FFCP PHASE1:Mm9::chr6:124946809..124946860,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=319352|HGNC=|MCL_coexpression_id=1|UniProt=Q6P1B3|association_with_transcript=71bp_to_NM_175696,uc009dst.2_5end|description=CAGE_peak_2_at_C530028O21Rik_5end|id=chr6:124946809..124946860,+|ontology_enrichment_celltype=CL:0000117!1.26e-11!23;CL:0000337!1.26e-11!23;CL:0000055!2.09e-10!50;CL:0000393!1.12e-09!39;CL:0000211!1.12e-09!39;CL:0002319!1.82e-09!43;CL:0000221!4.73e-09!44;CL:0000133!4.73e-09!44;CL:0000540!1.13e-08!33;CL:0000047!1.13e-08!33;CL:0000031!1.13e-08!33;CL:0000404!1.13e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,3.41e-13,23;CL:0000337,3.41e-13,23;CL:0000393,1.14e-09,39;CL:0000211,1.14e-09,39;CL:0002319,2.03e-09,43;CL:0000221,6.63e-09,44;CL:0000133,6.63e-09,44;CL:0000540,1.68e-08,33;CL:0000047,1.68e-08,33;CL:0000031,1.68e-08,33;CL:0000404,1.68e-08,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.19e-24!73;UBERON:0005743!1.19e-24!73;UBERON:0000073!2.69e-24!75;UBERON:0001016!2.69e-24!75;UBERON:0001049!2.85e-23!52;UBERON:0005068!2.85e-23!52;UBERON:0006241!2.85e-23!52;UBERON:0007135!2.85e-23!52;UBERON:0000955!2.13e-22!50;UBERON:0006238!2.13e-22!50;UBERON:0002346!2.97e-22!71;UBERON:0003075!2.97e-22!71;UBERON:0007284!2.97e-22!71;UBERON:0004121!6.30e-22!102;UBERON:0000924!6.30e-22!102;UBERON:0006601!6.30e-22!102;UBERON:0002616!1.24e-21!49;UBERON:0000033!3.41e-20!63;UBERON:0002020!2.76e-18!34;UBERON:0003080!5.95e-17!40;UBERON:0003056!1.11e-16!49;UBERON:0002780!2.87e-16!39;UBERON:0001890!2.87e-16!39;UBERON:0006240!2.87e-16!39;UBERON:0002791!1.44e-15!29;UBERON:0003528!1.44e-15!29;UBERON:0001893!1.44e-15!29;UBERON:0000153!6.54e-14!94;UBERON:0007811!1.22e-11!86;UBERON:0000956!3.50e-11!21;UBERON:0001869!3.50e-11!21;UBERON:0000203!3.50e-11!21;UBERON:0002619!2.21e-09!17;UBERON:0002021!8.06e-08!10;UBERON:0000411!8.06e-08!10;UBERON:0001950!8.06e-08!10;UBERON:0003076!5.61e-07!12;UBERON:0003057!5.61e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.34e-27,54;UBERON:0001017,5.49e-26,73;UBERON:0001049,1.29e-25,52;UBERON:0005068,1.29e-25,52;UBERON:0006241,1.29e-25,52;UBERON:0007135,1.29e-25,52;UBERON:0001016,3.30e-25,75;UBERON:0002346,6.47e-24,64;UBERON:0003075,6.47e-24,64;UBERON:0007284,6.47e-24,64;UBERON:0010371,5.88e-23,73;UBERON:0000955,2.07e-22,47;UBERON:0006238,2.07e-22,47;UBERON:0004121,5.86e-22,95;UBERON:0000924,5.86e-22,95;UBERON:0006601,5.86e-22,95;UBERON:0002616,1.49e-21,46;UBERON:0002020,6.74e-21,34;UBERON:0003080,2.30e-18,40;UBERON:0003528,9.40e-18,29;UBERON:0002791,9.40e-18,29;UBERON:0001893,9.40e-18,29;UBERON:0002780,1.38e-17,39;UBERON:0001890,1.38e-17,39;UBERON:0006240,1.38e-17,39;UBERON:0003056,5.08e-17,49;UBERON:0010314,5.53e-14,92;UBERON:0000956,1.11e-12,21;UBERON:0001869,1.11e-12,21;UBERON:0000203,1.11e-12,21;UBERON:0002619,1.33e-10,17;UBERON:0002021,8.46e-09,10;UBERON:0000411,8.46e-09,10;UBERON:0001950,8.46e-09,10;UBERON:0003076,7.93e-08,12;UBERON:0003057,7.93e-08,12|phase1_expression=4.80446541314382,0,0,0,0.500895729946347,1.00727563147134,0.467225281191051,6.32704284863724,0,0.468129052643987,0,0.398860794976682,0,1.39872643870396,0.999329285446988,0,0.699561878128147,0.157731082679119,0,0.42438965179803,9.0145887560134,0,0,0.47997726838022,0.45881856213434,0.57423196411502,0,0.215471232685889,0.190023419456374,0.504060259519861,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,3.24406179902447,4.03802854755699,6.25913075478431,2.61630187656536,5.05278220289285,1.74986909