FFCP PHASE1:Mm9::chr6:115708992..115709018,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=94346|HGNC=|MCL_coexpression_id=970|UniProt=Q4FJU9|association_with_transcript=0bp_to_ENSMUST00000072933,NM_144805,uc009dja.2_5end|description=CAGE_peak_1_at_Tmem40_5end|id=chr6:115708992..115709018,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!1.59e-08!23|ontology_enrichment_uberon_v019_2=UBERON:0000945,1.55e-07,16;UBERON:0010039,1.55e-07,16;UBERON:0003102,1.79e-07,22|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,6.99530499812892,7.69406016081339,6.29605690315332,0.788655413395594,0.685572168028694,1.69755860719212,0.765389611359628,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,8.89042942843484,14.1464901144451,0,0,0,0,102.958781161279,52.3494680830946,83.2402752918339,148.822566471847,90.1620040145148,68.4569597773927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0.186399445825301,0.757261933331841,0.68014404096107,0,0.860423876981386,0,0,0,0,4.63466586434781,0,0,0,0,0,0,0,8.01016851741492,7.34743609877786,7.58286667522175,1.1418387971906,0.258937883647172,0,0.867426633830679,1.52232739156071,0.691846491768175,1.65794904607885,0.705532242814229,0.125666591329675,0,0.289198713839823,17.6922110389975,1.45590164952668,5.52103796150984,6.78825354389311,0,0,0,0,10.543730956521,6.59893004092748,6.4805815807263,0,0,0,0,0,0,0,0.305518091550949,7.58882520721567,1.26361379216837,0.631325567659422,0.650602214813519,0.229902104433473,0.900310649026746,5.12396380641431,0.816437989815934,1.15302348256365,1.3118241438362,0.776110112217047,0.862271971731369,0.756424320671277,0.703804496655795,0.876782929710299,7.50727572909114,47.0140424804925,62.9693337408307,0.796137067273973,4.21327912387941,2.57347907114715,2.27330799516474,0.828503090142008,0,0.540186184383045,0,0.393528463494808,0.154267112887378,0.697601834251224,0.268273401399619,0,0,0,0.162137619091711,0,0.439100230582101,0.268412837520744,0,0,0,0,0.426576501070468,0.928946687441754,0.257734922644187,0,0.22237804384487,0.570676878337677,0,0,0,0,0,0,0,0,0.379335801906163,0.571242563048644,1.1270773567308,0.610953983535943,0.387904974335251,0.210407459670956,0.189709611372772,0.590440591918409,0.31399745568275,0.246794327843601,0,6.17326891149548,7.66580080941492,8.54476027062444,11.3601667977562,14.2294524253926,18.0784354764808,13.8094145976389,13.943629502653,5.49122826376163,2.87536413054709,1.86070473834252,0.936113019343682,0,0,0,1.66277871149944,0.947457058852424,0.162964976442026,0.169745085775188,0.469380496577004,1.00503754465089,0.714130922658041,3.12213836572478,1.89162172927429,1.10732344824387,0.637819074629948,6.22680595919804,1.03610989119537,1.73578870297814,0,0,0,0.827810238914197,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.712262414669021,0.325773918707152,0.329940245945071,0,0.971122544619926,0.302323556964751,0,0.295301892880773,0,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0.776152102696527,0,0.354680467284547,0,0.329098041204242,0.304464949114599,2.11204537257339,3.38931313382112,0.220528398054962,63.4812073824698,74.2736362801165,35.1624352331149,60.9992677856027,64.179091800319,0,0,5.98048082792484,3.30218988741156,14.6303676622072,11.1137389632768,4.78429797023588,3.43167259809784,30.4261389689001,22.9520381810799,25.7051951276228,29.5947891584685,0.158167996790568,1.82987520414164,10.0444966964275,38.8904230586912,53.7171906815597,34.9298657136686,17.4398791580459,25.3903263724509,0,6.83473244395618,0,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0,0,0,0,0,1.21635129174099,0.410843828659309,0.129920822977795,0,0.596044064343795,0.240390899039938,0,0.201932899896295,0.0762068066549998,0.100826185136841,0.292373642219257,0.0962118416403295,0,53.9618313004203,0,0.0897138566094757,0,10.6254276717705,7.13193406714492,3.84618410961257,87.0335619061007,4.01257683228291,0,0,0,0,0,0,0,0,0,0,0.207574695168353,1.19707462020309,3.07320490357441,5.10524105843418,2.30574478890781,5.69914876195044,8.66762238426299,6.38708677440572,5.77654577265267,7.58091635291392,9.88569269571935,7.54505365544305,5.80577346313271,5.76226371643823,5.28406314391642,5.71552429539688,3.47652977834566,4.43691207066522,6.1812885120496,4.85756436443511,12.0004238334895,6.92155644021416,8.10683045820891,7.1219744149841,6.30532848782715,6.34609559187574,6.40247905054704,6.31367307450823,5.83957689537206,7.2948495315506,6.28765596058123,4.53120618927592,7.7753898202241,4.95797891795091,23.5346065396992,14.2392029424629,20.3520499347505,16.3302001076707,12.6250299165437,9.9266138603782,2.55054619182464|short_description=p1@Tmem40}} | ||
|EntrezGene=94346 | |||
|HGNC= | |||
|MCL_coexpression_id=970 | |||
|UniProt=Q4FJU9 | |||
|association_with_transcript=0bp_to_ENSMUST00000072933,NM_144805,uc009dja.2_5end | |||
|description=CAGE_peak_1_at_Tmem40_5end | |||
