.48
pancreas, embryo E18.CNhs10580.1535-43I72.46
pancreas, neonate N00.CNhs11105.645-26G92.07
pancreas, neonate N01.CNhs11138.1531-43D72.91
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B91.42
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I71.64
placenta, adult pregnant day17.CNhs10464.577-18G31.06
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C35.11
skin, neonate N00.CNhs11124.650-25G43.23
skin, neonate N03.CNhs11215.662-22H32.77
skin, neonate N06.CNhs11097.693-20I51.91
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.51
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D42.92
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C62.18
stomach, neonate N03.CNhs11193.1340-24B84.99
stomach, neonate N07.CNhs11210.718-18A93.55
stomach, neonate N25.CNhs11104.1355-25E46.28
stomach, neonate N30.CNhs11134.1386-42I14.02
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I42.21
testis, neonate N10.CNhs11204.763-44D92.41
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F80.36
thymus, neonate N03.CNhs11137.2104-43C70.44
thymus, neonate N06.CNhs11197.681-26C40.50
thymus, neonate N07.CNhs11211.713-19D30.84
thymus, neonate N10.CNhs11194.748-24E40.30
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.29
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B411.56
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.11
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.17
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E42.51
uterus, adult pregnant day19.CNhs10497.590-15F51.69
uterus, adult.CNhs10509.92-27E51.28
vagina, adult.CNhs10502.89-27D513.51
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.69
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.60
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.03
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.41
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.35
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.62
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.18
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.61
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.27
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.17
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C61.15
whole body, neonate N06.CNhs10515.692-21D11.54
whole body, neonate N10.CNhs10518.761-6B42.32





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
intestinal epithelial cell7.31e-089
epithelial cell of alimentary canal7.31e-089

Uber anatomy
Ontology termp-valuen
intestine3.06e-2031
gastrointestinal system3.27e-1547
mucosa1.04e-1115
intestinal mucosa2.48e-1013
wall of intestine2.48e-1013
gastrointestinal system mucosa2.48e-1013
epithelium of mucosa7.31e-089
gastrointestinal system epithelium7.31e-089
intestinal epithelium7.31e-089







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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