166855,4.61955191363696,0,0,0,0,3.60163210450326,4.58453503902011,1.03134418455488,8.6996078169627,10.5798195854407,6.97214543856797,1.69422266034566,1.77858959222228,7.19919773825119,15.8218618010716,16.3410426437603,9.58720353658895,3.84218305321555,6.32506635081714,6.34527910158946,6.52007380189284,14.568200204594,14.3564551618549,4.40966877173835,4.60058260887535,2.75765635983006,24.2254938198655,26.4312789836339,25.0378649207677,8.83638127792299,11.4359554503012,8.33461392890816,24.2889209131201,26.449842671489,24.2949213965128,19.1508580557884,14.6642831223076,12.4887628702951,0.605809546665472,1.66257432234928,0,0.860423876981386,0,0,0,0,2.94933282276679,1.53387290320252,0.779358013808606,1.06001872353102,0.281686839553361,2.56652954828636,7.64415719119937,0,0,0,0,1.94112595522402,2.84831672011889,5.49235914539852,1.04091196059682,1.21786191324856,0.922461989024234,1.05505848386836,1.64624189989987,0.753999547978053,0.741584903203122,0.722996784599558,0,0.485300549842228,0,0.484875253135222,0,12.296793474485,11.3101221679266,0.255457055208591,0,0,0,47.6334233307336,57.6450759551469,13.8219787324151,60.4908634269122,38.1016031422192,45.9211578476628,32.772735139687,5.39748628406676,0.497627882440372,1.0108910337347,2.94618598241064,0.520481771850815,0.459804208866946,0.720248519221397,1.35634336052144,2.10913147369116,3.20284300712124,3.37326208415024,6.98499100995342,1.94011193639558,2.83659120251729,5.98233822157426,6.1374805079721,6.11703948296315,6.96504333044333,4.7329891373827,0.199034266818493,0,0,0,0,0,0.54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| ||
|EntrezGene=319352 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q6P1B3 | |||
|association_with_transcript=71bp_to_NM_175696,uc009dst.2_5end | |||
|description=CAGE_peak_2_at_C530028O21Rik_5end | |||
|id=chr6:124946809..124946860,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.26e-11!23;CL:0000337!1.26e-11!23;CL:0000055!2.09e-10!50;CL:0000393!1.12e-09!39;CL:0000211!1.12e-09!39;CL:0002319!1.82e-09!43;CL:0000221!4.73e-09!44;CL:0000133!4.73e-09!44;CL:0000540!1.13e-08!33;CL:0000047!1.13e-08!33;CL:0000031!1.13e-08!33;CL:0000404!1.13e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.41e-13,23;CL:0000337,3.41e-13,23;CL:0000393,1.14e-09,39;CL:0000211,1.14e-09,39;CL:0002319,2.03e-09,43;CL:0000221,6.63e-09,44;CL:0000133,6.63e-09,44;CL:0000540,1.68e-08,33;CL:0000047,1.68e-08,33;CL:0000031,1.68e-08,33;CL:0000404,1.68e-08,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.19e-24!73;UBERON:0005743!1.19e-24!73;UBERON:0000073!2.69e-24!75;UBERON:0001016!2.69e-24!75;UBERON:0001049!2.85e-23!52;UBERON:0005068!2.85e-23!52;UBERON:0006241!2.85e-23!52;UBERON:0007135!2.85e-23!52;UBERON:0000955!2.13e-22!50;UBERON:0006238!2.13e-22!50;UBERON:0002346!2.97e-22!71;UBERON:0003075!2.97e-22!71;UBERON:0007284!2.97e-22!71;UBERON:0004121!6.30e-22!102;UBERON:0000924!6.30e-22!102;UBERON:0006601!6.30e-22!102;UBERON:0002616!1.24e-21!49;UBERON:0000033!3.41e-20!63;UBERON:0002020!2.76e-18!34;UBERON:0003080!5.95e-17!40;UBERON:0003056!1.11e-16!49;UBERON:0002780!2.87e-16!39;UBERON:0001890!2.87e-16!39;UBERON:0006240!2.87e-16!39;UBERON:0002791!1.44e-15!29;UBERON:0003528!1.44e-15!29;UBERON:0001893!1.44e-15!29;UBERON:0000153!6.54e-14!94;UBERON:0007811!1.22e-11!86;UBERON:0000956!3.50e-11!21;UBERON:0001869!3.50e-11!21;UBERON:0000203!3.50e-11!21;UBERON:0002619!2.21e-09!17;UBERON:0002021!8.06e-08!10;UBERON:0000411!8.06e-08!10;UBERON:0001950!8.06e-08!10;UBERON:0