|id=chr6:115708992..115709018,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.59e-08!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,1.55e-07,16;UBERON:0010039,1.55e-07,16;UBERON:0003102,1.79e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0.129123323441576,0,0,0,0,0,0,6.99530499812892,7.69406016081339,6.29605690315332,0.788655413395594,0.685572168028694,1.69755860719212,0.765389611359628,0.198581902401771,0.261199789138935,0,0,0,0,0,0,0,0,8.89042942843484,14.1464901144451,0,0,0,0,102.958781161279,52.3494680830946,83.2402752918339,148.822566471847,90.1620040145148,68.4569597773927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.135005938331691,0,0,0.220868540951614,0,0,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0.15279824777681,0,0,0.186399445825301,0.757261933331841,0.68014404096107,0,0.860423876981386,0,0,0,0,4.63466586434781,0,0,0,0,0,0,0,8.01016851741492,7.34743609877786,7.58286667522175,1.1418387971906,0.258937883647172,0,0.867426633830679,1.52232739156071,0.691846491768175,1.65794904607885,0.705532242814229,0.125666591329675,0,0.289198713839823,17.6922110389975,1.45590164952668,5.52103796150984,6.78825354389311,0,0,0,0,10.543730956521,6.59893004092748,6.4805815807263,0,0,0,0,0,0,0,0.305518091550949,7.58882520721567,1.26361379216837,0.631325567659422,0.650602214813519,0.229902104433473,0.900310649026746,5.12396380641431,0.816437989815934,1.15302348256365,1.3118241438362,0.776110112217047,0.862271971731369,0.756424320671277,0.703804496655795,0.876782929710299,7.50727572909114,47.0140424804925,62.9693337408307,0.796137067273973,4.21327912387941,2.57347907114715,2.27330799516474,0.828503090142008,0,0.540186184383045,0,0.393528463494808,0.154267112887378,0.697601834251224,0.268273401399619,0,0,0,0.162137619091711,0,0.439100230582101,0.268412837520744,0,0,0,0,0.426576501070468,0.928946687441754,0.257734922644187,0,0.22237804384487,0.570676878337677,0,0,0,0,0,0,0,0,0.379335801906163,0.571242563048644,1.1270773567308,0.610953983535943,0.387904974335251,0.210407459670956,0.189709611372772,0.590440591918409,0.31399745568275,0.246794327843601,0,6.17326891149548,7.66580080941492,8.54476027062444,11.3601667977562,14.2294524253926,18.0784354764808,13.8094145976389,13.943629502653,5.49122826376163,2.87536413054709,1.86070473834252,0.936113019343682,0,0,0,1.66277871149944,0.947457058852424,0.162964976442026,0.169745085775188,0.469380496577004,1.00503754465089,0.714130922658041,3.12213836572478,1.89162172927429,1.10732344824387,0.637819074629948,6.22680595919804,1.03610989119537,1.73578870297814,0,0,0,0.827810238914197,0,0.117211686592203,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.712262414669021,0.325773918707152,0.329940245945071,0,0.971122544619926,0.302323556964751,0,0.295301892880773,0,0.516856586336442,0.363533729477506,0.356497378384721,0,0,0,0,0.18006109403131,0.776152102696527,0,0.354680467284547,0,0.329098041204242,0.304464949114599,2.11204537257339,3.38931313382112,0.220528398054962,63.4812073824698,74.2736362801165,35.1624352331149,60.9992677856027,64.179091800319,0,0,5.98048082792484,3.30218988741156,14.6303676622072,11.1137389632768,4.78429797023588,3.43167259809784,30.4261389689001,22.9520381810799,25.7051951276228,29.5947891584685,0.158167996790568,1.82987520414164,10.0444966964275,38.8904230586912,53.7171906815597,34.9298657136686,17.4398791580459,25.3903263724509,0,6.83473244395618,0,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0.168956125490778,0.117357238645754,0,0,0,0,0,1.21635129174099,0.410843828659309,0.129920822977795,0,0.596044064343795,0.240390899039938,0,0.201932899896295,0.0762068066549998,0.100826185136841,0.292373642219257,0.0962118416403295,0,53.9618313004203,0,0.0897138566094757,0,10.6254276717705,7.13193406714492,3.84618410961257,87.0335619061007,4.01257683228291,0,0,0,0,0,0,0,0,0,0,0.207574695168353,1.19707462020309,3.07320490357441,5.10524105843418,2.30574478890781,5.69914876195044,8.66762238426299,6.38708677440572,5.77654577265267,7.58091635291392,9.88569269571935,7.54505365544305,5.80577346313271,5.76226371643823,5.28406314391642,5.71552429539688,3.47652977834566,4.43691207066522,6.1812885120496,4.85756436443511,12.0004238334895,6.92155644021416,8.10683045820891,7.1219744149841,6.30532848782715,6.34609559187574,6.40247905054704,6.31367307450823,5.83957689537206,7.2948495315506,6.28765596058123,4.53120618927592,7.7753898202241,4.95797891795091,23.5346065396992,14.2392029424629,20.3520499347505,16.3302001076707,12.6250299165437,9.9266138603782,2.55054619182464 | |||
|short_description=p1@Tmem40 | |||
}} | |||
Revision as of 08:36, 14 September 2013
| Short description: | p1@Tmem40 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Tmem40_5end |
| Coexpression cluster: | MCL_coexpression_mm9:970 |
| Association with transcript: | 0bp_to_ENSMUST00000072933, NM_144805, uc009dja.2_5end |
| EntrezGene: | Tmem40 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| stomach | 1.55e-07 | 16 |
| food storage organ | 1.55e-07 | 16 |
| surface structure | 1.79e-07 | 22 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