003076!5.61e-07!12;UBERON:0003057!5.61e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.34e-27,54;UBERON:0001017,5.49e-26,73;UBERON:0001049,1.29e-25,52;UBERON:0005068,1.29e-25,52;UBERON:0006241,1.29e-25,52;UBERON:0007135,1.29e-25,52;UBERON:0001016,3.30e-25,75;UBERON:0002346,6.47e-24,64;UBERON:0003075,6.47e-24,64;UBERON:0007284,6.47e-24,64;UBERON:0010371,5.88e-23,73;UBERON:0000955,2.07e-22,47;UBERON:0006238,2.07e-22,47;UBERON:0004121,5.86e-22,95;UBERON:0000924,5.86e-22,95;UBERON:0006601,5.86e-22,95;UBERON:0002616,1.49e-21,46;UBERON:0002020,6.74e-21,34;UBERON:0003080,2.30e-18,40;UBERON:0003528,9.40e-18,29;UBERON:0002791,9.40e-18,29;UBERON:0001893,9.40e-18,29;UBERON:0002780,1.38e-17,39;UBERON:0001890,1.38e-17,39;UBERON:0006240,1.38e-17,39;UBERON:0003056,5.08e-17,49;UBERON:0010314,5.53e-14,92;UBERON:0000956,1.11e-12,21;UBERON:0001869,1.11e-12,21;UBERON:0000203,1.11e-12,21;UBERON:0002619,1.33e-10,17;UBERON:0002021,8.46e-09,10;UBERON:0000411,8.46e-09,10;UBERON:0001950,8.46e-09,10;UBERON:0003076,7.93e-08,12;UBERON:0003057,7.93e-08,12 | |||
|phase1_expression=4.80446541314382,0,0,0,0.500895729946347,1.00727563147134,0.467225281191051,6.32704284863724,0,0.468129052643987,0,0.398860794976682,0,1.39872643870396,0.999329285446988,0,0.699561878128147,0.157731082679119,0,0.42438965179803,9.0145887560134,0,0,0.47997726838022,0.45881856213434,0.57423196411502,0,0.215471232685889,0.190023419456374,0.504060259519861,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,2.39203954153597,3.24406179902447,4.03802854755699,6.25913075478431,2.61630187656536,5.05278220289285,1.74986909166855,4.61955191363696,0,0,0,0,3.60163210450326,4.58453503902011,1.03134418455488,8.6996078169627,10.5798195854407,6.97214543856797,1.69422266034566,1.77858959222228,7.19919773825119,15.8218618010716,16.3410426437603,9.58720353658895,3.84218305321555,6.32506635081714,6.34527910158946,6.52007380189284,14.568200204594,14.3564551618549,4.40966877173835,4.60058260887535,2.75765635983006,24.2254938198655,26.4312789836339,25.0378649207677,8.83638127792299,11.4359554503012,8.33461392890816,24.2889209131201,26.449842671489,24.2949213965128,19.1508580557884,14.6642831223076,12.4887628702951,0.605809546665472,1.66257432234928,0,0.860423876981386,0,0,0,0,2.94933282276679,1.53387290320252,0.779358013808606,1.06001872353102,0.281686839553361,2.56652954828636,7.64415719119937,0,0,0,0,1.94112595522402,2.84831672011889,5.49235914539852,1.04091196059682,1.21786191324856,0.922461989024234,1.05505848386836,1.64624189989987,0.753999547978053,0.741584903203122,0.722996784599558,0,0.485300549842228,0,0.484875253135222,0,12.296793474485,11.3101221679266,0.255457055208591,0,0,0,47.6334233307336,57.6450759551469,13.8219787324151,60.4908634269122,38.1016031422192,45.9211578476628,32.772735139687,5.39748628406676,0.497627882440372,1.0108910337347,2.94618598241064,0.520481771850815,0.459804208866946,0.720248519221397,1.35634336052144,2.10913147369116,3.20284300712124,3.37326208415024,6.98499100995342,1.94011193639558,2.83659120251729,5.98233822157426,6.1374805079721,6.11703948296315,6.96504333044333,4.7329891373827,0.199034266818493,0,0,0,0,0,0.540186184383045,0,0.196764231747404,0.154267112887378,0,0,0,0,0.492502392237286,0.56748166682099,0.292399974850665,0,0.134206418760372,40.5859600728766,7.82075054082562,0.660837565967596,1.58670339998127,0.213288250535234,0.232236671860439,0.38660238396628,0,0.444756087689741,0.380451252225118,0.949058123089023,0.494096864172033,0.502670417600539,0.795825888164603,0.974820435595601,0,0.432276099749388,0.398282546508734,0,0.228497025219458,1.1270773567308,0,0.387904974335251,0.350679099451593,0.569128834118316,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,2.87536413054709,0,0,0,0.179397413521912,0,0.369506380333209,0,0.162964976442026,0.509235257325564,0.234690248288502,0,0,0,0.630540576424764,0.44292937929755,0.478364305972461,0.81931657357869,0.345369963731791,0.289298117163023,16.5870412333199,8.70249094109935,0,0,29.0596567877903,20.3948334670434,3.11476396215683,0,1.26203287766503,1.95219372148319,1.29254038639679,0.238968797952552,0.222798674082394,0.283076530788832,0.809621403349789,0.876767573733936,0.395287777946524,62.6576567022524,0.709700426041343,5.87616492101942,5.70104357737516,5.1140738121486,0,0.242780636154981,0,0.754420319023592,0.295301892880773,0.614870295887855,0,0,0.356497378384721,0,0,0,20.4263763452273,0.18006109403131,0.646793418913773,0.643011105094777,2.30542303734956,2.14042581122485,3.78462747384878,5.48036908406279,0,1.69465656691056,0.220528398054962,2.4732937941222,4.19807509409354,3.1362720962641,2.14870219205646,1.47726809770555,0.291480836629851,26.8866687915239,0.341741761595705,0.619160603889667,0.740778109478847,0,0.410082683163076,0,0,0,0,1.90934123603023,0.316335993581135,0.813277868507395,0.86404272657441,1.04544148007234,2.18362563746178,2.02296519577231,2.64491058321075,1.57053565190418,0.777689839750757,0,0,0.747582730219894,0.66183396182839,2.91676782516071,2.45403664607689,1.68956125490778,2.69921648885234,1.69265700297135,0.838874755405687,0.241584120826006,0.288030006257865,1.26404448251271,1.01362607645082,0.308132871494482,0.25984164595559,0.358053391334963,0,0.360586348559907,0.147689527174577,0.302899349844443,0.0762068066549998,0.302478555410522,0.0974578807397524,0.481059208201647,0.116876902181569,0.226730383615211,8.87943813496259,2.06341870201794,2.01461539636894,8.88672132548076,3.75364950902364,2.74727436400898,2.57242054894879,1.50471631210609,23.7195773899168,30.8417908459809,26.3531936182122,25.0905646221784,45.2154463048624,45.323633843382,49.2766425169218,54.9391867933549,53.9239466691203,50.7405105516784,0,0.399024873401031,1.53660245178721,2.18796045361465,1.67690530102386,3.30918315210025,2.889207461421,2.47242068686673,2.24643446714271,2.77966932940177,2.78827229879264,2.64076877940507,3.65201879132541,3.52138338226781,2.98664438569189,3.33405583898152,3.70829843023538,2.89363830695558,2.88460130562315,1.17759136107518,3.08582327146874,2.30718548007139,1.66905332963125,2.32554266611726,1.78807822789128,2.284594413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| |||
|short_description=p2@C530028O21Rik | |||
}} |
Revision as of 08:53, 14 September 2013
Short description: | p2@C530028O21Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_C530028O21Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 71bp_to_NM_175696, uc009dst.2_5end |
EntrezGene: | C530028O21Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.41e-13 | 23 |
neuroblast (sensu Vertebrata) | 3.41e-13 | 23 |
electrically responsive cell | 1.14e-09 | 39 |
electrically active cell | 1.14e-09 | 39 |
neural cell | 2.03e-09 | 43 |
ectodermal cell | 6.63e-09 | 44 |
neurectodermal cell | 6.63e-09 | 44 |
neuron | 1.68e-08 | 33 |
neuronal stem cell | 1.68e-08 | 33 |
neuroblast | 1.68e-08 | 33 |
electrically signaling cell | 1.68e-08 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.